RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 STAT1P42224 750 aa7.53□□□□□ -1.2
LSM3P3-201ENST00000436601 ASPAP45381 313 aa7.53□□□□□ -1.2
LSM3P3-201ENST00000436601 GATMP50440 423 aa7.53□□□□□ -1.2
LSM3P3-201ENST00000436601 RNF144AP50876 292 aaPredicted RBP7.53□□□□□ -1.2
LSM3P3-201ENST00000436601 GRIK3Q13003 919 aa7.53□□□□□ -1.2
LSM3P3-201ENST00000436601 CUL2Q13617 745 aa7.53□□□□□ -1.2
LSM3P3-201ENST00000436601 ARHGAP44Q17R89 818 aa7.53□□□□□ -1.2
LSM3P3-201ENST00000436601 ZNF699Q32M78 642 aa7.53□□□□□ -1.2
LSM3P3-201ENST00000436601 WDR72Q3MJ13 1102 aa7.53□□□□□ -1.2
LSM3P3-201ENST00000436601 HS1BP3Q53T59 392 aa7.53□□□□□ -1.2
LSM3P3-201ENST00000436601 NOMO2Q5JPE7 1267 aa7.53□□□□□ -1.2
LSM3P3-201ENST00000436601 SFMBT2Q5VUG0 894 aa7.53□□□□□ -1.2
LSM3P3-201ENST00000436601 HGSNATQ68CP4 663 aa7.53□□□□□ -1.2
LSM3P3-201ENST00000436601 GLB1LQ6UWU2 654 aa7.53□□□□□ -1.2
LSM3P3-201ENST00000436601 CD300LGQ6UXG3 332 aa7.53□□□□□ -1.2
LSM3P3-201ENST00000436601 ENOSF1Q7L5Y1 443 aa7.53□□□□□ -1.2
LSM3P3-201ENST00000436601 ZNF280BQ86YH2 543 aa7.53□□□□□ -1.2
LSM3P3-201ENST00000436601 FAM71AQ8IYT1 594 aa7.53□□□□□ -1.2
LSM3P3-201ENST00000436601 RPUSD2Q8IZ73 545 aaKnown RBP7.53□□□□□ -1.2
LSM3P3-201ENST00000436601 MEIOBQ8N635 442 aa7.53□□□□□ -1.2
LSM3P3-201ENST00000436601 LRRC52Q8N7C0 313 aa7.53□□□□□ -1.2
LSM3P3-201ENST00000436601 UBR7Q8N806 425 aa7.53□□□□□ -1.2
LSM3P3-201ENST00000436601 RABGGTAQ92696 567 aa7.53□□□□□ -1.2
LSM3P3-201ENST00000436601 FAM161BQ96MY7 647 aa7.53□□□□□ -1.2
LSM3P3-201ENST00000436601 CASD1Q96PB1 797 aa7.53□□□□□ -1.2
LSM3P3-201ENST00000436601 SPAG5Q96R06 1193 aa7.53□□□□□ -1.2
LSM3P3-201ENST00000436601 RPS6KC1Q96S38 1066 aa7.53□□□□□ -1.2
LSM3P3-201ENST00000436601 CHP1Q99653 195 aa7.53□□□□□ -1.2
LSM3P3-201ENST00000436601 BAG1Q99933 345 aaPredicted RBP7.53□□□□□ -1.2
LSM3P3-201ENST00000436601 PAAF1Q9BRP4 392 aa7.53□□□□□ -1.2
LSM3P3-201ENST00000436601 BCO2Q9BYV7 579 aa7.53□□□□□ -1.2
LSM3P3-201ENST00000436601 IMPG2Q9BZV3 1241 aa7.53□□□□□ -1.2
LSM3P3-201ENST00000436601 SDCBP2Q9H190 292 aa7.53□□□□□ -1.2
LSM3P3-201ENST00000436601 NUCKS1Q9H1E3 243 aaKnown RBP7.53□□□□□ -1.2
LSM3P3-201ENST00000436601 ZNF395Q9H8N7 513 aaPredicted RBP7.53□□□□□ -1.2
LSM3P3-201ENST00000436601 IL23AQ9NPF7 189 aa7.53□□□□□ -1.2
LSM3P3-201ENST00000436601 SLC38A7Q9NVC3 462 aa7.53□□□□□ -1.2
LSM3P3-201ENST00000436601 NXF1Q9UBU9 619 aaKnown RBP7.53□□□□□ -1.2
LSM3P3-201ENST00000436601 CNTN6Q9UQ52 1028 aa7.53□□□□□ -1.2
LSM3P3-201ENST00000436601 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.53□□□□□ -1.2
LSM3P3-201ENST00000436601 MYH11P35749 1972 aa7.53□□□□□ -1.2
LSM3P3-201ENST00000436601 EVPLQ92817 2033 aa7.52□□□□□ -1.2
LSM3P3-201ENST00000436601 TTC24A2A3L6 582 aaPredicted RBP7.52□□□□□ -1.21
LSM3P3-201ENST00000436601 CASTOR2A6NHX0 329 aa7.52□□□□□ -1.21
LSM3P3-201ENST00000436601 PODXLO00592 558 aa7.52□□□□□ -1.21
LSM3P3-201ENST00000436601 DGKIO75912 1065 aa7.52□□□□□ -1.21
LSM3P3-201ENST00000436601 GFPT2O94808 682 aa7.52□□□□□ -1.21
LSM3P3-201ENST00000436601 FGBP02675 491 aa7.52□□□□□ -1.21
LSM3P3-201ENST00000436601 PLEKP08567 350 aaPredicted RBP7.52□□□□□ -1.21
LSM3P3-201ENST00000436601 WEE2P0C1S8 567 aa7.52□□□□□ -1.21
LSM3P3-201ENST00000436601 TBXAS1P24557 533 aaPredicted RBP7.52□□□□□ -1.21
LSM3P3-201ENST00000436601 RPL9P32969 192 aaKnown RBP7.52□□□□□ -1.21
LSM3P3-201ENST00000436601 PRKCIP41743 596 aa7.52□□□□□ -1.21
LSM3P3-201ENST00000436601 CLCNKBP51801 687 aa7.52□□□□□ -1.21
LSM3P3-201ENST00000436601 CDH8P55286 799 aa7.52□□□□□ -1.21
LSM3P3-201ENST00000436601 LILRA4P59901 499 aa7.52□□□□□ -1.21
LSM3P3-201ENST00000436601 WDR5P61964 334 aaKnown RBP7.52□□□□□ -1.21
LSM3P3-201ENST00000436601 DEFB103AP81534 67 aa7.52□□□□□ -1.21
LSM3P3-201ENST00000436601 CDK17Q00537 523 aa7.52□□□□□ -1.21
LSM3P3-201ENST00000436601 ARID5AQ03989 594 aa7.52□□□□□ -1.21
LSM3P3-201ENST00000436601 FPGSQ05932 587 aa7.52□□□□□ -1.21
LSM3P3-201ENST00000436601 DSC1Q08554 894 aa7.52□□□□□ -1.21
LSM3P3-201ENST00000436601 FOXC1Q12948 553 aa7.52□□□□□ -1.21
LSM3P3-201ENST00000436601 MYO1EQ12965 1108 aa7.52□□□□□ -1.21
LSM3P3-201ENST00000436601 TUSC3Q13454 348 aa7.52□□□□□ -1.21
LSM3P3-201ENST00000436601 MTF1Q14872 753 aa7.52□□□□□ -1.21
LSM3P3-201ENST00000436601 ASIC2Q16515 512 aa7.52□□□□□ -1.21
LSM3P3-201ENST00000436601 UPP1Q16831 310 aa7.52□□□□□ -1.21
LSM3P3-201ENST00000436601 ZNF667Q5HYK9 610 aa7.52□□□□□ -1.21
LSM3P3-201ENST00000436601 RAD9BQ6WBX8 426 aa7.52□□□□□ -1.21
LSM3P3-201ENST00000436601 ZNF365Q70YC5 407 aa7.52□□□□□ -1.21
LSM3P3-201ENST00000436601 LIMS2Q7Z4I7 341 aa7.52□□□□□ -1.21
LSM3P3-201ENST00000436601 TMCO2Q7Z6W1 182 aaPredicted RBP7.52□□□□□ -1.21
LSM3P3-201ENST00000436601 SPNS2Q8IVW8 549 aa7.52□□□□□ -1.21
LSM3P3-201ENST00000436601 COLGALT2Q8IYK4 626 aa7.52□□□□□ -1.21
LSM3P3-201ENST00000436601 C3orf58Q8NDZ4 430 aa7.52□□□□□ -1.21
LSM3P3-201ENST00000436601 OLIG1Q8TAK6 271 aa7.52□□□□□ -1.21
LSM3P3-201ENST00000436601 GPR152Q8TDT2 470 aa7.52□□□□□ -1.21
LSM3P3-201ENST00000436601 PIK3R5Q8WYR1 880 aa7.52□□□□□ -1.21
LSM3P3-201ENST00000436601 RNF34Q969K3 372 aa7.52□□□□□ -1.21
LSM3P3-201ENST00000436601 TOP1MTQ969P6 601 aa7.52□□□□□ -1.21
LSM3P3-201ENST00000436601 JAKMIP2Q96AA8 810 aa7.52□□□□□ -1.21
LSM3P3-201ENST00000436601 FAXDC2Q96IV6 333 aa7.52□□□□□ -1.21
LSM3P3-201ENST00000436601 FAM81BQ96LP2 452 aa7.52□□□□□ -1.21
LSM3P3-201ENST00000436601 HTATIP2Q9BUP3 242 aa7.52□□□□□ -1.21
LSM3P3-201ENST00000436601 TBC1D13Q9NVG8 400 aa7.52□□□□□ -1.21
LSM3P3-201ENST00000436601 GDAP2Q9NXN4 497 aa7.52□□□□□ -1.21
LSM3P3-201ENST00000436601 ARHGAP20Q9P2F6 1191 aa7.52□□□□□ -1.21
LSM3P3-201ENST00000436601 KANSL3Q9P2N6 904 aa7.52□□□□□ -1.21
LSM3P3-201ENST00000436601 PRKAG2Q9UGJ0 569 aa7.52□□□□□ -1.21
LSM3P3-201ENST00000436601 PYCARDQ9ULZ3 195 aa7.52□□□□□ -1.21
LSM3P3-201ENST00000436601 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.52□□□□□ -1.21
LSM3P3-201ENST00000436601 TRIP12Q14669 1992 aaPredicted RBP7.51□□□□□ -1.21
LSM3P3-201ENST00000436601 KPNA7A9QM74 516 aa7.51□□□□□ -1.21
LSM3P3-201ENST00000436601 F8W810 466 aa7.51□□□□□ -1.21
LSM3P3-201ENST00000436601 CYP26A1O43174 497 aa7.51□□□□□ -1.21
LSM3P3-201ENST00000436601 EFCAB14O75071 495 aa7.51□□□□□ -1.21
LSM3P3-201ENST00000436601 BAIAP3O94812 1187 aa7.51□□□□□ -1.21
LSM3P3-201ENST00000436601 MICAL2O94851 1124 aa7.51□□□□□ -1.21
LSM3P3-201ENST00000436601 UPP2O95045 317 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms