RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 SPATA2LQ8IUW3 424 aaPredicted RBP26.46■■□□□ 1.83
RAPGEF1-206ENST00000438647 PI4K2AQ9BTU6 479 aa26.46■■□□□ 1.83
RAPGEF1-206ENST00000438647 LRRC3Q9BY71 257 aa26.46■■□□□ 1.83
RAPGEF1-206ENST00000438647 MFSD1Q9H3U5 465 aa26.46■■□□□ 1.83
RAPGEF1-206ENST00000438647 WNT16Q9UBV4 365 aa26.46■■□□□ 1.83
RAPGEF1-206ENST00000438647 ECI2O75521 394 aa26.45■■□□□ 1.82
RAPGEF1-206ENST00000438647 EPB41P11171 864 aaKnown RBP26.45■■□□□ 1.82
RAPGEF1-206ENST00000438647 P4HA1P13674 534 aa26.45■■□□□ 1.82
RAPGEF1-206ENST00000438647 GNL1P36915 607 aaPredicted RBP26.45■■□□□ 1.82
RAPGEF1-206ENST00000438647 CDR1P51861 262 aa26.45■■□□□ 1.82
RAPGEF1-206ENST00000438647 RPL10AP62906 217 aaKnown RBP26.45■■□□□ 1.82
RAPGEF1-206ENST00000438647 SGSM1Q2NKQ1 1148 aa26.45■■□□□ 1.82
RAPGEF1-206ENST00000438647 FAM171BQ6P995 826 aa26.45■■□□□ 1.82
RAPGEF1-206ENST00000438647 SV2AQ7L0J3 742 aa26.45■■□□□ 1.82
RAPGEF1-206ENST00000438647 OR6B3Q8NGW1 331 aa26.45■■□□□ 1.82
RAPGEF1-206ENST00000438647 SHKBP1Q8TBC3 707 aa26.45■■□□□ 1.82
RAPGEF1-206ENST00000438647 TAF4BQ92750 862 aa26.45■■□□□ 1.82
RAPGEF1-206ENST00000438647 LPIN3Q9BQK8 851 aa26.45■■□□□ 1.82
RAPGEF1-206ENST00000438647 SLITRK6Q9H5Y7 841 aa26.45■■□□□ 1.82
RAPGEF1-206ENST00000438647 SLC2A4RGQ9NR83 387 aa26.45■■□□□ 1.82
RAPGEF1-206ENST00000438647 A0A1W2PRU2 124 aa26.44■■□□□ 1.82
RAPGEF1-206ENST00000438647 MYBPHLA2RUH7 354 aa26.44■■□□□ 1.82
RAPGEF1-206ENST00000438647 MOSPD3O75425 235 aa26.44■■□□□ 1.82
RAPGEF1-206ENST00000438647 LMO2P25791 158 aa26.44■■□□□ 1.82
RAPGEF1-206ENST00000438647 LRRC63Q05C16 580 aa26.44■■□□□ 1.82
RAPGEF1-206ENST00000438647 TEAD2Q15562 447 aa26.44■■□□□ 1.82
RAPGEF1-206ENST00000438647 ST13P5Q8NFI4 369 aaPredicted RBP26.44■■□□□ 1.82
RAPGEF1-206ENST00000438647 GCNAQ96QF7 691 aa26.44■■□□□ 1.82
RAPGEF1-206ENST00000438647 KXD1Q9BQD3 176 aa26.44■■□□□ 1.82
RAPGEF1-206ENST00000438647 MRPL45Q9BRJ2 306 aaKnown RBP26.44■■□□□ 1.82
RAPGEF1-206ENST00000438647 RPP25Q9BUL9 199 aaKnown RBP26.44■■□□□ 1.82
RAPGEF1-206ENST00000438647 ARIH1Q9Y4X5 557 aaPredicted RBP26.44■■□□□ 1.82
RAPGEF1-206ENST00000438647 PSMA7O14818 248 aa26.43■■□□□ 1.82
RAPGEF1-206ENST00000438647 HCRTO43612 131 aa26.43■■□□□ 1.82
RAPGEF1-206ENST00000438647 VNN1O95497 513 aa26.43■■□□□ 1.82
RAPGEF1-206ENST00000438647 CFHP08603 1231 aa26.43■■□□□ 1.82
RAPGEF1-206ENST00000438647 PDGFRBP09619 1106 aa26.43■■□□□ 1.82
RAPGEF1-206ENST00000438647 GABRR2P28476 465 aa26.43■■□□□ 1.82
RAPGEF1-206ENST00000438647 CDC25CP30307 473 aa26.43■■□□□ 1.82
RAPGEF1-206ENST00000438647 PSMC1P62191 440 aaKnown RBP26.43■■□□□ 1.82
RAPGEF1-206ENST00000438647 FKBP3Q00688 224 aaKnown RBP26.43■■□□□ 1.82
RAPGEF1-206ENST00000438647 ADSSL1Q8N142 457 aa26.43■■□□□ 1.82
RAPGEF1-206ENST00000438647 GIPC2Q8TF65 315 aa26.43■■□□□ 1.82
RAPGEF1-206ENST00000438647 SMARCD2Q92925 531 aa26.43■■□□□ 1.82
RAPGEF1-206ENST00000438647 ELSPBP1Q96BH3 223 aa26.43■■□□□ 1.82
RAPGEF1-206ENST00000438647 ASB16Q96NS5 453 aa26.43■■□□□ 1.82
RAPGEF1-206ENST00000438647 IMPG2Q9BZV3 1241 aa26.43■■□□□ 1.82
RAPGEF1-206ENST00000438647 KCNH6Q9H252 994 aa26.43■■□□□ 1.82
RAPGEF1-206ENST00000438647 ZFP14Q9HCL3 533 aa26.43■■□□□ 1.82
RAPGEF1-206ENST00000438647 MAN1B1Q9UKM7 699 aa26.43■■□□□ 1.82
RAPGEF1-206ENST00000438647 ZDBF2Q9HCK1 2354 aa26.42■■□□□ 1.82
RAPGEF1-206ENST00000438647 CSH1P0DML2 217 aa26.42■■□□□ 1.82
RAPGEF1-206ENST00000438647 CSH2P0DML3 217 aa26.42■■□□□ 1.82
RAPGEF1-206ENST00000438647 GJA1P17302 382 aa26.42■■□□□ 1.82
RAPGEF1-206ENST00000438647 CYP2F1P24903 491 aa26.42■■□□□ 1.82
RAPGEF1-206ENST00000438647 PIK3CAP42336 1068 aa26.42■■□□□ 1.82
RAPGEF1-206ENST00000438647 ARHGAP15Q53QZ3 475 aa26.42■■□□□ 1.82
RAPGEF1-206ENST00000438647 FAM78AQ5JUQ0 283 aa26.42■■□□□ 1.82
RAPGEF1-206ENST00000438647 C1orf220Q5T0J3 134 aa26.42■■□□□ 1.82
RAPGEF1-206ENST00000438647 ATXN3LQ9H3M9 355 aa26.42■■□□□ 1.82
RAPGEF1-206ENST00000438647 ZNF334Q9HCZ1 680 aaPredicted RBP26.42■■□□□ 1.82
RAPGEF1-206ENST00000438647 MAGEC2Q9UBF1 373 aaPredicted RBP26.42■■□□□ 1.82
RAPGEF1-206ENST00000438647 A8MXQ7 604 aa26.41■■□□□ 1.82
RAPGEF1-206ENST00000438647 ATP2C2O75185 946 aa26.41■■□□□ 1.82
RAPGEF1-206ENST00000438647 PDGFBP01127 241 aaPredicted RBP26.41■■□□□ 1.82
RAPGEF1-206ENST00000438647 TRIM49P0CI25 452 aa26.41■■□□□ 1.82
RAPGEF1-206ENST00000438647 TRIM49CP0CI26 452 aa26.41■■□□□ 1.82
RAPGEF1-206ENST00000438647 GTF2H1P32780 548 aa26.41■■□□□ 1.82
RAPGEF1-206ENST00000438647 MAGEA11P43364 429 aa26.41■■□□□ 1.82
RAPGEF1-206ENST00000438647 PFKPQ01813 784 aa26.41■■□□□ 1.82
RAPGEF1-206ENST00000438647 VSTM1Q6UX27 236 aa26.41■■□□□ 1.82
RAPGEF1-206ENST00000438647 GAREM2Q75VX8 874 aa26.41■■□□□ 1.82
RAPGEF1-206ENST00000438647 SIX5Q8N196 739 aa26.41■■□□□ 1.82
RAPGEF1-206ENST00000438647 MYCBPAPQ8TBZ2 947 aa26.41■■□□□ 1.82
RAPGEF1-206ENST00000438647 GPR152Q8TDT2 470 aa26.41■■□□□ 1.82
RAPGEF1-206ENST00000438647 MYLPFQ96A32 169 aa26.41■■□□□ 1.82
RAPGEF1-206ENST00000438647 DHTKD1Q96HY7 919 aaPredicted RBP26.41■■□□□ 1.82
RAPGEF1-206ENST00000438647 CRTAC1Q9NQ79 661 aa26.41■■□□□ 1.82
RAPGEF1-206ENST00000438647 RAPGEFL1Q9UHV5 662 aa26.41■■□□□ 1.82
RAPGEF1-206ENST00000438647 ZMYM5Q9UJ78 669 aa26.41■■□□□ 1.82
RAPGEF1-206ENST00000438647 NRG2O14511 850 aaPredicted RBP26.4■■□□□ 1.82
RAPGEF1-206ENST00000438647 SLC16A3O15427 465 aaKnown RBP26.4■■□□□ 1.82
RAPGEF1-206ENST00000438647 STX10O60499 249 aa26.4■■□□□ 1.82
RAPGEF1-206ENST00000438647 ASS1P00966 412 aaKnown RBP26.4■■□□□ 1.82
RAPGEF1-206ENST00000438647 HLA-DRAP01903 254 aa26.4■■□□□ 1.82
RAPGEF1-206ENST00000438647 GCLMP48507 274 aa26.4■■□□□ 1.82
RAPGEF1-206ENST00000438647 CYP27A1Q02318 531 aa26.4■■□□□ 1.82
RAPGEF1-206ENST00000438647 TANGO2Q6ICL3 276 aa26.4■■□□□ 1.82
RAPGEF1-206ENST00000438647 POTEHQ6S545 545 aa26.4■■□□□ 1.82
RAPGEF1-206ENST00000438647 CCDC150Q8NCX0 1101 aa26.4■■□□□ 1.82
RAPGEF1-206ENST00000438647 ZSCAN18Q8TBC5 510 aaPredicted RBP26.4■■□□□ 1.82
RAPGEF1-206ENST00000438647 E2F7Q96AV8 911 aa26.4■■□□□ 1.82
RAPGEF1-206ENST00000438647 EEF2KMTQ96G04 330 aa26.4■■□□□ 1.82
RAPGEF1-206ENST00000438647 ZSWIM3Q96MP5 696 aa26.4■■□□□ 1.82
RAPGEF1-206ENST00000438647 SMYD3Q9H7B4 428 aa26.4■■□□□ 1.82
RAPGEF1-206ENST00000438647 TRPV4Q9HBA0 871 aa26.4■■□□□ 1.82
RAPGEF1-206ENST00000438647 TMEM8AQ9HCN3 771 aa26.4■■□□□ 1.82
RAPGEF1-206ENST00000438647 UXTQ9UBK9 157 aaPredicted RBP26.4■■□□□ 1.82
RAPGEF1-206ENST00000438647 FCARP24071 287 aa26.39■■□□□ 1.82
RAPGEF1-206ENST00000438647 CCNE1P24864 410 aa26.39■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms