RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 FAM13AO94988 1023 aa7.82□□□□□ -1.16
CPSF6-202ENST00000435070 MT-ND3P03897 115 aa7.82□□□□□ -1.16
CPSF6-202ENST00000435070 RAP1GDS1P52306 607 aa7.82□□□□□ -1.16
CPSF6-202ENST00000435070 NCKAP1LP55160 1127 aa7.82□□□□□ -1.16
CPSF6-202ENST00000435070 TMPRSS15P98073 1019 aa7.82□□□□□ -1.16
CPSF6-202ENST00000435070 PDK1Q15118 436 aa7.82□□□□□ -1.16
CPSF6-202ENST00000435070 HSP90AA5PQ58FG0 334 aa7.82□□□□□ -1.16
CPSF6-202ENST00000435070 TBC1D9BQ66K14 1250 aa7.82□□□□□ -1.16
CPSF6-202ENST00000435070 SYT11Q9BT88 431 aa7.82□□□□□ -1.16
CPSF6-202ENST00000435070 GINM1Q9NU53 330 aa7.82□□□□□ -1.16
CPSF6-202ENST00000435070 UBAP1Q9NZ09 502 aa7.82□□□□□ -1.16
CPSF6-202ENST00000435070 DTNAQ9Y4J8 743 aa7.82□□□□□ -1.16
CPSF6-202ENST00000435070 F8W8V4 182 aa7.82□□□□□ -1.16
CPSF6-202ENST00000435070 SMIM18P0DKX4 95 aa7.82□□□□□ -1.16
CPSF6-202ENST00000435070 STMN1P16949 149 aa7.82□□□□□ -1.16
CPSF6-202ENST00000435070 AQP5P55064 265 aa7.82□□□□□ -1.16
CPSF6-202ENST00000435070 PRKG1Q13976 671 aa7.82□□□□□ -1.16
CPSF6-202ENST00000435070 RASA3Q14644 834 aa7.82□□□□□ -1.16
CPSF6-202ENST00000435070 TAF12Q16514 161 aa7.82□□□□□ -1.16
CPSF6-202ENST00000435070 EFHC1Q5JVL4 640 aa7.82□□□□□ -1.16
CPSF6-202ENST00000435070 C12orf60Q5U649 245 aa7.82□□□□□ -1.16
CPSF6-202ENST00000435070 DENND5BQ6ZUT9 1274 aa7.82□□□□□ -1.16
CPSF6-202ENST00000435070 AMIGO2Q86SJ2 522 aa7.82□□□□□ -1.16
CPSF6-202ENST00000435070 PATL1Q86TB9 770 aaKnown RBP7.82□□□□□ -1.16
CPSF6-202ENST00000435070 SLC15A3Q8IY34 581 aa7.82□□□□□ -1.16
CPSF6-202ENST00000435070 SMYD1Q8NB12 490 aa7.82□□□□□ -1.16
CPSF6-202ENST00000435070 CD101Q93033 1021 aa7.82□□□□□ -1.16
CPSF6-202ENST00000435070 FAM84BQ96KN1 310 aaPredicted RBP7.82□□□□□ -1.16
CPSF6-202ENST00000435070 SLX1AQ9BQ83 275 aa7.82□□□□□ -1.16
CPSF6-202ENST00000435070 CCDC28BQ9BUN5 200 aa7.82□□□□□ -1.16
CPSF6-202ENST00000435070 TMEM117Q9H0C3 514 aa7.82□□□□□ -1.16
CPSF6-202ENST00000435070 TSC22D4Q9Y3Q8 395 aa7.82□□□□□ -1.16
CPSF6-202ENST00000435070 TISP43B9A030 160 aa7.81□□□□□ -1.16
CPSF6-202ENST00000435070 SPTLC1O15269 473 aa7.81□□□□□ -1.16
CPSF6-202ENST00000435070 CIITAP33076 1130 aa7.81□□□□□ -1.16
CPSF6-202ENST00000435070 HALP42357 657 aa7.81□□□□□ -1.16
CPSF6-202ENST00000435070 CD151P48509 253 aa7.81□□□□□ -1.16
CPSF6-202ENST00000435070 CAV1Q03135 178 aa7.81□□□□□ -1.16
CPSF6-202ENST00000435070 SULT2A1Q06520 285 aa7.81□□□□□ -1.16
CPSF6-202ENST00000435070 BBS9Q3SYG4 887 aa7.81□□□□□ -1.16
CPSF6-202ENST00000435070 ACSF2Q96CM8 615 aaPredicted RBP7.81□□□□□ -1.16
CPSF6-202ENST00000435070 NDUFA13Q9P0J0 144 aa7.81□□□□□ -1.16
CPSF6-202ENST00000435070 EMSYQ7Z589 1322 aa7.81□□□□□ -1.16
CPSF6-202ENST00000435070 KDM3AQ9Y4C1 1321 aa7.81□□□□□ -1.16
CPSF6-202ENST00000435070 TJP1Q07157 1748 aa7.81□□□□□ -1.16
CPSF6-202ENST00000435070 TMEM247A6NEH6 219 aa7.81□□□□□ -1.16
CPSF6-202ENST00000435070 NDC80O14777 642 aa7.81□□□□□ -1.16
CPSF6-202ENST00000435070 MAGEC1O60732 1142 aa7.81□□□□□ -1.16
CPSF6-202ENST00000435070 GMNNO75496 209 aa7.81□□□□□ -1.16
CPSF6-202ENST00000435070 SLC12A3P55017 1021 aa7.81□□□□□ -1.16
CPSF6-202ENST00000435070 ITGA9Q13797 1035 aa7.81□□□□□ -1.16
CPSF6-202ENST00000435070 CNGA3Q16281 694 aa7.81□□□□□ -1.16
CPSF6-202ENST00000435070 ATP13A4Q4VNC1 1196 aa7.81□□□□□ -1.16
CPSF6-202ENST00000435070 PPP6R3Q5H9R7 873 aaPredicted RBP7.81□□□□□ -1.16
CPSF6-202ENST00000435070 C6orf183Q5T699 404 aa7.81□□□□□ -1.16
CPSF6-202ENST00000435070 ITPRIPL1Q6GPH6 555 aa7.81□□□□□ -1.16
CPSF6-202ENST00000435070 UGT2A3Q6UWM9 527 aa7.81□□□□□ -1.16
CPSF6-202ENST00000435070 C3orf62Q6ZUJ4 267 aa7.81□□□□□ -1.16
CPSF6-202ENST00000435070 CCDC24Q8N4L8 307 aa7.81□□□□□ -1.16
CPSF6-202ENST00000435070 PSPC1Q8WXF1 523 aaKnown RBP7.81□□□□□ -1.16
CPSF6-202ENST00000435070 CEP95Q96GE4 821 aa7.81□□□□□ -1.16
CPSF6-202ENST00000435070 SLC13A1Q9BZW2 595 aa7.81□□□□□ -1.16
CPSF6-202ENST00000435070 TIAM2Q8IVF5 1701 aa7.81□□□□□ -1.16
CPSF6-202ENST00000435070 GPSM2P81274 684 aa7.81□□□□□ -1.16
CPSF6-202ENST00000435070 KRT81Q14533 505 aa7.81□□□□□ -1.16
CPSF6-202ENST00000435070 TTBK2Q6IQ55 1244 aa7.81□□□□□ -1.16
CPSF6-202ENST00000435070 TMC7Q7Z402 723 aa7.81□□□□□ -1.16
CPSF6-202ENST00000435070 FNDC8Q8TC99 324 aa7.81□□□□□ -1.16
CPSF6-202ENST00000435070 PPP4R1Q8TF05 950 aa7.81□□□□□ -1.16
CPSF6-202ENST00000435070 TMIGD2Q96BF3 282 aa7.81□□□□□ -1.16
CPSF6-202ENST00000435070 UNC45AQ9H3U1 944 aa7.81□□□□□ -1.16
CPSF6-202ENST00000435070 PIK3CDO00329 1044 aa7.81□□□□□ -1.16
CPSF6-202ENST00000435070 ADCY6O43306 1168 aa7.81□□□□□ -1.16
CPSF6-202ENST00000435070 TBC1D12O60347 775 aa7.81□□□□□ -1.16
CPSF6-202ENST00000435070 PROCP04070 461 aa7.81□□□□□ -1.16
CPSF6-202ENST00000435070 CETN1Q12798 172 aa7.81□□□□□ -1.16
CPSF6-202ENST00000435070 ZCCHC23Q6ZST2 131 aa7.81□□□□□ -1.16
CPSF6-202ENST00000435070 ZNF398Q8TD17 642 aa7.81□□□□□ -1.16
CPSF6-202ENST00000435070 PYROXD1Q8WU10 500 aa7.81□□□□□ -1.16
CPSF6-202ENST00000435070 FAM84AQ96KN4 292 aa7.81□□□□□ -1.16
CPSF6-202ENST00000435070 PAFAH2Q99487 392 aa7.81□□□□□ -1.16
CPSF6-202ENST00000435070 POLR3CQ9BUI4 534 aaPredicted RBP7.81□□□□□ -1.16
CPSF6-202ENST00000435070 SENP1Q9P0U3 644 aa7.81□□□□□ -1.16
CPSF6-202ENST00000435070 TBC1D30Q9Y2I9 924 aa7.81□□□□□ -1.16
CPSF6-202ENST00000435070 TBL3Q12788 808 aaKnown RBP7.81□□□□□ -1.16
CPSF6-202ENST00000435070 EBF4Q9BQW3 602 aa7.81□□□□□ -1.16
CPSF6-202ENST00000435070 MYH11P35749 1972 aa7.8□□□□□ -1.16
CPSF6-202ENST00000435070 CYB561D2O14569 222 aa7.8□□□□□ -1.16
CPSF6-202ENST00000435070 NDUFB5O43674 189 aa7.8□□□□□ -1.16
CPSF6-202ENST00000435070 FKBP6O75344 327 aa7.8□□□□□ -1.16
CPSF6-202ENST00000435070 SRGAP2CP0DJJ0 459 aa7.8□□□□□ -1.16
CPSF6-202ENST00000435070 SRGAP2BP0DMP2 458 aa7.8□□□□□ -1.16
CPSF6-202ENST00000435070 CD97P48960 835 aa7.8□□□□□ -1.16
CPSF6-202ENST00000435070 VCPP55072 806 aaKnown RBP7.8□□□□□ -1.16
CPSF6-202ENST00000435070 LMBRD2Q68DH5 695 aaPredicted RBP7.8□□□□□ -1.16
CPSF6-202ENST00000435070 FOXR2Q6PJQ5 311 aa7.8□□□□□ -1.16
CPSF6-202ENST00000435070 HPS6Q86YV9 775 aa7.8□□□□□ -1.16
CPSF6-202ENST00000435070 ZFPM1Q8IX07 1006 aa7.8□□□□□ -1.16
CPSF6-202ENST00000435070 TRIML2Q8N7C3 387 aa7.8□□□□□ -1.16
CPSF6-202ENST00000435070 C12orf50Q8NA57 414 aaPredicted RBP7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms