RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 LRRN2O75325 713 aa16.56■□□□□ 0.24
TREX1-201ENST00000433541 SOAT2O75908 522 aa16.56■□□□□ 0.24
TREX1-201ENST00000433541 CDK11BP21127 795 aaKnown RBP16.56■□□□□ 0.24
TREX1-201ENST00000433541 HOXA9P31269 272 aa16.56■□□□□ 0.24
TREX1-201ENST00000433541 EPHB3P54753 998 aa16.56■□□□□ 0.24
TREX1-201ENST00000433541 SMAD2Q15796 467 aaKnown RBP16.56■□□□□ 0.24
TREX1-201ENST00000433541 MAN2A1Q16706 1144 aa16.56■□□□□ 0.24
TREX1-201ENST00000433541 RTL10Q7L3V2 364 aa16.56■□□□□ 0.24
TREX1-201ENST00000433541 GRASPQ7Z6J2 395 aaPredicted RBP16.56■□□□□ 0.24
TREX1-201ENST00000433541 LRRTM3Q86VH5 581 aa16.56■□□□□ 0.24
TREX1-201ENST00000433541 PPM1KQ8N3J5 372 aa16.56■□□□□ 0.24
TREX1-201ENST00000433541 TTC9BQ8N6N2 239 aa16.56■□□□□ 0.24
TREX1-201ENST00000433541 ADAMTS19Q8TE59 1207 aa16.56■□□□□ 0.24
TREX1-201ENST00000433541 RPGRIP1Q96KN7 1286 aa16.56■□□□□ 0.24
TREX1-201ENST00000433541 ZNF512Q96ME7 567 aaPredicted RBP16.56■□□□□ 0.24
TREX1-201ENST00000433541 TUBGCP2Q9BSJ2 902 aa16.56■□□□□ 0.24
TREX1-201ENST00000433541 SDCBP2Q9H190 292 aa16.56■□□□□ 0.24
TREX1-201ENST00000433541 DPEP3Q9H4B8 488 aa16.56■□□□□ 0.24
TREX1-201ENST00000433541 POMKQ9H5K3 350 aa16.56■□□□□ 0.24
TREX1-201ENST00000433541 APOBEC3GQ9HC16 384 aaKnown RBP16.56■□□□□ 0.24
TREX1-201ENST00000433541 DENND4AQ7Z401 1863 aa16.56■□□□□ 0.24
TREX1-201ENST00000433541 PTPRDP23468 1912 aa16.55■□□□□ 0.24
TREX1-201ENST00000433541 ATP8B3O60423 1300 aa16.55■□□□□ 0.24
TREX1-201ENST00000433541 MYBPHLA2RUH7 354 aa16.55■□□□□ 0.24
TREX1-201ENST00000433541 BECN2A8MW95 431 aa16.55■□□□□ 0.24
TREX1-201ENST00000433541 P4HA2O15460 535 aa16.55■□□□□ 0.24
TREX1-201ENST00000433541 FAM163BP0C2L3 166 aa16.55■□□□□ 0.24
TREX1-201ENST00000433541 PTPN1P18031 435 aaKnown RBP16.55■□□□□ 0.24
TREX1-201ENST00000433541 EEF1GP26641 437 aaKnown RBP16.55■□□□□ 0.24
TREX1-201ENST00000433541 TUFMP49411 452 aaKnown RBP16.55■□□□□ 0.24
TREX1-201ENST00000433541 NDST1P52848 882 aa16.55■□□□□ 0.24
TREX1-201ENST00000433541 YWHAEP62258 255 aaKnown RBP16.55■□□□□ 0.24
TREX1-201ENST00000433541 ORC1Q13415 861 aa16.55■□□□□ 0.24
TREX1-201ENST00000433541 ZSCAN23Q3MJ62 389 aa16.55■□□□□ 0.24
TREX1-201ENST00000433541 CYP26C1Q6V0L0 522 aa16.55■□□□□ 0.24
TREX1-201ENST00000433541 SCN4BQ8IWT1 228 aa16.55■□□□□ 0.24
TREX1-201ENST00000433541 B3GALNT2Q8NCR0 500 aa16.55■□□□□ 0.24
TREX1-201ENST00000433541 TATDN2Q93075 761 aa16.55■□□□□ 0.24
TREX1-201ENST00000433541 MYLPFQ96A32 169 aa16.55■□□□□ 0.24
TREX1-201ENST00000433541 CORO1BQ9BR76 489 aa16.55■□□□□ 0.24
TREX1-201ENST00000433541 CRACR2AQ9BSW2 395 aa16.55■□□□□ 0.24
TREX1-201ENST00000433541 CYP3A43Q9HB55 503 aa16.55■□□□□ 0.24
TREX1-201ENST00000433541 TMLHEQ9NVH6 421 aa16.55■□□□□ 0.24
TREX1-201ENST00000433541 FANCLQ9NW38 375 aa16.55■□□□□ 0.24
TREX1-201ENST00000433541 CLUHO75153 1309 aa16.54■□□□□ 0.24
TREX1-201ENST00000433541 BMP1P13497 986 aa16.54■□□□□ 0.24
TREX1-201ENST00000433541 PTPN2P17706 415 aa16.54■□□□□ 0.24
TREX1-201ENST00000433541 TBXAS1P24557 533 aaPredicted RBP16.54■□□□□ 0.24
TREX1-201ENST00000433541 ANXA13P27216 316 aa16.54■□□□□ 0.24
TREX1-201ENST00000433541 GBP2P32456 591 aaPredicted RBP16.54■□□□□ 0.24
TREX1-201ENST00000433541 ZNF165P49910 485 aa16.54■□□□□ 0.24
TREX1-201ENST00000433541 CCDC142Q17RM4 750 aa16.54■□□□□ 0.24
TREX1-201ENST00000433541 PABPC1LQ4VXU2 614 aaKnown RBP16.54■□□□□ 0.24
TREX1-201ENST00000433541 ZNF394Q53GI3 561 aa16.54■□□□□ 0.24
TREX1-201ENST00000433541 TCP11X2Q5H9J9 407 aa16.54■□□□□ 0.24
TREX1-201ENST00000433541 GBP6Q6ZN66 633 aa16.54■□□□□ 0.24
TREX1-201ENST00000433541 GET4Q7L5D6 327 aaPredicted RBP16.54■□□□□ 0.24
TREX1-201ENST00000433541 LIMS2Q7Z4I7 341 aa16.54■□□□□ 0.24
TREX1-201ENST00000433541 ACOT1Q86TX2 421 aa16.54■□□□□ 0.24
TREX1-201ENST00000433541 IRF2BP1Q8IU81 584 aa16.54■□□□□ 0.24
TREX1-201ENST00000433541 FEZF2Q8TBJ5 459 aa16.54■□□□□ 0.24
TREX1-201ENST00000433541 SUSD6Q92537 303 aa16.54■□□□□ 0.24
TREX1-201ENST00000433541 ZNF707Q96C28 371 aaPredicted RBP16.54■□□□□ 0.24
TREX1-201ENST00000433541 PHF7Q9BWX1 381 aaPredicted RBP16.54■□□□□ 0.24
TREX1-201ENST00000433541 BCO2Q9BYV7 579 aa16.54■□□□□ 0.24
TREX1-201ENST00000433541 INTS2Q9H0H0 1204 aaKnown RBP16.54■□□□□ 0.24
TREX1-201ENST00000433541 CRISPLD1Q9H336 500 aa16.54■□□□□ 0.24
TREX1-201ENST00000433541 CRTAC1Q9NQ79 661 aa16.54■□□□□ 0.24
TREX1-201ENST00000433541 HCFC1R1Q9NWW0 138 aa16.54■□□□□ 0.24
TREX1-201ENST00000433541 TAB2Q9NYJ8 693 aa16.54■□□□□ 0.24
TREX1-201ENST00000433541 COQ4Q9Y3A0 265 aa16.54■□□□□ 0.24
TREX1-201ENST00000433541 NR2E1Q9Y466 385 aa16.54■□□□□ 0.24
TREX1-201ENST00000433541 SMTNL1A8MU46 457 aa16.53■□□□□ 0.24
TREX1-201ENST00000433541 MYL4P12829 197 aa16.53■□□□□ 0.24
TREX1-201ENST00000433541 BDNFP23560 247 aa16.53■□□□□ 0.24
TREX1-201ENST00000433541 CYP2F1P24903 491 aa16.53■□□□□ 0.24
TREX1-201ENST00000433541 MCCD1P59942 119 aaPredicted RBP16.53■□□□□ 0.24
TREX1-201ENST00000433541 RPL10AP62906 217 aaKnown RBP16.53■□□□□ 0.24
TREX1-201ENST00000433541 TPM4P67936 248 aa16.53■□□□□ 0.24
TREX1-201ENST00000433541 NTHL1P78549 312 aa16.53■□□□□ 0.24
TREX1-201ENST00000433541 CUL2Q13617 745 aa16.53■□□□□ 0.24
TREX1-201ENST00000433541 VWA3BQ502W6 1294 aa16.53■□□□□ 0.24
TREX1-201ENST00000433541 CYP4A22Q5TCH4 519 aa16.53■□□□□ 0.24
TREX1-201ENST00000433541 PDZD4Q76G19 769 aaPredicted RBP16.53■□□□□ 0.24
TREX1-201ENST00000433541 ITIH5Q86UX2 942 aa16.53■□□□□ 0.24
TREX1-201ENST00000433541 UNC93AQ86WB7 457 aa16.53■□□□□ 0.24
TREX1-201ENST00000433541 ADHFE1Q8IWW8 467 aa16.53■□□□□ 0.24
TREX1-201ENST00000433541 TTC39CQ8N584 583 aa16.53■□□□□ 0.24
TREX1-201ENST00000433541 TDRD5Q8NAT2 981 aaKnown RBP16.53■□□□□ 0.24
TREX1-201ENST00000433541 MYCBPAPQ8TBZ2 947 aa16.53■□□□□ 0.24
TREX1-201ENST00000433541 GIPC2Q8TF65 315 aa16.53■□□□□ 0.24
TREX1-201ENST00000433541 ACSF2Q96CM8 615 aaPredicted RBP16.53■□□□□ 0.24
TREX1-201ENST00000433541 UHRF1Q96T88 793 aaPredicted RBP16.53■□□□□ 0.24
TREX1-201ENST00000433541 ARID3AQ99856 593 aa16.53■□□□□ 0.24
TREX1-201ENST00000433541 LPIN3Q9BQK8 851 aa16.53■□□□□ 0.24
TREX1-201ENST00000433541 NT5C1AQ9BXI3 368 aa16.53■□□□□ 0.24
TREX1-201ENST00000433541 RHOBTB2Q9BYZ6 727 aa16.53■□□□□ 0.24
TREX1-201ENST00000433541 NDST4Q9H3R1 872 aa16.53■□□□□ 0.24
TREX1-201ENST00000433541 ASAH2Q9NR71 780 aa16.53■□□□□ 0.24
TREX1-201ENST00000433541 CISHQ9NSE2 258 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms