RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 SLC47A2Q86VL8 602 aa7.91□□□□□ -1.14
COL17A1-204ENST00000433822 TAX1BP1Q86VP1 789 aa7.91□□□□□ -1.14
COL17A1-204ENST00000433822 BBOF1Q8ND07 529 aa7.91□□□□□ -1.14
COL17A1-204ENST00000433822 BCAS4Q8TDM0 211 aa7.91□□□□□ -1.14
COL17A1-204ENST00000433822 TCP11Q8WWU5 503 aa7.91□□□□□ -1.14
COL17A1-204ENST00000433822 SLC7A3Q8WY07 619 aa7.91□□□□□ -1.14
COL17A1-204ENST00000433822 KAT5Q92993 513 aa7.91□□□□□ -1.14
COL17A1-204ENST00000433822 MAGOHBQ96A72 148 aaKnown RBP7.91□□□□□ -1.14
COL17A1-204ENST00000433822 ZNF518BQ9C0D4 1074 aa7.91□□□□□ -1.14
COL17A1-204ENST00000433822 POLR3FQ9H1D9 316 aaPredicted RBP7.91□□□□□ -1.14
COL17A1-204ENST00000433822 C2orf40Q9H1Z8 148 aa7.91□□□□□ -1.14
COL17A1-204ENST00000433822 NEUROG2Q9H2A3 272 aa7.91□□□□□ -1.14
COL17A1-204ENST00000433822 ZNF302Q9NR11 478 aa7.91□□□□□ -1.14
COL17A1-204ENST00000433822 NRBP2Q9NSY0 501 aa7.91□□□□□ -1.14
COL17A1-204ENST00000433822 SEPT11Q9NVA2 429 aaKnown RBP7.91□□□□□ -1.14
COL17A1-204ENST00000433822 GPRC5DQ9NZD1 345 aa7.91□□□□□ -1.14
COL17A1-204ENST00000433822 GRHL1Q9NZI5 618 aa7.91□□□□□ -1.14
COL17A1-204ENST00000433822 CNOT8Q9UFF9 292 aaKnown RBP7.91□□□□□ -1.14
COL17A1-204ENST00000433822 AGO2Q9UKV8 859 aaKnown RBP7.91□□□□□ -1.14
COL17A1-204ENST00000433822 SCINQ9Y6U3 715 aa7.91□□□□□ -1.14
COL17A1-204ENST00000433822 POLR2AP24928 1970 aaKnown RBP7.9□□□□□ -1.14
COL17A1-204ENST00000433822 CNTNAP2Q9UHC6 1331 aa7.9□□□□□ -1.14
COL17A1-204ENST00000433822 A0A087WUV0 522 aaPredicted RBP7.9□□□□□ -1.14
COL17A1-204ENST00000433822 GOLGA8IPA6NC78 632 aa7.9□□□□□ -1.14
COL17A1-204ENST00000433822 C5orf60A6NFR6 353 aa7.9□□□□□ -1.14
COL17A1-204ENST00000433822 GOLGA8JA6NMD2 632 aa7.9□□□□□ -1.14
COL17A1-204ENST00000433822 M0R082 166 aa7.9□□□□□ -1.14
COL17A1-204ENST00000433822 MYO1FO00160 1098 aa7.9□□□□□ -1.14
COL17A1-204ENST00000433822 THAP12O43422 761 aa7.9□□□□□ -1.14
COL17A1-204ENST00000433822 ADCY3O60266 1144 aa7.9□□□□□ -1.14
COL17A1-204ENST00000433822 MAFO75444 373 aaPredicted RBP7.9□□□□□ -1.14
COL17A1-204ENST00000433822 LGR5O75473 907 aa7.9□□□□□ -1.14
COL17A1-204ENST00000433822 TCEA3O75764 348 aa7.9□□□□□ -1.14
COL17A1-204ENST00000433822 PROSCO94903 275 aa7.9□□□□□ -1.14
COL17A1-204ENST00000433822 SLC25A27O95847 323 aa7.9□□□□□ -1.14
COL17A1-204ENST00000433822 AGTP01019 485 aa7.9□□□□□ -1.14
COL17A1-204ENST00000433822 HLA-DRAP01903 254 aa7.9□□□□□ -1.14
COL17A1-204ENST00000433822 ITIH2P19823 946 aa7.9□□□□□ -1.14
COL17A1-204ENST00000433822 ACO1P21399 889 aaKnown RBP7.9□□□□□ -1.14
COL17A1-204ENST00000433822 GLRA2P23416 452 aa7.9□□□□□ -1.14
COL17A1-204ENST00000433822 CDH5P33151 784 aaPredicted RBP7.9□□□□□ -1.14
COL17A1-204ENST00000433822 PTPN7P35236 360 aa7.9□□□□□ -1.14
COL17A1-204ENST00000433822 CETN2P41208 172 aa7.9□□□□□ -1.14
COL17A1-204ENST00000433822 ALDH5A1P51649 535 aaPredicted RBP7.9□□□□□ -1.14
COL17A1-204ENST00000433822 ZNF132P52740 706 aa7.9□□□□□ -1.14
COL17A1-204ENST00000433822 PMS2P54278 862 aa7.9□□□□□ -1.14
COL17A1-204ENST00000433822 HMGCS2P54868 508 aa7.9□□□□□ -1.14
COL17A1-204ENST00000433822 GSCP56915 257 aaPredicted RBP7.9□□□□□ -1.14
COL17A1-204ENST00000433822 RNASE9P60153 205 aaKnown RBP7.9□□□□□ -1.14
COL17A1-204ENST00000433822 PPP2R2AP63151 447 aa7.9□□□□□ -1.14
COL17A1-204ENST00000433822 LMNB2Q03252 620 aa7.9□□□□□ -1.14
COL17A1-204ENST00000433822 POU5F1BQ06416 359 aa7.9□□□□□ -1.14
COL17A1-204ENST00000433822 MCL1Q07820 350 aa7.9□□□□□ -1.14
COL17A1-204ENST00000433822 PTK6Q13882 451 aa7.9□□□□□ -1.14
COL17A1-204ENST00000433822 MXD4Q14582 209 aaPredicted RBP7.9□□□□□ -1.14
COL17A1-204ENST00000433822 MESDQ14696 234 aa7.9□□□□□ -1.14
COL17A1-204ENST00000433822 PTGISQ16647 500 aa7.9□□□□□ -1.14
COL17A1-204ENST00000433822 IER5Q5VY09 327 aa7.9□□□□□ -1.14
COL17A1-204ENST00000433822 PLEKHA7Q6IQ23 1121 aa7.9□□□□□ -1.14
COL17A1-204ENST00000433822 DRICH1Q6PGQ1 229 aaPredicted RBP7.9□□□□□ -1.14
COL17A1-204ENST00000433822 CCDC137Q6PK04 289 aaKnown RBP7.9□□□□□ -1.14
COL17A1-204ENST00000433822 MON1BQ7L1V2 547 aa7.9□□□□□ -1.14
COL17A1-204ENST00000433822 WDR49Q8IV35 697 aa7.9□□□□□ -1.14
COL17A1-204ENST00000433822 BRSK2Q8IWQ3 736 aa7.9□□□□□ -1.14
COL17A1-204ENST00000433822 KATNAL2Q8IYT4 538 aa7.9□□□□□ -1.14
COL17A1-204ENST00000433822 ABRAQ8N0Z2 381 aa7.9□□□□□ -1.14
COL17A1-204ENST00000433822 GPC2Q8N158 579 aa7.9□□□□□ -1.14
COL17A1-204ENST00000433822 ANKRD35Q8N283 1001 aa7.9□□□□□ -1.14
COL17A1-204ENST00000433822 UBR7Q8N806 425 aa7.9□□□□□ -1.14
COL17A1-204ENST00000433822 PLPP7Q8NBV4 271 aa7.9□□□□□ -1.14
COL17A1-204ENST00000433822 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.9□□□□□ -1.14
COL17A1-204ENST00000433822 ZNF417Q8TAU3 575 aa7.9□□□□□ -1.14
COL17A1-204ENST00000433822 DEPTORQ8TB45 409 aa7.9□□□□□ -1.14
COL17A1-204ENST00000433822 CCHCR1Q8TD31 782 aa7.9□□□□□ -1.14
COL17A1-204ENST00000433822 KRT35Q92764 455 aa7.9□□□□□ -1.14
COL17A1-204ENST00000433822 ART4Q93070 314 aa7.9□□□□□ -1.14
COL17A1-204ENST00000433822 SAAL1Q96ER3 474 aa7.9□□□□□ -1.14
COL17A1-204ENST00000433822 BICD1Q96G01 975 aa7.9□□□□□ -1.14
COL17A1-204ENST00000433822 ZNF587Q96SQ5 575 aaPredicted RBP7.9□□□□□ -1.14
COL17A1-204ENST00000433822 IMPG2Q9BZV3 1241 aa7.9□□□□□ -1.14
COL17A1-204ENST00000433822 PHACTR1Q9C0D0 580 aa7.9□□□□□ -1.14
COL17A1-204ENST00000433822 CCDC134Q9H6E4 229 aa7.9□□□□□ -1.14
COL17A1-204ENST00000433822 EFR3BQ9Y2G0 817 aa7.9□□□□□ -1.14
COL17A1-204ENST00000433822 IGKV6-21A0A0C4DH24 114 aa7.89□□□□□ -1.15
COL17A1-204ENST00000433822 TMEM150BA6NC51 233 aa7.89□□□□□ -1.15
COL17A1-204ENST00000433822 K7ERI5 159 aa7.89□□□□□ -1.15
COL17A1-204ENST00000433822 NDUFAB1O14561 156 aa7.89□□□□□ -1.15
COL17A1-204ENST00000433822 CXCL11O14625 94 aa7.89□□□□□ -1.15
COL17A1-204ENST00000433822 TRAPPC3O43617 180 aa7.89□□□□□ -1.15
COL17A1-204ENST00000433822 TOM1L1O75674 476 aa7.89□□□□□ -1.15
COL17A1-204ENST00000433822 FARP2O94887 1054 aaPredicted RBP7.89□□□□□ -1.15
COL17A1-204ENST00000433822 ECEL1O95672 775 aa7.89□□□□□ -1.15
COL17A1-204ENST00000433822 GAS8O95995 478 aa7.89□□□□□ -1.15
COL17A1-204ENST00000433822 CLTAP09496 248 aa7.89□□□□□ -1.15
COL17A1-204ENST00000433822 PYGMP11217 842 aa7.89□□□□□ -1.15
COL17A1-204ENST00000433822 ATP5DP30049 168 aa7.89□□□□□ -1.15
COL17A1-204ENST00000433822 MAPK4P31152 587 aa7.89□□□□□ -1.15
COL17A1-204ENST00000433822 PIK3CAP42336 1068 aa7.89□□□□□ -1.15
COL17A1-204ENST00000433822 NSFP46459 744 aaKnown RBP7.89□□□□□ -1.15
COL17A1-204ENST00000433822 YWHAEP62258 255 aaKnown RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms