RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 PUM1Q14671 1186 aaKnown RBP eCLIP19.56■□□□□ 0.723e-8■□□□□ 10.1
GTF3A-204ENST00000438571 POSTNQ15063 836 aa19.56■□□□□ 0.72
GTF3A-204ENST00000438571 TRIM68Q6AZZ1 485 aa19.56■□□□□ 0.72
GTF3A-204ENST00000438571 PKN3Q6P5Z2 889 aa19.56■□□□□ 0.72
GTF3A-204ENST00000438571 MAMSTRQ6ZN01 415 aa19.56■□□□□ 0.72
GTF3A-204ENST00000438571 PDILTQ8N807 584 aa19.56■□□□□ 0.72
GTF3A-204ENST00000438571 HPS3Q969F9 1004 aa19.56■□□□□ 0.72
GTF3A-204ENST00000438571 FAM126AQ9BYI3 521 aaPredicted RBP19.56■□□□□ 0.72
GTF3A-204ENST00000438571 PDE11AQ9HCR9 933 aa19.56■□□□□ 0.72
GTF3A-204ENST00000438571 OLFML3Q9NRN5 406 aa19.56■□□□□ 0.72
GTF3A-204ENST00000438571 SIX4Q9UIU6 781 aa19.56■□□□□ 0.72
GTF3A-204ENST00000438571 PCDHB5Q9Y5E4 795 aa19.56■□□□□ 0.72
GTF3A-204ENST00000438571 OTOL1A6NHN0 477 aaPredicted RBP19.55■□□□□ 0.72
GTF3A-204ENST00000438571 FGF19O95750 216 aa19.55■□□□□ 0.72
GTF3A-204ENST00000438571 PDCP20941 246 aa19.55■□□□□ 0.72
GTF3A-204ENST00000438571 TXLNAP40222 546 aa19.55■□□□□ 0.72
GTF3A-204ENST00000438571 NLRP12P59046 1061 aa19.55■□□□□ 0.72
GTF3A-204ENST00000438571 TXNDC8Q6A555 127 aa19.55■□□□□ 0.72
GTF3A-204ENST00000438571 HEATR6Q6AI08 1181 aaKnown RBP19.55■□□□□ 0.72
GTF3A-204ENST00000438571 PRR23BQ6ZRT6 265 aa19.55■□□□□ 0.72
GTF3A-204ENST00000438571 RALGPS2Q86X27 583 aaPredicted RBP19.55■□□□□ 0.72
GTF3A-204ENST00000438571 NT5DC4Q86YG4 428 aa19.55■□□□□ 0.72
GTF3A-204ENST00000438571 SPEM1Q8N4L4 309 aa19.55■□□□□ 0.72
GTF3A-204ENST00000438571 MAB21L3Q8N8X9 362 aa19.55■□□□□ 0.72
GTF3A-204ENST00000438571 C2orf15Q8WU43 125 aaKnown RBP19.55■□□□□ 0.72
GTF3A-204ENST00000438571 MSANTD3Q96H12 275 aa19.55■□□□□ 0.72
GTF3A-204ENST00000438571 GCNAQ96QF7 691 aa19.55■□□□□ 0.72
GTF3A-204ENST00000438571 PKMYT1Q99640 499 aa19.55■□□□□ 0.72
GTF3A-204ENST00000438571 MTMR12Q9C0I1 747 aa19.55■□□□□ 0.72
GTF3A-204ENST00000438571 HPS4Q9NQG7 708 aa19.55■□□□□ 0.72
GTF3A-204ENST00000438571 PANK4Q9NVE7 773 aa19.55■□□□□ 0.72
GTF3A-204ENST00000438571 DDX43Q9NXZ2 648 aaKnown RBP19.55■□□□□ 0.72
GTF3A-204ENST00000438571 MAGED2Q9UNF1 606 aaPredicted RBP19.55■□□□□ 0.72
GTF3A-204ENST00000438571 EXOC7Q9UPT5 735 aa19.55■□□□□ 0.72
GTF3A-204ENST00000438571 HRO43593 1189 aa19.54■□□□□ 0.72
GTF3A-204ENST00000438571 PRPF40AO75400 957 aaKnown RBP19.54■□□□□ 0.72
GTF3A-204ENST00000438571 GARTP22102 1010 aa19.54■□□□□ 0.72
GTF3A-204ENST00000438571 CYP2F1P24903 491 aa19.54■□□□□ 0.72
GTF3A-204ENST00000438571 WEE1P30291 646 aa19.54■□□□□ 0.72
GTF3A-204ENST00000438571 CCINQ13939 588 aa19.54■□□□□ 0.72
GTF3A-204ENST00000438571 LRRC32Q14392 662 aa19.54■□□□□ 0.72
GTF3A-204ENST00000438571 TAF12Q16514 161 aa19.54■□□□□ 0.72
GTF3A-204ENST00000438571 DDR2Q16832 855 aa19.54■□□□□ 0.72
GTF3A-204ENST00000438571 INTS6LQ5JSJ4 861 aaKnown RBP19.54■□□□□ 0.72
GTF3A-204ENST00000438571 CCDC73Q6ZRK6 1079 aa19.54■□□□□ 0.72
GTF3A-204ENST00000438571 DCP1BQ8IZD4 617 aaKnown RBP19.54■□□□□ 0.72
GTF3A-204ENST00000438571 SYCP3Q8IZU3 236 aa19.54■□□□□ 0.72
GTF3A-204ENST00000438571 CMTM8Q8IZV2 173 aa19.54■□□□□ 0.72
GTF3A-204ENST00000438571 USP13Q92995 863 aaPredicted RBP19.54■□□□□ 0.72
GTF3A-204ENST00000438571 USP18Q9UMW8 372 aa19.54■□□□□ 0.72
GTF3A-204ENST00000438571 NCOR2Q9Y618 2525 aa19.53■□□□□ 0.72
GTF3A-204ENST00000438571 KRT19P08727 400 aa19.53■□□□□ 0.72
GTF3A-204ENST00000438571 PNPLA4P41247 253 aa19.53■□□□□ 0.72
GTF3A-204ENST00000438571 TSPY1Q01534 308 aa19.53■□□□□ 0.72
GTF3A-204ENST00000438571 SPEM2Q0P670 501 aa19.53■□□□□ 0.72
GTF3A-204ENST00000438571 SLC39A14Q15043 492 aa19.53■□□□□ 0.72
GTF3A-204ENST00000438571 NAIF1Q69YI7 327 aaPredicted RBP19.53■□□□□ 0.72
GTF3A-204ENST00000438571 CELF5Q8N6W0 485 aaKnown RBP19.53■□□□□ 0.72
GTF3A-204ENST00000438571 OR5B17Q8NGF7 314 aa19.53■□□□□ 0.72
GTF3A-204ENST00000438571 GKN1Q9NS71 199 aa19.53■□□□□ 0.72
GTF3A-204ENST00000438571 GMEB2Q9UKD1 530 aa19.53■□□□□ 0.72
GTF3A-204ENST00000438571 GTF3C4Q9UKN8 822 aa19.53■□□□□ 0.72
GTF3A-204ENST00000438571 SNX9Q9Y5X1 595 aa19.53■□□□□ 0.72
GTF3A-204ENST00000438571 NUP205Q92621 2012 aa19.52■□□□□ 0.72
GTF3A-204ENST00000438571 EXTL3O43909 919 aa19.52■□□□□ 0.72
GTF3A-204ENST00000438571 ARSAP15289 507 aa19.52■□□□□ 0.72
GTF3A-204ENST00000438571 ATXN1P54253 815 aaKnown RBP19.52■□□□□ 0.72
GTF3A-204ENST00000438571 NRLP54845 237 aa19.52■□□□□ 0.72
GTF3A-204ENST00000438571 SMARCB1Q12824 385 aa19.52■□□□□ 0.72
GTF3A-204ENST00000438571 PPP2R5DQ14738 602 aa19.52■□□□□ 0.72
GTF3A-204ENST00000438571 ITPRIPL2Q3MIP1 535 aa19.52■□□□□ 0.72
GTF3A-204ENST00000438571 CSGALNACT2Q8N6G5 542 aa19.52■□□□□ 0.72
GTF3A-204ENST00000438571 LEO1Q8WVC0 666 aaPredicted RBP19.52■□□□□ 0.72
GTF3A-204ENST00000438571 SLC22A12Q96S37 553 aa19.52■□□□□ 0.72
GTF3A-204ENST00000438571 FAM83CQ9BQN1 747 aa19.52■□□□□ 0.72
GTF3A-204ENST00000438571 EBF3Q9H4W6 596 aa19.52■□□□□ 0.72
GTF3A-204ENST00000438571 POLR3BQ9NW08 1133 aaPredicted RBP19.52■□□□□ 0.72
GTF3A-204ENST00000438571 PCDHB13Q9Y5F0 798 aa19.52■□□□□ 0.72
GTF3A-204ENST00000438571 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.52■□□□□ 0.72
GTF3A-204ENST00000438571 HUS1O60921 280 aa19.51■□□□□ 0.71
GTF3A-204ENST00000438571 ATP2C2O75185 946 aa19.51■□□□□ 0.71
GTF3A-204ENST00000438571 PAPSS2O95340 614 aaPredicted RBP19.51■□□□□ 0.71
GTF3A-204ENST00000438571 LDHAP00338 332 aaKnown RBP19.51■□□□□ 0.71
GTF3A-204ENST00000438571 HOXD13P35453 343 aa19.51■□□□□ 0.71
GTF3A-204ENST00000438571 PLCB2Q00722 1185 aa19.51■□□□□ 0.71
GTF3A-204ENST00000438571 E2F4Q16254 413 aa19.51■□□□□ 0.71
GTF3A-204ENST00000438571 DGKKQ5KSL6 1271 aa19.51■□□□□ 0.71
GTF3A-204ENST00000438571 FSTL4Q6MZW2 842 aa19.51■□□□□ 0.71
GTF3A-204ENST00000438571 C1orf228Q6PIY5 440 aa19.51■□□□□ 0.71
GTF3A-204ENST00000438571 CBWD2Q8IUF1 395 aa19.51■□□□□ 0.71
GTF3A-204ENST00000438571 ADGRF2Q8IZF7 708 aa19.51■□□□□ 0.71
GTF3A-204ENST00000438571 GPD1LQ8N335 351 aa19.51■□□□□ 0.71
GTF3A-204ENST00000438571 LRRC52Q8N7C0 313 aa19.51■□□□□ 0.71
GTF3A-204ENST00000438571 SECISBP2LQ93073 1101 aaKnown RBP19.51■□□□□ 0.71
GTF3A-204ENST00000438571 ACBD6Q9BR61 282 aa19.51■□□□□ 0.71
GTF3A-204ENST00000438571 ITGA11Q9UKX5 1188 aa19.51■□□□□ 0.71
GTF3A-204ENST00000438571 MORC2Q9Y6X9 1032 aaPredicted RBP19.51■□□□□ 0.71
GTF3A-204ENST00000438571 NOL4O94818 638 aa19.5■□□□□ 0.71
GTF3A-204ENST00000438571 TMEM191BP0C7N4 346 aa19.5■□□□□ 0.71
GTF3A-204ENST00000438571 CSH1P0DML2 217 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms