RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 ZNF707Q96C28 371 aaPredicted RBP6.19□□□□□ -1.42
HMGB3P24-201ENST00000433260 DHTKD1Q96HY7 919 aaPredicted RBP6.19□□□□□ -1.42
HMGB3P24-201ENST00000433260 ZNF512Q96ME7 567 aaPredicted RBP6.19□□□□□ -1.42
HMGB3P24-201ENST00000433260 NECTIN4Q96NY8 510 aa6.19□□□□□ -1.42
HMGB3P24-201ENST00000433260 GBP4Q96PP9 640 aa6.19□□□□□ -1.42
HMGB3P24-201ENST00000433260 SEPT5Q99719 369 aaPredicted RBP6.19□□□□□ -1.42
HMGB3P24-201ENST00000433260 RTP3Q9BQQ7 232 aa6.19□□□□□ -1.42
HMGB3P24-201ENST00000433260 CORO1BQ9BR76 489 aa6.19□□□□□ -1.42
HMGB3P24-201ENST00000433260 MRPL45Q9BRJ2 306 aaKnown RBP6.19□□□□□ -1.42
HMGB3P24-201ENST00000433260 PI4K2AQ9BTU6 479 aa6.19□□□□□ -1.42
HMGB3P24-201ENST00000433260 CRISPLD1Q9H336 500 aa6.19□□□□□ -1.42
HMGB3P24-201ENST00000433260 TMLHEQ9NVH6 421 aa6.19□□□□□ -1.42
HMGB3P24-201ENST00000433260 DDX43Q9NXZ2 648 aaKnown RBP6.19□□□□□ -1.42
HMGB3P24-201ENST00000433260 DNMT3BQ9UBC3 853 aaKnown RBP6.19□□□□□ -1.42
HMGB3P24-201ENST00000433260 PRKAG3Q9UGI9 489 aa6.19□□□□□ -1.42
HMGB3P24-201ENST00000433260 FBXW11Q9UKB1 542 aa6.19□□□□□ -1.42
HMGB3P24-201ENST00000433260 GTF3C4Q9UKN8 822 aa6.19□□□□□ -1.42
HMGB3P24-201ENST00000433260 DSEQ9UL01 958 aa6.19□□□□□ -1.42
HMGB3P24-201ENST00000433260 L1RE1Q9UN81 338 aa6.19□□□□□ -1.42
HMGB3P24-201ENST00000433260 CTNND2Q9UQB3 1225 aa6.19□□□□□ -1.42
HMGB3P24-201ENST00000433260 GPSM3Q9Y4H4 160 aa6.19□□□□□ -1.42
HMGB3P24-201ENST00000433260 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.19□□□□□ -1.42
HMGB3P24-201ENST00000433260 TSC2P49815 1807 aa6.18□□□□□ -1.42
HMGB3P24-201ENST00000433260 MYO10Q9HD67 2058 aa6.18□□□□□ -1.42
HMGB3P24-201ENST00000433260 ARHGEF37A1IGU5 675 aa6.18□□□□□ -1.42
HMGB3P24-201ENST00000433260 MYBPHLA2RUH7 354 aa6.18□□□□□ -1.42
HMGB3P24-201ENST00000433260 MTMR11A4FU01 709 aa6.18□□□□□ -1.42
HMGB3P24-201ENST00000433260 OR6C75A6NL08 312 aa6.18□□□□□ -1.42
HMGB3P24-201ENST00000433260 LOC730098B7Z3J9 87 aa6.18□□□□□ -1.42
HMGB3P24-201ENST00000433260 PSMA7O14818 248 aa6.18□□□□□ -1.42
HMGB3P24-201ENST00000433260 VNN1O95497 513 aa6.18□□□□□ -1.42
HMGB3P24-201ENST00000433260 VNN2O95498 520 aa6.18□□□□□ -1.42
HMGB3P24-201ENST00000433260 CYP11A1P05108 521 aa6.18□□□□□ -1.42
HMGB3P24-201ENST00000433260 ASGR2P07307 311 aa6.18□□□□□ -1.42
HMGB3P24-201ENST00000433260 HNRNPA1P09651 372 aaKnown RBP eCLIP6.18□□□□□ -1.42
HMGB3P24-201ENST00000433260 MYL4P12829 197 aa6.18□□□□□ -1.42
HMGB3P24-201ENST00000433260 GJA1P17302 382 aa6.18□□□□□ -1.42
HMGB3P24-201ENST00000433260 PAX3P23760 479 aa6.18□□□□□ -1.42
HMGB3P24-201ENST00000433260 FSHRP23945 695 aa6.18□□□□□ -1.42
HMGB3P24-201ENST00000433260 GNL1P36915 607 aaPredicted RBP6.18□□□□□ -1.42
HMGB3P24-201ENST00000433260 RAP1GAPP47736 663 aa6.18□□□□□ -1.42
HMGB3P24-201ENST00000433260 PSMC1P62191 440 aaKnown RBP6.18□□□□□ -1.42
HMGB3P24-201ENST00000433260 TNNC1P63316 161 aa6.18□□□□□ -1.42
HMGB3P24-201ENST00000433260 FKBP3Q00688 224 aaKnown RBP6.18□□□□□ -1.42
HMGB3P24-201ENST00000433260 MYL7Q01449 175 aa6.18□□□□□ -1.42
HMGB3P24-201ENST00000433260 CYP27A1Q02318 531 aa6.18□□□□□ -1.42
HMGB3P24-201ENST00000433260 PPP3CAQ08209 521 aa6.18□□□□□ -1.42
HMGB3P24-201ENST00000433260 ORC1Q13415 861 aa6.18□□□□□ -1.42
HMGB3P24-201ENST00000433260 MYBPC2Q14324 1141 aa6.18□□□□□ -1.42
HMGB3P24-201ENST00000433260 SGSM1Q2NKQ1 1148 aa6.18□□□□□ -1.42
HMGB3P24-201ENST00000433260 EDRF1Q3B7T1 1238 aa6.18□□□□□ -1.42
HMGB3P24-201ENST00000433260 MGAT5BQ3V5L5 792 aa6.18□□□□□ -1.42
HMGB3P24-201ENST00000433260 CCDC40Q4G0X9 1142 aa6.18□□□□□ -1.42
HMGB3P24-201ENST00000433260 DCAF17Q5H9S7 520 aaPredicted RBP6.18□□□□□ -1.42
HMGB3P24-201ENST00000433260 ZNF667Q5HYK9 610 aa6.18□□□□□ -1.42
HMGB3P24-201ENST00000433260 SDHAF4Q5VUM1 108 aa6.18□□□□□ -1.42
HMGB3P24-201ENST00000433260 TDRD10Q5VZ19 366 aaKnown RBP6.18□□□□□ -1.42
HMGB3P24-201ENST00000433260 TPGS2Q68CL5 300 aa6.18□□□□□ -1.42
HMGB3P24-201ENST00000433260 SPOPLQ6IQ16 392 aa6.18□□□□□ -1.42
HMGB3P24-201ENST00000433260 C15orf39Q6ZRI6 1047 aa6.18□□□□□ -1.42
HMGB3P24-201ENST00000433260 INTS8Q75QN2 995 aaKnown RBP6.18□□□□□ -1.42
HMGB3P24-201ENST00000433260 SV2AQ7L0J3 742 aa6.18□□□□□ -1.42
HMGB3P24-201ENST00000433260 GET4Q7L5D6 327 aaPredicted RBP6.18□□□□□ -1.42
HMGB3P24-201ENST00000433260 TCEAL8Q8IYN2 117 aa6.18□□□□□ -1.42
HMGB3P24-201ENST00000433260 DCP1BQ8IZD4 617 aaKnown RBP6.18□□□□□ -1.42
HMGB3P24-201ENST00000433260 ADGRF2Q8IZF7 708 aa6.18□□□□□ -1.42
HMGB3P24-201ENST00000433260 TTC9BQ8N6N2 239 aa6.18□□□□□ -1.42
HMGB3P24-201ENST00000433260 TOP6BLQ8N6T0 577 aa6.18□□□□□ -1.42
HMGB3P24-201ENST00000433260 ITFG1Q8TB96 612 aa6.18□□□□□ -1.42
HMGB3P24-201ENST00000433260 GPT2Q8TD30 523 aa6.18□□□□□ -1.42
HMGB3P24-201ENST00000433260 GIPC2Q8TF65 315 aa6.18□□□□□ -1.42
HMGB3P24-201ENST00000433260 RSAD2Q8WXG1 361 aa6.18□□□□□ -1.42
HMGB3P24-201ENST00000433260 ING5Q8WYH8 240 aa6.18□□□□□ -1.42
HMGB3P24-201ENST00000433260 ACSF2Q96CM8 615 aaPredicted RBP6.18□□□□□ -1.42
HMGB3P24-201ENST00000433260 MCRS1Q96EZ8 462 aa6.18□□□□□ -1.42
HMGB3P24-201ENST00000433260 DUSP9Q99956 384 aaKnown RBP6.18□□□□□ -1.42
HMGB3P24-201ENST00000433260 SRRTQ9BXP5 876 aaKnown RBP6.18□□□□□ -1.42
HMGB3P24-201ENST00000433260 OXCT2Q9BYC2 517 aaPredicted RBP6.18□□□□□ -1.42
HMGB3P24-201ENST00000433260 ZCWPW1Q9H0M4 648 aa6.18□□□□□ -1.42
HMGB3P24-201ENST00000433260 SNX25Q9H3E2 840 aa6.18□□□□□ -1.42
HMGB3P24-201ENST00000433260 CLSTN2Q9H4D0 955 aa6.18□□□□□ -1.42
HMGB3P24-201ENST00000433260 WDR6Q9NNW5 1121 aaKnown RBP6.18□□□□□ -1.42
HMGB3P24-201ENST00000433260 ZDHHC7Q9NXF8 308 aa6.18□□□□□ -1.42
HMGB3P24-201ENST00000433260 GDAP2Q9NXN4 497 aa6.18□□□□□ -1.42
HMGB3P24-201ENST00000433260 ABI2Q9NYB9 513 aaPredicted RBP6.18□□□□□ -1.42
HMGB3P24-201ENST00000433260 CEP72Q9P209 647 aa6.18□□□□□ -1.42
HMGB3P24-201ENST00000433260 AFF4Q9UHB7 1163 aaKnown RBP6.18□□□□□ -1.42
HMGB3P24-201ENST00000433260 MUTYHQ9UIF7 546 aa6.18□□□□□ -1.42
HMGB3P24-201ENST00000433260 NR2E1Q9Y466 385 aa6.18□□□□□ -1.42
HMGB3P24-201ENST00000433260 INSL5Q9Y5Q6 135 aa6.18□□□□□ -1.42
HMGB3P24-201ENST00000433260 LAMA3Q16787 3333 aa6.18□□□□□ -1.42
HMGB3P24-201ENST00000433260 NOTCH4Q99466 2003 aa6.17□□□□□ -1.42
HMGB3P24-201ENST00000433260 A8MXQ7 604 aa6.17□□□□□ -1.42
HMGB3P24-201ENST00000433260 GOLGA6L22H0YM25 854 aa6.17□□□□□ -1.42
HMGB3P24-201ENST00000433260 IKBKBO14920 756 aa6.17□□□□□ -1.42
HMGB3P24-201ENST00000433260 MAPK13O15264 365 aa6.17□□□□□ -1.42
HMGB3P24-201ENST00000433260 N4BP1O75113 896 aaKnown RBP6.17□□□□□ -1.42
HMGB3P24-201ENST00000433260 XYLBO75191 536 aa6.17□□□□□ -1.42
HMGB3P24-201ENST00000433260 C1RP00736 705 aa6.17□□□□□ -1.42
HMGB3P24-201ENST00000433260 HLA-DRAP01903 254 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms