RNA–Protein interactions for RNA: ENST00000432012.1

NIPAL3-205, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 2,714 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-205ENST00000432012 SPATA20Q8TB22 786 aa6.64□□□□□ -1.35
NIPAL3-205ENST00000432012 DEPTORQ8TB45 409 aa6.64□□□□□ -1.35
NIPAL3-205ENST00000432012 RBM18Q96H35 190 aaKnown RBP6.64□□□□□ -1.35
NIPAL3-205ENST00000432012 MAGED2Q9UNF1 606 aaPredicted RBP6.64□□□□□ -1.35
NIPAL3-205ENST00000432012 MINPP1Q9UNW1 487 aa6.64□□□□□ -1.35
NIPAL3-205ENST00000432012 LRRC37A2A6NM11 1700 aa6.64□□□□□ -1.35
NIPAL3-205ENST00000432012 C17orf113A0A1B0GUU1 675 aa6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 CLRN2A0PK11 232 aa6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 TTC24A2A3L6 582 aaPredicted RBP6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 B4E1Z4 1266 aa6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 ARNTLO00327 626 aa6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 TEX33O43247 280 aa6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 ZNF862O60290 1169 aa6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 MFAP3LO75121 409 aa6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 CNOT4O95628 575 aaKnown RBP6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 MMP1P03956 469 aa6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 MAPK4P31152 587 aa6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 PBX1P40424 430 aa6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 MRPS35P82673 323 aaKnown RBP6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 MMEL1Q495T6 779 aa6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 PPM1JQ5JR12 505 aa6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 FAM209BQ5JX69 171 aa6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 NFXL1Q6ZNB6 911 aa6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 TRIM67Q6ZTA4 783 aa6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 APTXQ7Z2E3 356 aaKnown RBP6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 CISD2Q8N5K1 135 aaKnown RBP6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 IGDCC4Q8TDY8 1250 aa6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 WASF1Q92558 559 aa6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 MFSD14AQ96MC6 490 aa6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 TEPSINQ96N21 525 aa6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 ZNF341Q9BYN7 854 aa6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 GBP3Q9H0R5 595 aa6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 CRISPLD1Q9H336 500 aa6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 LY9Q9HBG7 655 aa6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 DMRT3Q9NQL9 472 aa6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 TJP2Q9UDY2 1190 aa6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 CGGBP1Q9UFW8 167 aaPredicted RBP6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 NAGPAQ9UK23 515 aa6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 PCDHGB4Q9UN71 923 aa6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 PCDHA11Q9Y5I1 949 aa6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 MYO5AQ9Y4I1 1855 aaKnown RBP6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 BTBD18B2RXH4 712 aa6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 EFCAB14O75071 495 aa6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 N4BP1O75113 896 aaKnown RBP6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 ALDH2P05091 517 aa6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 MAPTP10636 758 aaKnown RBP6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 JUPP14923 745 aa6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 STAT1P42224 750 aa6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 RTP1P59025 263 aa6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 VSNL1P62760 191 aa6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 TNFAIP2Q03169 654 aa6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 TRIM28Q13263 835 aaKnown RBP6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 CASP8Q14790 479 aa6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 WHAMMP3Q1A5X7 153 aa6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 FAM110CQ1W6H9 321 aa6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 GTF2IRD2BQ6EKJ0 949 aa6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 FSTL4Q6MZW2 842 aa6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 LYSMD3Q7Z3D4 306 aa6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 MTDHQ86UE4 582 aaKnown RBP6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 GTF2IRD2Q86UP8 949 aa6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 VSIG1Q86XK7 387 aa6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 DIS3L2Q8IYB7 885 aaKnown RBP6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 FAM71BQ8TC56 605 aa6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 HPS1Q92902 700 aa6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 SLC5A5Q92911 643 aa6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 HPS3Q969F9 1004 aa6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 ELMO3Q96BJ8 720 aa6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 CTAGE1Q96RT6 745 aa6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 WRNIP1Q96S55 665 aa6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 MYL10Q9BUA6 226 aa6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 MXD3Q9BW11 206 aa6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 ANKRD2Q9GZV1 360 aa6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 RABEP2Q9H5N1 569 aa6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 SUGCTQ9HAC7 445 aa6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 FANCFQ9NPI8 374 aa6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 PIH1D1Q9NWS0 290 aaKnown RBP6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 KCTD5Q9NXV2 234 aa6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 ZNF70Q9UC06 446 aaPredicted RBP6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 ADD3Q9UEY8 706 aaKnown RBP6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 HERC5Q9UII4 1024 aaKnown RBP6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 CTAGE15A4D2H0 777 aa6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 KLHL33A6NCF5 533 aa6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 MT-ND3P03897 115 aa6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 TUBBP07437 444 aa6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 RHOXF2BP0C7M4 288 aa6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 CTAGE8P0CG41 777 aa6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 ADSLP30566 484 aaPredicted RBP6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 GCLCP48506 637 aaPredicted RBP6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 MAN2A2P49641 1150 aa6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 C17orf67Q0P5P2 114 aa6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 SMAD2Q15796 467 aaKnown RBP6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 TAF12Q16514 161 aa6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 HSP90B2PQ58FF3 399 aa6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 FKBP15Q5T1M5 1219 aa6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 LIN54Q6MZP7 749 aa6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 CTAGE6Q86UF2 777 aa6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 CNGA4Q8IV77 575 aa6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 TRIM59Q8IWR1 403 aa6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 CTAGE4Q8IX94 777 aa6.63□□□□□ -1.35
NIPAL3-205ENST00000432012 SLC35F6Q8N357 371 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms