RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 LILRA4P59901 499 aa22.35■■□□□ 1.17
PTPRF-207ENST00000436724 LLGL1Q15334 1064 aa22.35■■□□□ 1.17
PTPRF-207ENST00000436724 PPP1R26Q5T8A7 1209 aaPredicted RBP22.35■■□□□ 1.17
PTPRF-207ENST00000436724 SMYD5Q6GMV2 418 aa22.35■■□□□ 1.17
PTPRF-207ENST00000436724 DNAJC24Q6P3W2 148 aa22.35■■□□□ 1.17
PTPRF-207ENST00000436724 KBTBD7Q8WVZ9 684 aa22.35■■□□□ 1.17
PTPRF-207ENST00000436724 ARL5CA6NH57 179 aa22.35■■□□□ 1.17
PTPRF-207ENST00000436724 GOLGA8SH3BPF8 625 aa22.35■■□□□ 1.17
PTPRF-207ENST00000436724 PROSCO94903 275 aa22.35■■□□□ 1.17
PTPRF-207ENST00000436724 PDGFRBP09619 1106 aa22.35■■□□□ 1.17
PTPRF-207ENST00000436724 CKBP12277 381 aa22.35■■□□□ 1.17
PTPRF-207ENST00000436724 LMO2P25791 158 aa22.35■■□□□ 1.17
PTPRF-207ENST00000436724 ZNF560Q96MR9 790 aa22.35■■□□□ 1.17
PTPRF-207ENST00000436724 ADAM2Q99965 735 aa22.35■■□□□ 1.17
PTPRF-207ENST00000436724 TSEN34Q9BSV6 310 aaKnown RBP22.35■■□□□ 1.17
PTPRF-207ENST00000436724 DDX47Q9H0S4 455 aaKnown RBP22.35■■□□□ 1.17
PTPRF-207ENST00000436724 TTC7AQ9ULT0 858 aaPredicted RBP22.35■■□□□ 1.17
PTPRF-207ENST00000436724 USTQ9Y2C2 406 aa22.35■■□□□ 1.17
PTPRF-207ENST00000436724 TMEM191CA6NGB0 347 aa22.34■■□□□ 1.17
PTPRF-207ENST00000436724 ERBB2P04626 1255 aa22.34■■□□□ 1.17
PTPRF-207ENST00000436724 MYBL2P10244 700 aa22.34■■□□□ 1.17
PTPRF-207ENST00000436724 CTNNA2P26232 953 aa22.34■■□□□ 1.17
PTPRF-207ENST00000436724 SCNN1GP51170 649 aa22.34■■□□□ 1.17
PTPRF-207ENST00000436724 ARHGEF6Q15052 776 aa22.34■■□□□ 1.17
PTPRF-207ENST00000436724 CCDC70Q6NSX1 233 aa22.34■■□□□ 1.17
PTPRF-207ENST00000436724 GSPT2Q8IYD1 628 aaKnown RBP22.34■■□□□ 1.17
PTPRF-207ENST00000436724 TTC39CQ8N584 583 aa22.34■■□□□ 1.17
PTPRF-207ENST00000436724 TSPAN18Q96SJ8 248 aa22.34■■□□□ 1.17
PTPRF-207ENST00000436724 ZSCAN5CA6NGD5 496 aaPredicted RBP22.33■■□□□ 1.17
PTPRF-207ENST00000436724 A8MXQ7 604 aa22.33■■□□□ 1.17
PTPRF-207ENST00000436724 PIK3R2O00459 728 aa22.33■■□□□ 1.17
PTPRF-207ENST00000436724 OGDHQ02218 1023 aa22.33■■□□□ 1.17
PTPRF-207ENST00000436724 ZNF252P-AS1Q0IIN9 211 aa22.33■■□□□ 1.17
PTPRF-207ENST00000436724 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.33■■□□□ 1.176e-6■■■□□ 16.8
PTPRF-207ENST00000436724 FAM124BQ9H5Z6 455 aaPredicted RBP22.33■■□□□ 1.17
PTPRF-207ENST00000436724 GDAP2Q9NXN4 497 aa22.33■■□□□ 1.17
PTPRF-207ENST00000436724 SAGE1Q9NXZ1 904 aa22.33■■□□□ 1.17
PTPRF-207ENST00000436724 ERICH4A6NGS2 130 aa22.33■■□□□ 1.16
PTPRF-207ENST00000436724 PNPLA4P41247 253 aa22.33■■□□□ 1.16
PTPRF-207ENST00000436724 PDCLQ13371 301 aa22.33■■□□□ 1.16
PTPRF-207ENST00000436724 DSC3Q14574 896 aa22.33■■□□□ 1.16
PTPRF-207ENST00000436724 MBTPS1Q14703 1052 aa22.33■■□□□ 1.16
PTPRF-207ENST00000436724 CASP8Q14790 479 aa22.33■■□□□ 1.16
PTPRF-207ENST00000436724 GOLGA7BQ2TAP0 167 aa22.33■■□□□ 1.16
PTPRF-207ENST00000436724 FAM26DQ5JW98 314 aa22.33■■□□□ 1.16
PTPRF-207ENST00000436724 PPP1R15BQ5SWA1 713 aa22.33■■□□□ 1.16
PTPRF-207ENST00000436724 DCUN1D2Q6PH85 259 aa22.33■■□□□ 1.16
PTPRF-207ENST00000436724 LCLAT1Q6UWP7 414 aa22.33■■□□□ 1.16
PTPRF-207ENST00000436724 C3orf20Q8ND61 904 aa22.33■■□□□ 1.16
PTPRF-207ENST00000436724 C18orf8Q96DM3 657 aa22.33■■□□□ 1.16
PTPRF-207ENST00000436724 UNC93B1Q9H1C4 597 aa22.33■■□□□ 1.16
PTPRF-207ENST00000436724 TSPYL2Q9H2G4 693 aaPredicted RBP22.33■■□□□ 1.16
PTPRF-207ENST00000436724 SYNCQ9H7C4 482 aa22.33■■□□□ 1.16
PTPRF-207ENST00000436724 MKI67P46013 3256 aaKnown RBP22.33■■□□□ 1.16
PTPRF-207ENST00000436724 TULP2O00295 520 aa22.32■■□□□ 1.16
PTPRF-207ENST00000436724 RAD51CO43502 376 aa22.32■■□□□ 1.16
PTPRF-207ENST00000436724 THP07101 528 aa22.32■■□□□ 1.16
PTPRF-207ENST00000436724 GLI1P08151 1106 aa22.32■■□□□ 1.16
PTPRF-207ENST00000436724 PFKMP08237 780 aa22.32■■□□□ 1.16
PTPRF-207ENST00000436724 LRPAP1P30533 357 aa22.32■■□□□ 1.16
PTPRF-207ENST00000436724 GYS2P54840 703 aa22.32■■□□□ 1.16
PTPRF-207ENST00000436724 RWDD2BP57060 319 aa22.32■■□□□ 1.16
PTPRF-207ENST00000436724 TAS2R40P59535 323 aa22.32■■□□□ 1.16
PTPRF-207ENST00000436724 PSMC1P62191 440 aaKnown RBP22.32■■□□□ 1.16
PTPRF-207ENST00000436724 SV2CQ496J9 727 aa22.32■■□□□ 1.16
PTPRF-207ENST00000436724 TRAF7Q6Q0C0 670 aa22.32■■□□□ 1.16
PTPRF-207ENST00000436724 HACE1Q8IYU2 909 aa22.32■■□□□ 1.16
PTPRF-207ENST00000436724 STIM2Q9P246 746 aa22.32■■□□□ 1.16
PTPRF-207ENST00000436724 TCF4P15884 667 aa22.32■■□□□ 1.16
PTPRF-207ENST00000436724 SLC1A1P43005 524 aa22.32■■□□□ 1.16
PTPRF-207ENST00000436724 CLCNKBP51801 687 aa22.32■■□□□ 1.16
PTPRF-207ENST00000436724 CDR1P51861 262 aa22.32■■□□□ 1.16
PTPRF-207ENST00000436724 PRMT2P55345 433 aa22.32■■□□□ 1.16
PTPRF-207ENST00000436724 MRPL10Q7Z7H8 261 aaKnown RBP22.32■■□□□ 1.16
PTPRF-207ENST00000436724 XYLT1Q86Y38 959 aa22.32■■□□□ 1.16
PTPRF-207ENST00000436724 SLC43A3Q8NBI5 491 aa22.32■■□□□ 1.16
PTPRF-207ENST00000436724 APPL2Q8NEU8 664 aa22.32■■□□□ 1.16
PTPRF-207ENST00000436724 PAAF1Q9BRP4 392 aa22.32■■□□□ 1.16
PTPRF-207ENST00000436724 KIAA1257Q9ULG3 409 aa22.32■■□□□ 1.16
PTPRF-207ENST00000436724 A0A0U1RQF3 1178 aa22.31■■□□□ 1.16
PTPRF-207ENST00000436724 TCRBV7S2A1N4TA0A589 114 aa22.31■■□□□ 1.16
PTPRF-207ENST00000436724 F8VP50 259 aa22.31■■□□□ 1.16
PTPRF-207ENST00000436724 SART1O43290 800 aaKnown RBP22.31■■□□□ 1.16
PTPRF-207ENST00000436724 RFC1P35251 1148 aaPredicted RBP22.31■■□□□ 1.16
PTPRF-207ENST00000436724 GNL1P36915 607 aaPredicted RBP22.31■■□□□ 1.16
PTPRF-207ENST00000436724 TTC30AQ86WT1 665 aa22.31■■□□□ 1.16
PTPRF-207ENST00000436724 ZDHHC14Q8IZN3 488 aa22.31■■□□□ 1.16
PTPRF-207ENST00000436724 JOSD2Q8TAC2 188 aa22.31■■□□□ 1.16
PTPRF-207ENST00000436724 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.31■■□□□ 1.16
PTPRF-207ENST00000436724 STRIP2Q9ULQ0 834 aa22.31■■□□□ 1.16
PTPRF-207ENST00000436724 GIT1Q9Y2X7 761 aa22.31■■□□□ 1.16
PTPRF-207ENST00000436724 A0A0U1RQG5 324 aaPredicted RBP22.31■■□□□ 1.16
PTPRF-207ENST00000436724 ESYT3A0FGR9 886 aa22.31■■□□□ 1.16
PTPRF-207ENST00000436724 GJC1P36383 396 aa22.31■■□□□ 1.16
PTPRF-207ENST00000436724 SSR1P43307 286 aaKnown RBP22.31■■□□□ 1.16
PTPRF-207ENST00000436724 SEL1L2Q5TEA6 688 aa22.31■■□□□ 1.16
PTPRF-207ENST00000436724 UNC93AQ86WB7 457 aa22.31■■□□□ 1.16
PTPRF-207ENST00000436724 IP6K2Q9UHH9 426 aa22.31■■□□□ 1.16
PTPRF-207ENST00000436724 CASTOR2A6NHX0 329 aa22.3■■□□□ 1.16
PTPRF-207ENST00000436724 HUS1O60921 280 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms