RNA–Protein interactions for RNA: ENST00000433949.7

CTCFL-209, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-209ENST00000433949 BCO2Q9BYV7 579 aa12.64□□□□□ -0.39
CTCFL-209ENST00000433949 TRIM7Q9C029 511 aa12.64□□□□□ -0.39
CTCFL-209ENST00000433949 LHX5Q9H2C1 402 aa12.64□□□□□ -0.39
CTCFL-209ENST00000433949 PABPC3Q9H361 631 aaKnown RBP12.64□□□□□ -0.39
CTCFL-209ENST00000433949 GRHL1Q9NZI5 618 aa12.64□□□□□ -0.39
CTCFL-209ENST00000433949 WHRNQ9P202 907 aa12.64□□□□□ -0.39
CTCFL-209ENST00000433949 A0A087WZ62 844 aa12.63□□□□□ -0.39
CTCFL-209ENST00000433949 TCRBV7S2A1N4TA0A589 114 aa12.63□□□□□ -0.39
CTCFL-209ENST00000433949 TMEM191CA6NGB0 347 aa12.63□□□□□ -0.39
CTCFL-209ENST00000433949 NUDT17P0C025 328 aa12.63□□□□□ -0.39
CTCFL-209ENST00000433949 IQCF3P0C7M6 154 aa12.63□□□□□ -0.39
CTCFL-209ENST00000433949 STAG3L1P0CL83 205 aa12.63□□□□□ -0.39
CTCFL-209ENST00000433949 NR1D1P20393 614 aa12.63□□□□□ -0.39
CTCFL-209ENST00000433949 RPL21P46778 160 aaKnown RBP12.63□□□□□ -0.39
CTCFL-209ENST00000433949 OSTNP61366 133 aa12.63□□□□□ -0.39
CTCFL-209ENST00000433949 ZNF844Q08AG5 666 aa12.63□□□□□ -0.39
CTCFL-209ENST00000433949 ITGA7Q13683 1181 aa12.63□□□□□ -0.39
CTCFL-209ENST00000433949 PIGHQ14442 188 aaPredicted RBP12.63□□□□□ -0.39
CTCFL-209ENST00000433949 AMHR2Q16671 573 aa12.63□□□□□ -0.39
CTCFL-209ENST00000433949 DNAJC24Q6P3W2 148 aa12.63□□□□□ -0.39
CTCFL-209ENST00000433949 FBXO46Q6PJ61 603 aaPredicted RBP12.63□□□□□ -0.39
CTCFL-209ENST00000433949 APBB1IPQ7Z5R6 666 aaPredicted RBP12.63□□□□□ -0.39
CTCFL-209ENST00000433949 HOOK3Q86VS8 718 aa12.63□□□□□ -0.39
CTCFL-209ENST00000433949 ERICH1Q86X53 443 aa12.63□□□□□ -0.39
CTCFL-209ENST00000433949 CCDC50Q8IVM0 306 aa12.63□□□□□ -0.39
CTCFL-209ENST00000433949 CEP120Q8N960 986 aa12.63□□□□□ -0.39
CTCFL-209ENST00000433949 ARRDC4Q8NCT1 418 aa12.63□□□□□ -0.39
CTCFL-209ENST00000433949 C3orf20Q8ND61 904 aa12.63□□□□□ -0.39
CTCFL-209ENST00000433949 RBM41Q96IZ5 413 aaKnown RBP12.63□□□□□ -0.39
CTCFL-209ENST00000433949 FDXACB1Q9BRP7 624 aaPredicted RBP12.63□□□□□ -0.39
CTCFL-209ENST00000433949 ADPGKQ9BRR6 497 aa12.63□□□□□ -0.39
CTCFL-209ENST00000433949 CYP3A43Q9HB55 503 aa12.63□□□□□ -0.39
CTCFL-209ENST00000433949 PAK6Q9NQU5 681 aaPredicted RBP12.63□□□□□ -0.39
CTCFL-209ENST00000433949 TRMT13Q9NUP7 481 aaKnown RBP12.63□□□□□ -0.39
CTCFL-209ENST00000433949 ATP8A1Q9Y2Q0 1164 aa12.63□□□□□ -0.39
CTCFL-209ENST00000433949 KBTBD13C9JR72 458 aa12.62□□□□□ -0.39
CTCFL-209ENST00000433949 KRT19P08727 400 aa12.62□□□□□ -0.39
CTCFL-209ENST00000433949 CST5P28325 142 aaPredicted RBP12.62□□□□□ -0.39
CTCFL-209ENST00000433949 PMS2P54278 862 aa12.62□□□□□ -0.39
CTCFL-209ENST00000433949 HNRNPH2P55795 449 aaKnown RBP12.62□□□□□ -0.39
CTCFL-209ENST00000433949 CAV1Q03135 178 aa12.62□□□□□ -0.39
CTCFL-209ENST00000433949 IFFO1Q0D2I5 559 aa12.62□□□□□ -0.39
CTCFL-209ENST00000433949 C2CD6Q53TS8 623 aa12.62□□□□□ -0.39
CTCFL-209ENST00000433949 KCTD16Q68DU8 428 aa12.62□□□□□ -0.39
CTCFL-209ENST00000433949 DCUN1D2Q6PH85 259 aa12.62□□□□□ -0.39
CTCFL-209ENST00000433949 ZDHHC24Q6UX98 284 aa12.62□□□□□ -0.39
CTCFL-209ENST00000433949 ATL2Q8NHH9 583 aa12.62□□□□□ -0.39
CTCFL-209ENST00000433949 ART4Q93070 314 aa12.62□□□□□ -0.39
CTCFL-209ENST00000433949 CDHR5Q9HBB8 845 aa12.62□□□□□ -0.39
CTCFL-209ENST00000433949 STARD7Q9NQZ5 370 aa12.62□□□□□ -0.39
CTCFL-209ENST00000433949 C2CD2Q9Y426 696 aa12.62□□□□□ -0.39
CTCFL-209ENST00000433949 A0A1W2PQ45 241 aaPredicted RBP12.62□□□□□ -0.39
CTCFL-209ENST00000433949 A0A1W2PQY0 241 aa12.62□□□□□ -0.39
CTCFL-209ENST00000433949 WEE2P0C1S8 567 aa12.62□□□□□ -0.39
CTCFL-209ENST00000433949 ITIH2P19823 946 aa12.62□□□□□ -0.39
CTCFL-209ENST00000433949 FGFR4P22455 802 aa12.62□□□□□ -0.39
CTCFL-209ENST00000433949 BRD2P25440 801 aaKnown RBP12.62□□□□□ -0.39
CTCFL-209ENST00000433949 IRAK1P51617 712 aa12.62□□□□□ -0.39
CTCFL-209ENST00000433949 COPS2P61201 443 aa12.62□□□□□ -0.39
CTCFL-209ENST00000433949 LMNB2Q03252 620 aa12.62□□□□□ -0.39
CTCFL-209ENST00000433949 KLF1Q13351 362 aaPredicted RBP12.62□□□□□ -0.39
CTCFL-209ENST00000433949 PCBP1Q15365 356 aaKnown RBP eCLIP12.62□□□□□ -0.39
CTCFL-209ENST00000433949 CCNG2Q16589 344 aa12.62□□□□□ -0.39
CTCFL-209ENST00000433949 WDR72Q3MJ13 1102 aa12.62□□□□□ -0.39
CTCFL-209ENST00000433949 CDR2LQ86X02 465 aaPredicted RBP12.62□□□□□ -0.39
CTCFL-209ENST00000433949 RCOR2Q8IZ40 523 aa12.62□□□□□ -0.39
CTCFL-209ENST00000433949 NIPA2Q8N8Q9 360 aa12.62□□□□□ -0.39
CTCFL-209ENST00000433949 PDZD7Q9H5P4 517 aa12.62□□□□□ -0.39
CTCFL-209ENST00000433949 WDR35Q9P2L0 1181 aa12.62□□□□□ -0.39
CTCFL-209ENST00000433949 GTF2IRD1Q9UHL9 959 aa12.62□□□□□ -0.39
CTCFL-209ENST00000433949 TCRBV5S1A1TA0A578 114 aa12.61□□□□□ -0.39
CTCFL-209ENST00000433949 SRRM3A6NNA2 597 aaPredicted RBP12.61□□□□□ -0.39
CTCFL-209ENST00000433949 LACTBL1A8MY62 500 aa12.61□□□□□ -0.39
CTCFL-209ENST00000433949 EIF3HO15372 352 aaKnown RBP eCLIP12.61□□□□□ -0.39
CTCFL-209ENST00000433949 GNAT1P11488 350 aa12.61□□□□□ -0.39
CTCFL-209ENST00000433949 RARGP13631 454 aa12.61□□□□□ -0.39
CTCFL-209ENST00000433949 ARF4P18085 180 aaPredicted RBP12.61□□□□□ -0.39
CTCFL-209ENST00000433949 ATN1P54259 1190 aaPredicted RBP12.61□□□□□ -0.39
CTCFL-209ENST00000433949 GSCP56915 257 aaPredicted RBP12.61□□□□□ -0.39
CTCFL-209ENST00000433949 NKX3-2P78367 333 aa12.61□□□□□ -0.39
CTCFL-209ENST00000433949 ADAM17P78536 824 aa12.61□□□□□ -0.39
CTCFL-209ENST00000433949 KRT17Q04695 432 aa12.61□□□□□ -0.39
CTCFL-209ENST00000433949 PTK6Q13882 451 aa12.61□□□□□ -0.39
CTCFL-209ENST00000433949 PTGISQ16647 500 aa12.61□□□□□ -0.39
CTCFL-209ENST00000433949 ZNF394Q53GI3 561 aa12.61□□□□□ -0.39
CTCFL-209ENST00000433949 DENND2CQ68D51 928 aa12.61□□□□□ -0.39
CTCFL-209ENST00000433949 LRRC31Q6UY01 552 aa12.61□□□□□ -0.39
CTCFL-209ENST00000433949 C1orf127Q8N9H9 656 aa12.61□□□□□ -0.39
CTCFL-209ENST00000433949 WNT8BQ93098 351 aa12.61□□□□□ -0.39
CTCFL-209ENST00000433949 ZNF333Q96JL9 665 aa12.61□□□□□ -0.39
CTCFL-209ENST00000433949 OSBPL8Q9BZF1 889 aa12.61□□□□□ -0.39
CTCFL-209ENST00000433949 DCLK3Q9C098 648 aa12.61□□□□□ -0.39
CTCFL-209ENST00000433949 SENP6Q9GZR1 1112 aaPredicted RBP12.61□□□□□ -0.39
CTCFL-209ENST00000433949 DDX56Q9NY93 547 aaKnown RBP12.61□□□□□ -0.39
CTCFL-209ENST00000433949 NXF1Q9UBU9 619 aaKnown RBP12.61□□□□□ -0.39
CTCFL-209ENST00000433949 SIX4Q9UIU6 781 aa12.61□□□□□ -0.39
CTCFL-209ENST00000433949 ITGA11Q9UKX5 1188 aa12.61□□□□□ -0.39
CTCFL-209ENST00000433949 NOD1Q9Y239 953 aa12.61□□□□□ -0.39
CTCFL-209ENST00000433949 KIAA0100Q14667 2235 aaKnown RBP12.61□□□□□ -0.39
CTCFL-209ENST00000433949 A0A1B0GUA9 196 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms