RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 GNAI1P63096 354 aa4.22□□□□□ -1.73
HMGB3P12-201ENST00000438745 EMC10Q5UCC4 262 aa4.22□□□□□ -1.73
HMGB3P12-201ENST00000438745 KAZNQ674X7 775 aa4.22□□□□□ -1.73
HMGB3P12-201ENST00000438745 TSHZ1Q6ZSZ6 1077 aa4.22□□□□□ -1.73
HMGB3P12-201ENST00000438745 PPP1R3BQ86XI6 285 aa4.22□□□□□ -1.73
HMGB3P12-201ENST00000438745 FAM9AQ8IZU1 332 aaPredicted RBP4.22□□□□□ -1.73
HMGB3P12-201ENST00000438745 FAM109AQ8N4B1 249 aa4.22□□□□□ -1.73
HMGB3P12-201ENST00000438745 BOLLQ8N9W6 283 aaKnown RBP4.22□□□□□ -1.73
HMGB3P12-201ENST00000438745 NELL1Q92832 810 aa4.22□□□□□ -1.73
HMGB3P12-201ENST00000438745 VOPP1Q96AW1 172 aa4.22□□□□□ -1.73
HMGB3P12-201ENST00000438745 RGMAQ96B86 450 aa4.22□□□□□ -1.73
HMGB3P12-201ENST00000438745 MVB12AQ96EY5 273 aa4.22□□□□□ -1.73
HMGB3P12-201ENST00000438745 MRPS18AQ9NVS2 196 aaKnown RBP4.22□□□□□ -1.73
HMGB3P12-201ENST00000438745 PNPOQ9NVS9 261 aa4.22□□□□□ -1.73
HMGB3P12-201ENST00000438745 ABCF2Q9UG63 623 aa4.22□□□□□ -1.73
HMGB3P12-201ENST00000438745 ENTPD2Q9Y5L3 495 aa4.22□□□□□ -1.73
HMGB3P12-201ENST00000438745 ZNF785A8K8V0 405 aa4.21□□□□□ -1.74
HMGB3P12-201ENST00000438745 VWC2LB2RUY7 222 aa4.21□□□□□ -1.74
HMGB3P12-201ENST00000438745 AP1G1O43747 822 aa4.21□□□□□ -1.74
HMGB3P12-201ENST00000438745 RFPL1O75677 317 aa4.21□□□□□ -1.74
HMGB3P12-201ENST00000438745 FTLP02792 175 aaPredicted RBP4.21□□□□□ -1.74
HMGB3P12-201ENST00000438745 MYBP10242 640 aa4.21□□□□□ -1.74
HMGB3P12-201ENST00000438745 PPP3CBP16298 524 aa4.21□□□□□ -1.74
HMGB3P12-201ENST00000438745 NPTX2P47972 431 aa4.21□□□□□ -1.74
HMGB3P12-201ENST00000438745 MAPK10P53779 464 aa4.21□□□□□ -1.74
HMGB3P12-201ENST00000438745 C21orf58P58505 322 aa4.21□□□□□ -1.74
HMGB3P12-201ENST00000438745 PSMC1P62191 440 aaKnown RBP4.21□□□□□ -1.74
HMGB3P12-201ENST00000438745 ZNF267Q14586 743 aaPredicted RBP4.21□□□□□ -1.74
HMGB3P12-201ENST00000438745 IFIT1BQ5T764 474 aaKnown RBP4.21□□□□□ -1.74
HMGB3P12-201ENST00000438745 FAM102BQ5T8I3 360 aa4.21□□□□□ -1.74
HMGB3P12-201ENST00000438745 TAF2Q6P1X5 1199 aa4.21□□□□□ -1.74
HMGB3P12-201ENST00000438745 USP37Q86T82 979 aa4.21□□□□□ -1.74
HMGB3P12-201ENST00000438745 MYCBPAPQ8TBZ2 947 aa4.21□□□□□ -1.74
HMGB3P12-201ENST00000438745 DDX17Q92841 729 aaKnown RBP4.21□□□□□ -1.74
HMGB3P12-201ENST00000438745 CAMKK2Q96RR4 588 aa4.21□□□□□ -1.74
HMGB3P12-201ENST00000438745 CNPPD1Q9BV87 410 aa4.21□□□□□ -1.74
HMGB3P12-201ENST00000438745 SIK2Q9H0K1 926 aa4.21□□□□□ -1.74
HMGB3P12-201ENST00000438745 SLC12A5Q9H2X9 1139 aa4.21□□□□□ -1.74
HMGB3P12-201ENST00000438745 KMT5AQ9NQR1 393 aa4.21□□□□□ -1.74
HMGB3P12-201ENST00000438745 KLC4Q9NSK0 619 aa4.21□□□□□ -1.74
HMGB3P12-201ENST00000438745 LMBRD1Q9NUN5 540 aa4.21□□□□□ -1.74
HMGB3P12-201ENST00000438745 PNMA8BQ9ULN7 279 aaPredicted RBP4.21□□□□□ -1.74
HMGB3P12-201ENST00000438745 UHRF1BP1LA0JNW5 1464 aa4.21□□□□□ -1.74
HMGB3P12-201ENST00000438745 PTPRKQ15262 1439 aa4.21□□□□□ -1.74
HMGB3P12-201ENST00000438745 NCOA1Q15788 1441 aa4.21□□□□□ -1.74
HMGB3P12-201ENST00000438745 AKNAQ7Z591 1439 aa4.21□□□□□ -1.74
HMGB3P12-201ENST00000438745 A0A0B4J269 797 aa4.2□□□□□ -1.74
HMGB3P12-201ENST00000438745 ADM5C9JUS6 153 aa4.2□□□□□ -1.74
HMGB3P12-201ENST00000438745 TOR1BO14657 336 aa4.2□□□□□ -1.74
HMGB3P12-201ENST00000438745 TRIAP1O43715 76 aa4.2□□□□□ -1.74
HMGB3P12-201ENST00000438745 ITPKBP27987 946 aa4.2□□□□□ -1.74
HMGB3P12-201ENST00000438745 CD38P28907 300 aa4.2□□□□□ -1.74
HMGB3P12-201ENST00000438745 ZNF135P52742 658 aaPredicted RBP4.2□□□□□ -1.74
HMGB3P12-201ENST00000438745 ITIH3Q06033 890 aa4.2□□□□□ -1.74
HMGB3P12-201ENST00000438745 TUBB3Q13509 450 aa4.2□□□□□ -1.74
HMGB3P12-201ENST00000438745 PLS1Q14651 629 aa4.2□□□□□ -1.74
HMGB3P12-201ENST00000438745 TXNRD1Q16881 649 aa4.2□□□□□ -1.74
HMGB3P12-201ENST00000438745 HSP90AB2PQ58FF8 381 aa4.2□□□□□ -1.74
HMGB3P12-201ENST00000438745 SLC30A10Q6XR72 485 aa4.2□□□□□ -1.74
HMGB3P12-201ENST00000438745 PEG10Q86TG7 708 aaKnown RBP4.2□□□□□ -1.74
HMGB3P12-201ENST00000438745 GRAMD1CQ8IYS0 662 aa4.2□□□□□ -1.74
HMGB3P12-201ENST00000438745 PSD4Q8NDX1 1056 aa4.2□□□□□ -1.74
HMGB3P12-201ENST00000438745 TFAP2BQ92481 460 aa4.2□□□□□ -1.74
HMGB3P12-201ENST00000438745 C1GALT1C1Q96EU7 318 aa4.2□□□□□ -1.74
HMGB3P12-201ENST00000438745 FBXL20Q96IG2 436 aa4.2□□□□□ -1.74
HMGB3P12-201ENST00000438745 UROC1Q96N76 676 aa4.2□□□□□ -1.74
HMGB3P12-201ENST00000438745 TINAGL1Q9GZM7 467 aaPredicted RBP4.2□□□□□ -1.74
HMGB3P12-201ENST00000438745 KLK15Q9H2R5 256 aa4.2□□□□□ -1.74
HMGB3P12-201ENST00000438745 SMOC2Q9H3U7 446 aa4.2□□□□□ -1.74
HMGB3P12-201ENST00000438745 ANLNQ9NQW6 1124 aa4.2□□□□□ -1.74
HMGB3P12-201ENST00000438745 ARPP21Q9UBL0 812 aaPredicted RBP4.2□□□□□ -1.74
HMGB3P12-201ENST00000438745 KDM5BQ9UGL1 1544 aa4.2□□□□□ -1.74
HMGB3P12-201ENST00000438745 SETD1BQ9UPS6 1966 aaKnown RBP4.2□□□□□ -1.74
HMGB3P12-201ENST00000438745 ADGRA2Q96PE1 1338 aa4.2□□□□□ -1.74
HMGB3P12-201ENST00000438745 TTC37Q6PGP7 1564 aa4.19□□□□□ -1.74
HMGB3P12-201ENST00000438745 KAT6AQ92794 2004 aa4.19□□□□□ -1.74
HMGB3P12-201ENST00000438745 LRRC3CA6NJW4 275 aa4.19□□□□□ -1.74
HMGB3P12-201ENST00000438745 F5H697 171 aa4.19□□□□□ -1.74
HMGB3P12-201ENST00000438745 MASP2O00187 686 aa4.19□□□□□ -1.74
HMGB3P12-201ENST00000438745 OFD1O75665 1012 aa4.19□□□□□ -1.74
HMGB3P12-201ENST00000438745 KIF20AO95235 890 aa4.19□□□□□ -1.74
HMGB3P12-201ENST00000438745 AHSGP02765 367 aa4.19□□□□□ -1.74
HMGB3P12-201ENST00000438745 ALDH2P05091 517 aa4.19□□□□□ -1.74
HMGB3P12-201ENST00000438745 PHKA1P46020 1223 aa4.19□□□□□ -1.74
HMGB3P12-201ENST00000438745 NDUFV1P49821 464 aa4.19□□□□□ -1.74
HMGB3P12-201ENST00000438745 SOX10P56693 466 aa4.19□□□□□ -1.74
HMGB3P12-201ENST00000438745 BOP1Q14137 746 aaKnown RBP4.19□□□□□ -1.74
HMGB3P12-201ENST00000438745 EPM2AIP1Q7L775 607 aaPredicted RBP4.19□□□□□ -1.74
HMGB3P12-201ENST00000438745 GRASPQ7Z6J2 395 aaPredicted RBP4.19□□□□□ -1.74
HMGB3P12-201ENST00000438745 TCEAL8Q8IYN2 117 aa4.19□□□□□ -1.74
HMGB3P12-201ENST00000438745 MAGEB6Q8N7X4 407 aa4.19□□□□□ -1.74
HMGB3P12-201ENST00000438745 TTC8Q8TAM2 541 aa4.19□□□□□ -1.74
HMGB3P12-201ENST00000438745 TNPO1Q92973 898 aaKnown RBP4.19□□□□□ -1.74
HMGB3P12-201ENST00000438745 RFKQ969G6 155 aa4.19□□□□□ -1.74
HMGB3P12-201ENST00000438745 CDK5RAP3Q96JB5 506 aa4.19□□□□□ -1.74
HMGB3P12-201ENST00000438745 HEPHQ9BQS7 1158 aa4.19□□□□□ -1.74
HMGB3P12-201ENST00000438745 KIAA1586Q9HCI6 787 aa4.19□□□□□ -1.74
HMGB3P12-201ENST00000438745 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.19□□□□□ -1.74
HMGB3P12-201ENST00000438745 FEZ2Q9UHY8 353 aaPredicted RBP4.19□□□□□ -1.74
HMGB3P12-201ENST00000438745 PCDHA1Q9Y5I3 950 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms