RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 LRRC3CA6NJW4 275 aa4.26□□□□□ -1.73
CLK1-204ENST00000432425 DNAJB5O75953 348 aa4.26□□□□□ -1.73
CLK1-204ENST00000432425 C1QL1O75973 258 aa4.26□□□□□ -1.73
CLK1-204ENST00000432425 NXPH3O95157 252 aa4.26□□□□□ -1.73
CLK1-204ENST00000432425 EBLN1P0CF75 366 aa4.26□□□□□ -1.73
CLK1-204ENST00000432425 ZFXP17010 805 aaPredicted RBP4.26□□□□□ -1.73
CLK1-204ENST00000432425 ZNF37AP17032 561 aaPredicted RBP4.26□□□□□ -1.73
CLK1-204ENST00000432425 RAB1AP62820 205 aa4.26□□□□□ -1.73
CLK1-204ENST00000432425 SATB1Q01826 763 aa4.26□□□□□ -1.73
CLK1-204ENST00000432425 NHLH1Q02575 133 aa4.26□□□□□ -1.73
CLK1-204ENST00000432425 BMPR2Q13873 1038 aa4.26□□□□□ -1.73
CLK1-204ENST00000432425 BOP1Q14137 746 aaKnown RBP4.26□□□□□ -1.73
CLK1-204ENST00000432425 TBCCQ15814 346 aa4.26□□□□□ -1.73
CLK1-204ENST00000432425 VPS53Q5VIR6 699 aa4.26□□□□□ -1.73
CLK1-204ENST00000432425 DAAM2Q86T65 1068 aa4.26□□□□□ -1.73
CLK1-204ENST00000432425 FAM109AQ8N4B1 249 aa4.26□□□□□ -1.73
CLK1-204ENST00000432425 ATRIPQ8WXE1 791 aa4.26□□□□□ -1.73
CLK1-204ENST00000432425 SARAFQ96BY9 339 aa4.26□□□□□ -1.73
CLK1-204ENST00000432425 CDH19Q9H159 772 aa4.26□□□□□ -1.73
CLK1-204ENST00000432425 STAP2Q9UGK3 403 aa4.26□□□□□ -1.73
CLK1-204ENST00000432425 WNT6Q9Y6F9 365 aa4.26□□□□□ -1.73
CLK1-204ENST00000432425 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.26□□□□□ -1.73
CLK1-204ENST00000432425 FNDC1Q4ZHG4 1894 aaPredicted RBP4.26□□□□□ -1.73
CLK1-204ENST00000432425 H3BML4 177 aa4.26□□□□□ -1.73
CLK1-204ENST00000432425 RFPL1O75677 317 aa4.26□□□□□ -1.73
CLK1-204ENST00000432425 ELFN1P0C7U0 828 aa4.26□□□□□ -1.73
CLK1-204ENST00000432425 HTR1BP28222 390 aa4.26□□□□□ -1.73
CLK1-204ENST00000432425 CCT8P50990 548 aa4.26□□□□□ -1.73
CLK1-204ENST00000432425 ZNF134P52741 427 aa4.26□□□□□ -1.73
CLK1-204ENST00000432425 EIF2B5Q13144 721 aaKnown RBP4.26□□□□□ -1.73
CLK1-204ENST00000432425 GTF2H3Q13889 308 aa4.26□□□□□ -1.73
CLK1-204ENST00000432425 IQCB1Q15051 598 aa4.26□□□□□ -1.73
CLK1-204ENST00000432425 ODR4Q5SWX8 454 aa4.26□□□□□ -1.73
CLK1-204ENST00000432425 ICE2Q659A1 982 aa4.26□□□□□ -1.73
CLK1-204ENST00000432425 ZNF551Q7Z340 670 aaPredicted RBP4.26□□□□□ -1.73
CLK1-204ENST00000432425 AMIGO2Q86SJ2 522 aa4.26□□□□□ -1.73
CLK1-204ENST00000432425 RASAL3Q86YV0 1011 aa4.26□□□□□ -1.73
CLK1-204ENST00000432425 TPH2Q8IWU9 490 aa4.26□□□□□ -1.73
CLK1-204ENST00000432425 PLBD2Q8NHP8 589 aa4.26□□□□□ -1.73
CLK1-204ENST00000432425 PIH1D1Q9NWS0 290 aaKnown RBP4.26□□□□□ -1.73
CLK1-204ENST00000432425 ZIM2Q9NZV7 527 aa4.26□□□□□ -1.73
CLK1-204ENST00000432425 SHROOM4Q9ULL8 1493 aa4.25□□□□□ -1.73
CLK1-204ENST00000432425 A0A088AWK7 358 aa4.25□□□□□ -1.73
CLK1-204ENST00000432425 MYO1CO00159 1063 aa4.25□□□□□ -1.73
CLK1-204ENST00000432425 UBXN7O94888 489 aa4.25□□□□□ -1.73
CLK1-204ENST00000432425 NDUFB7P17568 137 aa4.25□□□□□ -1.73
CLK1-204ENST00000432425 PXNP49023 591 aaPredicted RBP4.25□□□□□ -1.73
CLK1-204ENST00000432425 LILRA4P59901 499 aa4.25□□□□□ -1.73
CLK1-204ENST00000432425 ZNF618Q5T7W0 954 aa4.25□□□□□ -1.73
CLK1-204ENST00000432425 CELF5Q8N6W0 485 aaKnown RBP4.25□□□□□ -1.73
CLK1-204ENST00000432425 RFKQ969G6 155 aa4.25□□□□□ -1.73
CLK1-204ENST00000432425 ARHGEF3Q9NR81 526 aa4.25□□□□□ -1.73
CLK1-204ENST00000432425 DKK3Q9UBP4 350 aa4.25□□□□□ -1.73
CLK1-204ENST00000432425 GABBR1Q9UBS5 961 aa4.25□□□□□ -1.73
CLK1-204ENST00000432425 SHOC2Q9UQ13 582 aa4.25□□□□□ -1.73
CLK1-204ENST00000432425 TMX2Q9Y320 296 aa4.25□□□□□ -1.73
CLK1-204ENST00000432425 SETD1BQ9UPS6 1966 aaKnown RBP4.24□□□□□ -1.73
CLK1-204ENST00000432425 A0A1W2PPL8 197 aa4.24□□□□□ -1.73
CLK1-204ENST00000432425 DCLK1O15075 740 aa4.24□□□□□ -1.73
CLK1-204ENST00000432425 PPM1DO15297 605 aa4.24□□□□□ -1.73
CLK1-204ENST00000432425 SLC16A3O15427 465 aaKnown RBP4.24□□□□□ -1.73
CLK1-204ENST00000432425 TLR5O60602 858 aa4.24□□□□□ -1.73
CLK1-204ENST00000432425 THP07101 528 aa4.24□□□□□ -1.73
CLK1-204ENST00000432425 U2AF1L5P0DN76 240 aaPredicted RBP4.24□□□□□ -1.73
CLK1-204ENST00000432425 PPIFP30405 207 aaKnown RBP4.24□□□□□ -1.73
CLK1-204ENST00000432425 VIPR2P41587 438 aa4.24□□□□□ -1.73
CLK1-204ENST00000432425 ALDH9A1P49189 494 aa4.24□□□□□ -1.73
CLK1-204ENST00000432425 U2AF1Q01081 240 aaKnown RBP eCLIP4.24□□□□□ -1.731e-7■■■□□ 17.6
CLK1-204ENST00000432425 ARHGAP40Q5TG30 622 aa4.24□□□□□ -1.73
CLK1-204ENST00000432425 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.24□□□□□ -1.73
CLK1-204ENST00000432425 PPP1R35Q8TAP8 253 aa4.24□□□□□ -1.73
CLK1-204ENST00000432425 SLC35G2Q8TBE7 412 aa4.24□□□□□ -1.73
CLK1-204ENST00000432425 ACO2Q99798 780 aaKnown RBP4.24□□□□□ -1.73
CLK1-204ENST00000432425 PTDSS2Q9BVG9 487 aa4.24□□□□□ -1.73
CLK1-204ENST00000432425 SERHLQ9NQF3 203 aa4.24□□□□□ -1.73
CLK1-204ENST00000432425 XPR1Q9UBH6 696 aa4.24□□□□□ -1.73
CLK1-204ENST00000432425 PADI4Q9UM07 663 aa4.24□□□□□ -1.73
CLK1-204ENST00000432425 MED16Q9Y2X0 877 aa4.24□□□□□ -1.73
CLK1-204ENST00000432425 S100BP04271 92 aaPredicted RBP4.23□□□□□ -1.73
CLK1-204ENST00000432425 PDHA1P08559 390 aa4.23□□□□□ -1.73
CLK1-204ENST00000432425 E2F2Q14209 437 aa4.23□□□□□ -1.73
CLK1-204ENST00000432425 B3GNT9Q6UX72 402 aa4.23□□□□□ -1.73
CLK1-204ENST00000432425 ZNF783Q6ZMS7 281 aa4.23□□□□□ -1.73
CLK1-204ENST00000432425 ZNF788Q6ZQV5 615 aa4.23□□□□□ -1.73
CLK1-204ENST00000432425 PTF1AQ7RTS3 328 aa4.23□□□□□ -1.73
CLK1-204ENST00000432425 DTX2Q86UW9 622 aa4.23□□□□□ -1.73
CLK1-204ENST00000432425 ZBTB34Q8NCN2 500 aa4.23□□□□□ -1.73
CLK1-204ENST00000432425 TAAR9Q96RI9 348 aa4.23□□□□□ -1.73
CLK1-204ENST00000432425 P2RX7Q99572 595 aaKnown RBP4.23□□□□□ -1.73
CLK1-204ENST00000432425 SERTAD4Q9NUC0 356 aa4.23□□□□□ -1.73
CLK1-204ENST00000432425 SERTAD3Q9UJW9 196 aa4.23□□□□□ -1.73
CLK1-204ENST00000432425 MARCH6O60337 910 aa4.22□□□□□ -1.73
CLK1-204ENST00000432425 RBMXL2O75526 392 aaKnown RBP4.22□□□□□ -1.73
CLK1-204ENST00000432425 XRCC6P12956 609 aaKnown RBP eCLIP4.22□□□□□ -1.73
CLK1-204ENST00000432425 DRD4P21917 467 aa4.22□□□□□ -1.73
CLK1-204ENST00000432425 ITPKBP27987 946 aa4.22□□□□□ -1.73
CLK1-204ENST00000432425 CLCN2P51788 898 aa4.22□□□□□ -1.73
CLK1-204ENST00000432425 UCP3P55916 312 aa4.22□□□□□ -1.73
CLK1-204ENST00000432425 PLEKHG6Q3KR16 790 aa4.22□□□□□ -1.73
CLK1-204ENST00000432425 COLEC12Q5KU26 742 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms