RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 RMDN2Q96LZ7 410 aa8.51□□□□□ -1.05
VTI1A-202ENST00000432306 FOXP3Q9BZS1 431 aa8.51□□□□□ -1.05
VTI1A-202ENST00000432306 CDC42EP4Q9H3Q1 356 aaKnown RBP8.51□□□□□ -1.05
VTI1A-202ENST00000432306 RASSF1Q9NS23 344 aa8.51□□□□□ -1.05
VTI1A-202ENST00000432306 GCNT4Q9P109 453 aa8.51□□□□□ -1.05
VTI1A-202ENST00000432306 DDX25Q9UHL0 483 aaKnown RBP8.51□□□□□ -1.05
VTI1A-202ENST00000432306 LNPEPQ9UIQ6 1025 aa8.51□□□□□ -1.05
VTI1A-202ENST00000432306 PCDHA12Q9UN75 941 aa8.51□□□□□ -1.05
VTI1A-202ENST00000432306 ALG6Q9Y672 507 aa8.51□□□□□ -1.05
VTI1A-202ENST00000432306 PTCH2Q9Y6C5 1203 aa8.51□□□□□ -1.05
VTI1A-202ENST00000432306 UBE4BO95155 1302 aa8.51□□□□□ -1.05
VTI1A-202ENST00000432306 IGSF9BQ9UPX0 1349 aa8.51□□□□□ -1.05
VTI1A-202ENST00000432306 TRIOBPQ9H2D6 2365 aa8.51□□□□□ -1.05
VTI1A-202ENST00000432306 LRRD1A4D1F6 860 aa8.51□□□□□ -1.05
VTI1A-202ENST00000432306 SIGLEC16A6NMB1 481 aa8.51□□□□□ -1.05
VTI1A-202ENST00000432306 C19orf81C9J6K1 198 aa8.51□□□□□ -1.05
VTI1A-202ENST00000432306 CDH16O75309 829 aa8.51□□□□□ -1.05
VTI1A-202ENST00000432306 TTC4O95801 387 aa8.51□□□□□ -1.05
VTI1A-202ENST00000432306 ALDH1A1P00352 501 aa8.51□□□□□ -1.05
VTI1A-202ENST00000432306 GZMAP12544 262 aa8.51□□□□□ -1.05
VTI1A-202ENST00000432306 NAT1P18440 290 aa8.51□□□□□ -1.05
VTI1A-202ENST00000432306 OCRLQ01968 901 aa8.51□□□□□ -1.05
VTI1A-202ENST00000432306 SPIRE1Q08AE8 756 aa8.51□□□□□ -1.05
VTI1A-202ENST00000432306 STRN3Q13033 797 aa8.51□□□□□ -1.05
VTI1A-202ENST00000432306 ANGEL2Q5VTE6 544 aaKnown RBP8.51□□□□□ -1.05
VTI1A-202ENST00000432306 PTCRAQ6ISU1 281 aaPredicted RBP8.51□□□□□ -1.05
VTI1A-202ENST00000432306 C15orf52Q6ZUT6 534 aaKnown RBP8.51□□□□□ -1.05
VTI1A-202ENST00000432306 RNF180Q86T96 592 aa8.51□□□□□ -1.05
VTI1A-202ENST00000432306 GPBP1Q86WP2 473 aa8.51□□□□□ -1.05
VTI1A-202ENST00000432306 ECHDC2Q86YB7 292 aa8.51□□□□□ -1.05
VTI1A-202ENST00000432306 TDRPQ86YL5 185 aa8.51□□□□□ -1.05
VTI1A-202ENST00000432306 NELFCDQ8IXH7 590 aa8.51□□□□□ -1.05
VTI1A-202ENST00000432306 SLFN12Q8IYM2 578 aa8.51□□□□□ -1.05
VTI1A-202ENST00000432306 CELF2-AS1Q8N7Q2 184 aa8.51□□□□□ -1.05
VTI1A-202ENST00000432306 AGBL3Q8NEM8 1001 aa8.51□□□□□ -1.05
VTI1A-202ENST00000432306 WDR66Q8TBY9 1149 aa8.51□□□□□ -1.05
VTI1A-202ENST00000432306 CRYGNQ8WXF5 182 aa8.51□□□□□ -1.05
VTI1A-202ENST00000432306 GJA10Q969M2 543 aa8.51□□□□□ -1.05
VTI1A-202ENST00000432306 C18orf8Q96DM3 657 aa8.51□□□□□ -1.05
VTI1A-202ENST00000432306 DYNLL2Q96FJ2 89 aa8.51□□□□□ -1.05
VTI1A-202ENST00000432306 BICD1Q96G01 975 aa8.51□□□□□ -1.05
VTI1A-202ENST00000432306 FAM210AQ96ND0 272 aa8.51□□□□□ -1.05
VTI1A-202ENST00000432306 OCSTAMPQ9BR26 566 aa8.51□□□□□ -1.05
VTI1A-202ENST00000432306 TRIM31Q9BZY9 425 aa8.51□□□□□ -1.05
VTI1A-202ENST00000432306 PAPOLBQ9NRJ5 636 aaKnown RBP8.51□□□□□ -1.05
VTI1A-202ENST00000432306 CPSF2Q9P2I0 782 aaKnown RBP8.51□□□□□ -1.05
VTI1A-202ENST00000432306 MTUS1Q9ULD2 1270 aa8.51□□□□□ -1.05
VTI1A-202ENST00000432306 STX8Q9UNK0 236 aa8.51□□□□□ -1.05
VTI1A-202ENST00000432306 COG5Q9UP83 839 aa8.51□□□□□ -1.05
VTI1A-202ENST00000432306 TTLL3Q9Y4R7 772 aa8.51□□□□□ -1.05
VTI1A-202ENST00000432306 USH1CQ9Y6N9 552 aa8.51□□□□□ -1.05
VTI1A-202ENST00000432306 MYO3BQ8WXR4 1341 aa8.51□□□□□ -1.05
VTI1A-202ENST00000432306 IGKV6D-41A0A0C4DH26 115 aa8.5□□□□□ -1.05
VTI1A-202ENST00000432306 DPPA5A6NC42 116 aa8.5□□□□□ -1.05
VTI1A-202ENST00000432306 A8MUI8 341 aa8.5□□□□□ -1.05
VTI1A-202ENST00000432306 E9PMD0 336 aa8.5□□□□□ -1.05
VTI1A-202ENST00000432306 FSCN2O14926 492 aa8.5□□□□□ -1.05
VTI1A-202ENST00000432306 PMM2O15305 246 aa8.5□□□□□ -1.05
VTI1A-202ENST00000432306 LGR5O75473 907 aa8.5□□□□□ -1.05
VTI1A-202ENST00000432306 DCTN3O75935 186 aa8.5□□□□□ -1.05
VTI1A-202ENST00000432306 AGR2O95994 175 aa8.5□□□□□ -1.05
VTI1A-202ENST00000432306 NR3C1P04150 777 aa8.5□□□□□ -1.05
VTI1A-202ENST00000432306 RPL17P18621 184 aaKnown RBP8.5□□□□□ -1.05
VTI1A-202ENST00000432306 TAC1P20366 129 aa8.5□□□□□ -1.05
VTI1A-202ENST00000432306 IVDP26440 423 aa8.5□□□□□ -1.05
VTI1A-202ENST00000432306 RPA1P27694 616 aa8.5□□□□□ -1.05
VTI1A-202ENST00000432306 EIF1AXP47813 144 aaKnown RBP8.5□□□□□ -1.05
VTI1A-202ENST00000432306 CASP5P51878 434 aa8.5□□□□□ -1.05
VTI1A-202ENST00000432306 SNX16P57768 344 aa8.5□□□□□ -1.05
VTI1A-202ENST00000432306 ROR1Q01973 937 aa8.5□□□□□ -1.05
VTI1A-202ENST00000432306 KLC1Q07866 573 aa8.5□□□□□ -1.05
VTI1A-202ENST00000432306 CTTNQ14247 550 aaKnown RBP8.5□□□□□ -1.05
VTI1A-202ENST00000432306 DDR2Q16832 855 aa8.5□□□□□ -1.05
VTI1A-202ENST00000432306 CEP128Q6ZU80 1094 aa8.5□□□□□ -1.05
VTI1A-202ENST00000432306 MIGA2Q7L4E1 593 aa8.5□□□□□ -1.05
VTI1A-202ENST00000432306 SDCCAG8Q86SQ7 713 aaPredicted RBP8.5□□□□□ -1.05
VTI1A-202ENST00000432306 SLC13A5Q86YT5 568 aaPredicted RBP8.5□□□□□ -1.05
VTI1A-202ENST00000432306 SLC9A9Q8IVB4 645 aa8.5□□□□□ -1.05
VTI1A-202ENST00000432306 AFAP1L2Q8N4X5 818 aa8.5□□□□□ -1.05
VTI1A-202ENST00000432306 DRAXINQ8NBI3 349 aaPredicted RBP8.5□□□□□ -1.05
VTI1A-202ENST00000432306 RBBP8NLQ8NC74 664 aaPredicted RBP8.5□□□□□ -1.05
VTI1A-202ENST00000432306 FAM13CQ8NE31 585 aa8.5□□□□□ -1.05
VTI1A-202ENST00000432306 PARD3BQ8TEW8 1205 aa8.5□□□□□ -1.05
VTI1A-202ENST00000432306 DYDC1Q8WWB3 177 aa8.5□□□□□ -1.05
VTI1A-202ENST00000432306 TIFAQ96CG3 184 aa8.5□□□□□ -1.05
VTI1A-202ENST00000432306 SLC7A6OSQ96CW6 309 aaPredicted RBP8.5□□□□□ -1.05
VTI1A-202ENST00000432306 ARHGEF26Q96DR7 871 aa8.5□□□□□ -1.05
VTI1A-202ENST00000432306 TSC22D3Q99576 134 aa8.5□□□□□ -1.05
VTI1A-202ENST00000432306 ZC3H12CQ9C0D7 883 aaKnown RBP8.5□□□□□ -1.05
VTI1A-202ENST00000432306 SLC6A16Q9GZN6 736 aa8.5□□□□□ -1.05
VTI1A-202ENST00000432306 DCLRE1BQ9H816 532 aa8.5□□□□□ -1.05
VTI1A-202ENST00000432306 ETNK1Q9HBU6 452 aa8.5□□□□□ -1.05
VTI1A-202ENST00000432306 SAR1AQ9NR31 198 aa8.5□□□□□ -1.05
VTI1A-202ENST00000432306 GINM1Q9NU53 330 aa8.5□□□□□ -1.05
VTI1A-202ENST00000432306 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.5□□□□□ -1.059e-7■■■■□ 22.5
VTI1A-202ENST00000432306 DMAC2Q9NW81 257 aa8.5□□□□□ -1.05
VTI1A-202ENST00000432306 CTTNBP2NLQ9P2B4 639 aa8.5□□□□□ -1.05
VTI1A-202ENST00000432306 XPO7Q9UIA9 1087 aaKnown RBP8.5□□□□□ -1.05
VTI1A-202ENST00000432306 MYH4Q9Y623 1939 aa8.49□□□□□ -1.05
VTI1A-202ENST00000432306 IPO5O00410 1097 aaKnown RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms