RNA–Protein interactions for RNA: ENST00000432519.5

RFTN1-203, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-203ENST00000432519 PSMC1P62191 440 aaKnown RBP15.48■□□□□ 0.07
RFTN1-203ENST00000432519 PTPN11Q06124 597 aaPredicted RBP15.48■□□□□ 0.07
RFTN1-203ENST00000432519 QPCTQ16769 361 aa15.48■□□□□ 0.07
RFTN1-203ENST00000432519 SH3PXD2AQ5TCZ1 1133 aa15.48■□□□□ 0.07
RFTN1-203ENST00000432519 SPOCD1Q6ZMY3 1216 aa15.48■□□□□ 0.07
RFTN1-203ENST00000432519 IFNLR1Q8IU57 520 aaPredicted RBP15.48■□□□□ 0.07
RFTN1-203ENST00000432519 HPDLQ96IR7 371 aa15.48■□□□□ 0.07
RFTN1-203ENST00000432519 ZMAT2Q96NC0 199 aaKnown RBP15.48■□□□□ 0.07
RFTN1-203ENST00000432519 METTL5Q9NRN9 209 aaKnown RBP15.48■□□□□ 0.07
RFTN1-203ENST00000432519 GJD2Q9UKL4 321 aa15.48■□□□□ 0.07
RFTN1-203ENST00000432519 C3orf70A6NLC5 250 aaPredicted RBP15.48■□□□□ 0.07
RFTN1-203ENST00000432519 TULP2O00295 520 aa15.48■□□□□ 0.07
RFTN1-203ENST00000432519 MAGEB2O15479 319 aa15.48■□□□□ 0.07
RFTN1-203ENST00000432519 LIASO43766 372 aa15.48■□□□□ 0.07
RFTN1-203ENST00000432519 MICAL2O94851 1124 aa15.48■□□□□ 0.07
RFTN1-203ENST00000432519 KRT3P12035 628 aa15.48■□□□□ 0.07
RFTN1-203ENST00000432519 ATF2P15336 505 aa15.48■□□□□ 0.07
RFTN1-203ENST00000432519 ITIH2P19823 946 aa15.48■□□□□ 0.07
RFTN1-203ENST00000432519 DYNLT1P63172 113 aa15.48■□□□□ 0.07
RFTN1-203ENST00000432519 AUHQ13825 339 aaKnown RBP15.48■□□□□ 0.07
RFTN1-203ENST00000432519 NLRP14Q86W24 1093 aa15.48■□□□□ 0.07
RFTN1-203ENST00000432519 XYLT1Q86Y38 959 aa15.48■□□□□ 0.07
RFTN1-203ENST00000432519 EMID1Q96A84 441 aaPredicted RBP15.48■□□□□ 0.07
RFTN1-203ENST00000432519 LPIN3Q9BQK8 851 aa15.48■□□□□ 0.07
RFTN1-203ENST00000432519 ZNF518BQ9C0D4 1074 aa15.48■□□□□ 0.07
RFTN1-203ENST00000432519 NME7Q9Y5B8 376 aa15.48■□□□□ 0.07
RFTN1-203ENST00000432519 hCG_1818297A0A087WSY0 165 aa15.47■□□□□ 0.07
RFTN1-203ENST00000432519 A0A1B0GUA9 196 aa15.47■□□□□ 0.07
RFTN1-203ENST00000432519 GAS8O95995 478 aa15.47■□□□□ 0.07
RFTN1-203ENST00000432519 PSMA2P25787 234 aa15.47■□□□□ 0.07
RFTN1-203ENST00000432519 HOXA11P31270 313 aaPredicted RBP15.47■□□□□ 0.07
RFTN1-203ENST00000432519 CDKN2BP42772 138 aa15.47■□□□□ 0.07
RFTN1-203ENST00000432519 SLC25A11Q02978 314 aaKnown RBP15.47■□□□□ 0.07
RFTN1-203ENST00000432519 POU5F1BQ06416 359 aa15.47■□□□□ 0.07
RFTN1-203ENST00000432519 SLMAPQ14BN4 828 aa15.47■□□□□ 0.07
RFTN1-203ENST00000432519 TRNP1Q6NT89 227 aa15.47■□□□□ 0.07
RFTN1-203ENST00000432519 C10orf67Q8IYJ2 551 aa15.47■□□□□ 0.07
RFTN1-203ENST00000432519 ZNF473Q8WTR7 871 aaKnown RBP15.47■□□□□ 0.07
RFTN1-203ENST00000432519 TMEM176AQ96HP8 235 aa15.47■□□□□ 0.07
RFTN1-203ENST00000432519 MORF4L1Q9UBU8 362 aa15.47■□□□□ 0.07
RFTN1-203ENST00000432519 PCSK1NQ9UHG2 260 aa15.47■□□□□ 0.07
RFTN1-203ENST00000432519 ANAPC5Q9UJX4 755 aa15.47■□□□□ 0.07
RFTN1-203ENST00000432519 LOC102724159A0A0B4J2E5 919 aa15.47■□□□□ 0.07
RFTN1-203ENST00000432519 HCRTO43612 131 aa15.47■□□□□ 0.07
RFTN1-203ENST00000432519 GBP1P32455 592 aa15.47■□□□□ 0.07
RFTN1-203ENST00000432519 NDST1P52848 882 aa15.47■□□□□ 0.07
RFTN1-203ENST00000432519 ACVR2BQ13705 512 aa15.47■□□□□ 0.07
RFTN1-203ENST00000432519 GRB14Q14449 540 aa15.47■□□□□ 0.07
RFTN1-203ENST00000432519 TMEM132DQ14C87 1099 aa15.47■□□□□ 0.07
RFTN1-203ENST00000432519 PWP2Q15269 919 aaKnown RBP15.47■□□□□ 0.07
RFTN1-203ENST00000432519 P3H1Q32P28 736 aa15.47■□□□□ 0.07
RFTN1-203ENST00000432519 DUSP28Q4G0W2 176 aa15.47■□□□□ 0.07
RFTN1-203ENST00000432519 HP1BP3Q5SSJ5 553 aaPredicted RBP15.47■□□□□ 0.07
RFTN1-203ENST00000432519 RCOR2Q8IZ40 523 aa15.47■□□□□ 0.07
RFTN1-203ENST00000432519 MAIP1Q8WWC4 291 aa15.47■□□□□ 0.07
RFTN1-203ENST00000432519 PGM2Q96G03 612 aa15.47■□□□□ 0.07
RFTN1-203ENST00000432519 C9orf72Q96LT7 481 aa15.47■□□□□ 0.07
RFTN1-203ENST00000432519 TINF2Q9BSI4 451 aa15.47■□□□□ 0.07
RFTN1-203ENST00000432519 EIF2AQ9BY44 585 aaKnown RBP15.47■□□□□ 0.07
RFTN1-203ENST00000432519 SIGLEC16A6NMB1 481 aa15.46■□□□□ 0.07
RFTN1-203ENST00000432519 M0QYV0 167 aa15.46■□□□□ 0.07
RFTN1-203ENST00000432519 GPD2P43304 727 aa15.46■□□□□ 0.07
RFTN1-203ENST00000432519 YWHAEP62258 255 aaKnown RBP15.46■□□□□ 0.07
RFTN1-203ENST00000432519 GLRA4Q5JXX5 417 aa15.46■□□□□ 0.07
RFTN1-203ENST00000432519 IZUMO3Q5VZ72 239 aa15.46■□□□□ 0.07
RFTN1-203ENST00000432519 B4GALNT4Q76KP1 1039 aa15.46■□□□□ 0.07
RFTN1-203ENST00000432519 GSTA5Q7RTV2 222 aa15.46■□□□□ 0.07
RFTN1-203ENST00000432519 OR6J1Q8NGC5 347 aa15.46■□□□□ 0.07
RFTN1-203ENST00000432519 HEXIM2Q96MH2 286 aaKnown RBP15.46■□□□□ 0.07
RFTN1-203ENST00000432519 TMEM121Q9BTD3 319 aa15.46■□□□□ 0.07
RFTN1-203ENST00000432519 LHX5Q9H2C1 402 aa15.46■□□□□ 0.07
RFTN1-203ENST00000432519 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.46■□□□□ 0.07
RFTN1-203ENST00000432519 CEP83Q9Y592 693 aa15.46■□□□□ 0.07
RFTN1-203ENST00000432519 RGS16O15492 202 aaPredicted RBP15.46■□□□□ 0.07
RFTN1-203ENST00000432519 TRAPPC3O43617 180 aa15.46■□□□□ 0.07
RFTN1-203ENST00000432519 CDR1P51861 262 aa15.46■□□□□ 0.07
RFTN1-203ENST00000432519 GTF2A2P52657 109 aa15.46■□□□□ 0.07
RFTN1-203ENST00000432519 NRLP54845 237 aa15.46■□□□□ 0.07
RFTN1-203ENST00000432519 SF3A3Q12874 501 aaKnown RBP eCLIP15.46■□□□□ 0.07
RFTN1-203ENST00000432519 BYSLQ13895 437 aaKnown RBP15.46■□□□□ 0.07
RFTN1-203ENST00000432519 ZNF365Q70YC5 407 aa15.46■□□□□ 0.07
RFTN1-203ENST00000432519 HOOK3Q86VS8 718 aa15.46■□□□□ 0.07
RFTN1-203ENST00000432519 ARFGAP2Q8N6H7 521 aa15.46■□□□□ 0.07
RFTN1-203ENST00000432519 TRAIPQ9BWF2 469 aa15.46■□□□□ 0.07
RFTN1-203ENST00000432519 DPP3Q9NY33 737 aa15.46■□□□□ 0.07
RFTN1-203ENST00000432519 SNTG2Q9NY99 539 aa15.46■□□□□ 0.07
RFTN1-203ENST00000432519 NINJ2Q9NZG7 142 aa15.46■□□□□ 0.07
RFTN1-203ENST00000432519 ZNF148Q9UQR1 794 aa15.46■□□□□ 0.07
RFTN1-203ENST00000432519 TRIP12Q14669 1992 aaPredicted RBP15.46■□□□□ 0.06
RFTN1-203ENST00000432519 EBAG9O00559 213 aa15.45■□□□□ 0.06
RFTN1-203ENST00000432519 RASGRF2O14827 1237 aa15.45■□□□□ 0.06
RFTN1-203ENST00000432519 STRNO43815 780 aa15.45■□□□□ 0.06
RFTN1-203ENST00000432519 GRAP2O75791 330 aa15.45■□□□□ 0.06
RFTN1-203ENST00000432519 CHN1P15882 459 aa15.45■□□□□ 0.06
RFTN1-203ENST00000432519 PIGHQ14442 188 aaPredicted RBP15.45■□□□□ 0.06
RFTN1-203ENST00000432519 NIPA2Q8N8Q9 360 aa15.45■□□□□ 0.06
RFTN1-203ENST00000432519 GRK7Q8WTQ7 553 aa15.45■□□□□ 0.06
RFTN1-203ENST00000432519 KIF12Q96FN5 646 aa15.45■□□□□ 0.06
RFTN1-203ENST00000432519 RBM41Q96IZ5 413 aaKnown RBP15.45■□□□□ 0.06
RFTN1-203ENST00000432519 ACAP3Q96P50 834 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms