RNA–Protein interactions for RNA: ENST00000433709.6

HDAC9-213, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-213ENST00000433709 VIRMAQ69YN4 1812 aaKnown RBP6.95□□□□□ -1.3
HDAC9-213ENST00000433709 ARFGEF1Q9Y6D6 1849 aa6.95□□□□□ -1.3
HDAC9-213ENST00000433709 GLTPD2A6NH11 291 aa6.95□□□□□ -1.3
HDAC9-213ENST00000433709 MATN3O15232 486 aa6.95□□□□□ -1.3
HDAC9-213ENST00000433709 KCNQ3O43525 872 aa6.95□□□□□ -1.3
HDAC9-213ENST00000433709 EPHB1P54762 984 aa6.95□□□□□ -1.3
HDAC9-213ENST00000433709 SLC25A3Q00325 362 aa6.95□□□□□ -1.3
HDAC9-213ENST00000433709 DSC2Q02487 901 aa6.95□□□□□ -1.3
HDAC9-213ENST00000433709 NHLH2Q02577 135 aa6.95□□□□□ -1.3
HDAC9-213ENST00000433709 FOXE3Q13461 319 aa6.95□□□□□ -1.3
HDAC9-213ENST00000433709 CCDC93Q567U6 631 aa6.95□□□□□ -1.3
HDAC9-213ENST00000433709 RABL3Q5HYI8 236 aa6.95□□□□□ -1.3
HDAC9-213ENST00000433709 ZNF529Q6P280 563 aa6.95□□□□□ -1.3
HDAC9-213ENST00000433709 UBE3BQ7Z3V4 1068 aa6.95□□□□□ -1.3
HDAC9-213ENST00000433709 DCBLD1Q8N8Z6 715 aa6.95□□□□□ -1.3
HDAC9-213ENST00000433709 IFI44Q8TCB0 444 aa6.95□□□□□ -1.3
HDAC9-213ENST00000433709 CPT1CQ8TCG5 803 aa6.95□□□□□ -1.3
HDAC9-213ENST00000433709 JPH3Q8WXH2 748 aaPredicted RBP6.95□□□□□ -1.3
HDAC9-213ENST00000433709 ZNF503Q96F45 646 aa6.95□□□□□ -1.3
HDAC9-213ENST00000433709 CLPTM1LQ96KA5 538 aa6.95□□□□□ -1.3
HDAC9-213ENST00000433709 DMRTA2Q96SC8 542 aa6.95□□□□□ -1.3
HDAC9-213ENST00000433709 KRTAP9-3Q9BYQ3 159 aa6.95□□□□□ -1.3
HDAC9-213ENST00000433709 VPS33BQ9H267 617 aa6.95□□□□□ -1.3
HDAC9-213ENST00000433709 TAOK3Q9H2K8 898 aa6.95□□□□□ -1.3
HDAC9-213ENST00000433709 ZNF703Q9H7S9 590 aaPredicted RBP6.95□□□□□ -1.3
HDAC9-213ENST00000433709 ZIM2Q9NZV7 527 aa6.95□□□□□ -1.3
HDAC9-213ENST00000433709 EIF2B4Q9UI10 523 aaKnown RBP6.95□□□□□ -1.3
HDAC9-213ENST00000433709 RRP7AQ9Y3A4 280 aaKnown RBP6.95□□□□□ -1.3
HDAC9-213ENST00000433709 NRXN2Q9P2S2 1712 aa6.95□□□□□ -1.3
HDAC9-213ENST00000433709 DRGXA6NNA5 263 aa6.94□□□□□ -1.3
HDAC9-213ENST00000433709 TEX33O43247 280 aa6.94□□□□□ -1.3
HDAC9-213ENST00000433709 SGTAO43765 313 aa6.94□□□□□ -1.3
HDAC9-213ENST00000433709 SCAF4O95104 1147 aaKnown RBP6.94□□□□□ -1.3
HDAC9-213ENST00000433709 POU2F2P09086 479 aa6.94□□□□□ -1.3
HDAC9-213ENST00000433709 CT47B1P0C2W7 299 aaPredicted RBP6.94□□□□□ -1.3
HDAC9-213ENST00000433709 CTXN1P60606 82 aa6.94□□□□□ -1.3
HDAC9-213ENST00000433709 SEM1Q6ZVN7 128 aa6.94□□□□□ -1.3
HDAC9-213ENST00000433709 DRC7Q8IY82 874 aa6.94□□□□□ -1.3
HDAC9-213ENST00000433709 RBM17Q96I25 401 aaKnown RBP6.94□□□□□ -1.3
HDAC9-213ENST00000433709 MRGPRX4Q96LA9 322 aa6.94□□□□□ -1.3
HDAC9-213ENST00000433709 ZNF747Q9BV97 191 aa6.94□□□□□ -1.3
HDAC9-213ENST00000433709 GTPBP4Q9BZE4 634 aaKnown RBP6.94□□□□□ -1.3
HDAC9-213ENST00000433709 PRKRIP1Q9H875 184 aaPredicted RBP6.94□□□□□ -1.3
HDAC9-213ENST00000433709 FBXO34Q9NWN3 711 aa6.94□□□□□ -1.3
HDAC9-213ENST00000433709 PARPBPQ9NWS1 579 aa6.94□□□□□ -1.3
HDAC9-213ENST00000433709 G3BP2Q9UN86 482 aaKnown RBP6.94□□□□□ -1.3
HDAC9-213ENST00000433709 N4BP2Q86UW6 1770 aaPredicted RBP6.94□□□□□ -1.3
HDAC9-213ENST00000433709 SCN7AQ01118 1682 aa6.93□□□□□ -1.3
HDAC9-213ENST00000433709 TCRBV7S2A1N4TA0A589 114 aa6.93□□□□□ -1.3
HDAC9-213ENST00000433709 E2F8A0AVK6 867 aa6.93□□□□□ -1.3
HDAC9-213ENST00000433709 LRRC14BA6NHZ5 514 aa6.93□□□□□ -1.3
HDAC9-213ENST00000433709 CHL1O00533 1208 aa6.93□□□□□ -1.3
HDAC9-213ENST00000433709 POMCP01189 267 aa6.93□□□□□ -1.3
HDAC9-213ENST00000433709 MYL6BP14649 208 aa6.93□□□□□ -1.3
HDAC9-213ENST00000433709 TNFRSF1AP19438 455 aa6.93□□□□□ -1.3
HDAC9-213ENST00000433709 MGAT1P26572 445 aa6.93□□□□□ -1.3
HDAC9-213ENST00000433709 CHN2P52757 468 aa6.93□□□□□ -1.3
HDAC9-213ENST00000433709 ZNF280AP59817 542 aaPredicted RBP6.93□□□□□ -1.3
HDAC9-213ENST00000433709 RNASE9P60153 205 aaKnown RBP6.93□□□□□ -1.3
HDAC9-213ENST00000433709 GNAI1P63096 354 aa6.93□□□□□ -1.3
HDAC9-213ENST00000433709 UBXN2BQ14CS0 331 aa6.93□□□□□ -1.3
HDAC9-213ENST00000433709 LRRC41Q15345 812 aa6.93□□□□□ -1.3
HDAC9-213ENST00000433709 METRNLQ641Q3 311 aa6.93□□□□□ -1.3
HDAC9-213ENST00000433709 PPP4R3AQ6IN85 833 aa6.93□□□□□ -1.3
HDAC9-213ENST00000433709 USP45Q70EL2 814 aa6.93□□□□□ -1.3
HDAC9-213ENST00000433709 MED25Q71SY5 747 aa6.93□□□□□ -1.3
HDAC9-213ENST00000433709 PLXDC1Q8IUK5 500 aa6.93□□□□□ -1.3
HDAC9-213ENST00000433709 TPH2Q8IWU9 490 aa6.93□□□□□ -1.3
HDAC9-213ENST00000433709 PRR18Q8N4B5 295 aa6.93□□□□□ -1.3
HDAC9-213ENST00000433709 NGEFQ8N5V2 710 aa6.93□□□□□ -1.3
HDAC9-213ENST00000433709 SUPT20HQ8NEM7 779 aa6.93□□□□□ -1.3
HDAC9-213ENST00000433709 NSUN6Q8TEA1 469 aaKnown RBP6.93□□□□□ -1.3
HDAC9-213ENST00000433709 CACTINQ8WUQ7 758 aaKnown RBP6.93□□□□□ -1.3
HDAC9-213ENST00000433709 JDP2Q8WYK2 163 aa6.93□□□□□ -1.3
HDAC9-213ENST00000433709 NEU1Q99519 415 aa6.93□□□□□ -1.3
HDAC9-213ENST00000433709 HYPKQ9NX55 129 aa6.93□□□□□ -1.3
HDAC9-213ENST00000433709 MIS18AQ9NYP9 233 aa6.93□□□□□ -1.3
HDAC9-213ENST00000433709 DBF4Q9UBU7 674 aaPredicted RBP6.93□□□□□ -1.3
HDAC9-213ENST00000433709 CFAP20Q9Y6A4 193 aaKnown RBP6.93□□□□□ -1.3
HDAC9-213ENST00000433709 RIC1Q4ADV7 1423 aa6.93□□□□□ -1.3
HDAC9-213ENST00000433709 AHRRA9YTQ3 701 aa6.92□□□□□ -1.3
HDAC9-213ENST00000433709 KIAA0391O15091 583 aaKnown RBP6.92□□□□□ -1.3
HDAC9-213ENST00000433709 EIF2S2P20042 333 aaKnown RBP6.92□□□□□ -1.3
HDAC9-213ENST00000433709 SLC6A2P23975 617 aa6.92□□□□□ -1.3
HDAC9-213ENST00000433709 MIIPQ5JXC2 388 aa6.92□□□□□ -1.3
HDAC9-213ENST00000433709 TTC7BQ86TV6 843 aa6.92□□□□□ -1.3
HDAC9-213ENST00000433709 ZNF34Q8IZ26 560 aa6.92□□□□□ -1.3
HDAC9-213ENST00000433709 CRAMP1Q96RY5 1269 aa6.92□□□□□ -1.3
HDAC9-213ENST00000433709 NUP88Q99567 741 aaPredicted RBP6.92□□□□□ -1.3
HDAC9-213ENST00000433709 VRK1Q99986 396 aaPredicted RBP6.92□□□□□ -1.3
HDAC9-213ENST00000433709 UTP14AQ9BVJ6 771 aaKnown RBP6.92□□□□□ -1.3
HDAC9-213ENST00000433709 TEX101Q9BY14 249 aa6.92□□□□□ -1.3
HDAC9-213ENST00000433709 C11orf54Q9H0W9 315 aaPredicted RBP6.92□□□□□ -1.3
HDAC9-213ENST00000433709 CDH19Q9H159 772 aa6.92□□□□□ -1.3
HDAC9-213ENST00000433709 VPS11Q9H270 941 aa6.92□□□□□ -1.3
HDAC9-213ENST00000433709 ZNF768Q9H5H4 540 aaKnown RBP6.92□□□□□ -1.3
HDAC9-213ENST00000433709 DDX21Q9NR30 783 aaKnown RBP eCLIP6.92□□□□□ -1.3
HDAC9-213ENST00000433709 KIAA1551Q9HCM1 1747 aa6.92□□□□□ -1.3
HDAC9-213ENST00000433709 BRCA1P38398 1863 aaKnown RBP6.92□□□□□ -1.3
HDAC9-213ENST00000433709 TRIM24O15164 1050 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms