RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 BRSK2Q8IWQ3 736 aa16.41■□□□□ 0.22
SCARF1-203ENST00000434376 LRRC34Q8IZ02 419 aa16.41■□□□□ 0.22
SCARF1-203ENST00000434376 CD101Q93033 1021 aa16.41■□□□□ 0.22
SCARF1-203ENST00000434376 C12orf42Q96LP6 360 aa16.41■□□□□ 0.22
SCARF1-203ENST00000434376 RBM15Q96T37 977 aaKnown RBP eCLIP16.41■□□□□ 0.22
SCARF1-203ENST00000434376 SENP7Q9BQF6 1050 aa16.41■□□□□ 0.22
SCARF1-203ENST00000434376 KIAA1586Q9HCI6 787 aa16.41■□□□□ 0.22
SCARF1-203ENST00000434376 ADAMTS5Q9UNA0 930 aa16.41■□□□□ 0.22
SCARF1-203ENST00000434376 FAM187AA6NFU0 413 aa16.41■□□□□ 0.22
SCARF1-203ENST00000434376 NEFHP12036 1026 aa16.41■□□□□ 0.22
SCARF1-203ENST00000434376 ZNF200P98182 395 aaPredicted RBP16.41■□□□□ 0.22
SCARF1-203ENST00000434376 C6orf89Q6UWU4 347 aa16.41■□□□□ 0.22
SCARF1-203ENST00000434376 CYP4X1Q8N118 509 aa16.41■□□□□ 0.22
SCARF1-203ENST00000434376 KCTD6Q8NC69 237 aa16.41■□□□□ 0.22
SCARF1-203ENST00000434376 PRCCQ92733 491 aaPredicted RBP16.41■□□□□ 0.22
SCARF1-203ENST00000434376 PARVAQ9NVD7 372 aa16.41■□□□□ 0.22
SCARF1-203ENST00000434376 CYTH4Q9UIA0 394 aa16.41■□□□□ 0.22
SCARF1-203ENST00000434376 HTTP42858 3142 aa16.41■□□□□ 0.22
SCARF1-203ENST00000434376 NFASCO94856 1347 aa16.41■□□□□ 0.22
SCARF1-203ENST00000434376 CCL15-CCL14A0A0B4J2E2 113 aa16.4■□□□□ 0.22
SCARF1-203ENST00000434376 PODXLO00592 558 aa16.4■□□□□ 0.22
SCARF1-203ENST00000434376 GJA5P36382 358 aa16.4■□□□□ 0.22
SCARF1-203ENST00000434376 CCL15Q16663 113 aa16.4■□□□□ 0.22
SCARF1-203ENST00000434376 IER5Q5VY09 327 aa16.4■□□□□ 0.22
SCARF1-203ENST00000434376 CD302Q8IX05 232 aa16.4■□□□□ 0.22
SCARF1-203ENST00000434376 MREGQ8N565 214 aa16.4■□□□□ 0.22
SCARF1-203ENST00000434376 ASS1P00966 412 aaKnown RBP16.4■□□□□ 0.22
SCARF1-203ENST00000434376 IFRD2Q12894 506 aaPredicted RBP16.4■□□□□ 0.22
SCARF1-203ENST00000434376 SIX1Q15475 284 aaPredicted RBP16.4■□□□□ 0.22
SCARF1-203ENST00000434376 NUGGCQ68CJ6 796 aa16.4■□□□□ 0.22
SCARF1-203ENST00000434376 SCUBE3Q8IX30 993 aa16.4■□□□□ 0.22
SCARF1-203ENST00000434376 C1orf127Q8N9H9 656 aa16.4■□□□□ 0.22
SCARF1-203ENST00000434376 OR6B3Q8NGW1 331 aa16.4■□□□□ 0.22
SCARF1-203ENST00000434376 SDCBP2Q9H190 292 aa16.4■□□□□ 0.22
SCARF1-203ENST00000434376 EPB41L4BQ9H329 900 aa16.4■□□□□ 0.22
SCARF1-203ENST00000434376 PARP2Q9UGN5 583 aa16.4■□□□□ 0.22
SCARF1-203ENST00000434376 PDHXO00330 501 aa16.4■□□□□ 0.22
SCARF1-203ENST00000434376 ARF4P18085 180 aaPredicted RBP16.4■□□□□ 0.22
SCARF1-203ENST00000434376 SLC8A1P32418 973 aa16.4■□□□□ 0.22
SCARF1-203ENST00000434376 BEX3Q00994 111 aa16.4■□□□□ 0.22
SCARF1-203ENST00000434376 TRIM68Q6AZZ1 485 aa16.4■□□□□ 0.22
SCARF1-203ENST00000434376 FAM71DQ8N9W8 422 aa16.4■□□□□ 0.22
SCARF1-203ENST00000434376 CEP41Q9BYV8 373 aa16.4■□□□□ 0.22
SCARF1-203ENST00000434376 SPON1Q9HCB6 807 aa16.4■□□□□ 0.22
SCARF1-203ENST00000434376 SNTG2Q9NY99 539 aa16.4■□□□□ 0.22
SCARF1-203ENST00000434376 SSC5DA1L4H1 1573 aa16.39■□□□□ 0.21
SCARF1-203ENST00000434376 LGALS2P05162 132 aa16.39■□□□□ 0.21
SCARF1-203ENST00000434376 OSBPP22059 807 aa16.39■□□□□ 0.21
SCARF1-203ENST00000434376 ATXN1P54253 815 aaKnown RBP16.39■□□□□ 0.21
SCARF1-203ENST00000434376 PAN2Q504Q3 1202 aaKnown RBP16.39■□□□□ 0.21
SCARF1-203ENST00000434376 MPZL3Q6UWV2 235 aa16.39■□□□□ 0.21
SCARF1-203ENST00000434376 CATSPER4Q7RTX7 472 aa16.39■□□□□ 0.21
SCARF1-203ENST00000434376 CCDC89Q8N998 374 aa16.39■□□□□ 0.21
SCARF1-203ENST00000434376 C18orf25Q96B23 403 aaPredicted RBP16.39■□□□□ 0.21
SCARF1-203ENST00000434376 CDHR5Q9HBB8 845 aa16.39■□□□□ 0.21
SCARF1-203ENST00000434376 FGFR1OP2Q9NVK5 253 aa16.39■□□□□ 0.21
SCARF1-203ENST00000434376 PRRC2BQ5JSZ5 2229 aaKnown RBP16.39■□□□□ 0.21
SCARF1-203ENST00000434376 TMEM120BA0PK00 339 aa16.39■□□□□ 0.21
SCARF1-203ENST00000434376 CCT8L1PA6NM43 557 aa16.39■□□□□ 0.21
SCARF1-203ENST00000434376 ATP6V1G2O95670 118 aa16.39■□□□□ 0.21
SCARF1-203ENST00000434376 MYCP01106 439 aaPredicted RBP16.39■□□□□ 0.21
SCARF1-203ENST00000434376 BRAFP15056 766 aa16.39■□□□□ 0.21
SCARF1-203ENST00000434376 ELF3P78545 371 aaPredicted RBP16.39■□□□□ 0.21
SCARF1-203ENST00000434376 CENPCQ03188 943 aa16.39■□□□□ 0.21
SCARF1-203ENST00000434376 ACTL9Q8TC94 416 aa16.39■□□□□ 0.21
SCARF1-203ENST00000434376 SPDL1Q96EA4 605 aa16.39■□□□□ 0.21
SCARF1-203ENST00000434376 SYT17Q9BSW7 474 aa16.39■□□□□ 0.21
SCARF1-203ENST00000434376 MYO18AQ92614 2054 aaKnown RBP16.39■□□□□ 0.21
SCARF1-203ENST00000434376 H3BRB1 525 aa16.39■□□□□ 0.21
SCARF1-203ENST00000434376 KIF1CO43896 1103 aaKnown RBP16.39■□□□□ 0.21
SCARF1-203ENST00000434376 DIAPH2O60879 1101 aa16.39■□□□□ 0.21
SCARF1-203ENST00000434376 CNMDO75829 334 aa16.39■□□□□ 0.21
SCARF1-203ENST00000434376 ITGBL1O95965 494 aaPredicted RBP16.39■□□□□ 0.21
SCARF1-203ENST00000434376 IL1R2P27930 398 aa16.39■□□□□ 0.21
SCARF1-203ENST00000434376 GDF10P55107 478 aa16.39■□□□□ 0.21
SCARF1-203ENST00000434376 PDIA2Q13087 525 aaKnown RBP16.39■□□□□ 0.21
SCARF1-203ENST00000434376 BYSLQ13895 437 aaKnown RBP16.39■□□□□ 0.21
SCARF1-203ENST00000434376 SGSM1Q2NKQ1 1148 aa16.39■□□□□ 0.21
SCARF1-203ENST00000434376 WDTC1Q8N5D0 677 aa16.39■□□□□ 0.21
SCARF1-203ENST00000434376 ATL2Q8NHH9 583 aa16.39■□□□□ 0.21
SCARF1-203ENST00000434376 FAM149B1Q96BN6 582 aa16.39■□□□□ 0.21
SCARF1-203ENST00000434376 SNF8Q96H20 258 aa16.39■□□□□ 0.21
SCARF1-203ENST00000434376 HPDLQ96IR7 371 aa16.39■□□□□ 0.21
SCARF1-203ENST00000434376 TUT1Q9H6E5 874 aaKnown RBP16.39■□□□□ 0.21
SCARF1-203ENST00000434376 ABCF3Q9NUQ8 709 aa16.39■□□□□ 0.21
SCARF1-203ENST00000434376 TCP11X1B4DZS4 312 aa16.38■□□□□ 0.21
SCARF1-203ENST00000434376 CES2O00748 559 aa16.38■□□□□ 0.21
SCARF1-203ENST00000434376 CLGNO14967 610 aa16.38■□□□□ 0.21
SCARF1-203ENST00000434376 PPFIA2O75334 1257 aa16.38■□□□□ 0.21
SCARF1-203ENST00000434376 HOXC6P09630 235 aa16.38■□□□□ 0.21
SCARF1-203ENST00000434376 CTSHP09668 335 aa16.38■□□□□ 0.21
SCARF1-203ENST00000434376 CETPP11597 493 aa16.38■□□□□ 0.21
SCARF1-203ENST00000434376 CYP2B6P20813 491 aa16.38■□□□□ 0.21
SCARF1-203ENST00000434376 DRD4P21917 467 aa16.38■□□□□ 0.21
SCARF1-203ENST00000434376 ERFP50548 548 aa16.38■□□□□ 0.21
SCARF1-203ENST00000434376 EFTUD2Q15029 972 aaKnown RBP eCLIP16.38■□□□□ 0.21
SCARF1-203ENST00000434376 LRIG3Q6UXM1 1119 aa16.38■□□□□ 0.21
SCARF1-203ENST00000434376 RSAD2Q8WXG1 361 aa16.38■□□□□ 0.21
SCARF1-203ENST00000434376 SPOCK2Q92563 424 aa16.38■□□□□ 0.21
SCARF1-203ENST00000434376 SMARCAD1Q9H4L7 1026 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms