RNA–Protein interactions for RNA: ENST00000431540.7

CDH13-203, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-203ENST00000431540 GTF2BQ00403 316 aa8.97□□□□□ -0.97
CDH13-203ENST00000431540 SPEM2Q0P670 501 aa8.97□□□□□ -0.97
CDH13-203ENST00000431540 GRSF1Q12849 480 aaKnown RBP eCLIP8.97□□□□□ -0.97
CDH13-203ENST00000431540 NFE2Q16621 373 aaPredicted RBP8.97□□□□□ -0.97
CDH13-203ENST00000431540 TMEM196Q5HYL7 178 aa8.97□□□□□ -0.97
CDH13-203ENST00000431540 TSSK4Q6SA08 328 aa8.97□□□□□ -0.97
CDH13-203ENST00000431540 GAREM2Q75VX8 874 aa8.97□□□□□ -0.97
CDH13-203ENST00000431540 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.97□□□□□ -0.97
CDH13-203ENST00000431540 METTL23Q86XA0 190 aa8.97□□□□□ -0.97
CDH13-203ENST00000431540 DCP1BQ8IZD4 617 aaKnown RBP8.97□□□□□ -0.97
CDH13-203ENST00000431540 GAB3Q8WWW8 586 aa8.97□□□□□ -0.97
CDH13-203ENST00000431540 HVCN1Q96D96 273 aa8.97□□□□□ -0.97
CDH13-203ENST00000431540 ZBTB45Q96K62 511 aaPredicted RBP8.97□□□□□ -0.97
CDH13-203ENST00000431540 SENP8Q96LD8 212 aa8.97□□□□□ -0.97
CDH13-203ENST00000431540 CNTNAP3BQ96NU0 1288 aa8.97□□□□□ -0.97
CDH13-203ENST00000431540 GCNAQ96QF7 691 aa8.97□□□□□ -0.97
CDH13-203ENST00000431540 TMEM209Q96SK2 561 aa8.97□□□□□ -0.97
CDH13-203ENST00000431540 FAM83CQ9BQN1 747 aa8.97□□□□□ -0.97
CDH13-203ENST00000431540 MKNK1Q9BUB5 465 aa8.97□□□□□ -0.97
CDH13-203ENST00000431540 RUSC1Q9BVN2 902 aa8.97□□□□□ -0.97
CDH13-203ENST00000431540 CNTNAP3Q9BZ76 1288 aa8.97□□□□□ -0.97
CDH13-203ENST00000431540 DNAJC25Q9H1X3 360 aa8.97□□□□□ -0.97
CDH13-203ENST00000431540 ATXN3LQ9H3M9 355 aa8.97□□□□□ -0.97
CDH13-203ENST00000431540 SLITRK6Q9H5Y7 841 aa8.97□□□□□ -0.97
CDH13-203ENST00000431540 ABCB6Q9NP58 842 aa8.97□□□□□ -0.97
CDH13-203ENST00000431540 UXTQ9UBK9 157 aaPredicted RBP8.97□□□□□ -0.97
CDH13-203ENST00000431540 CPSF3Q9UKF6 684 aaKnown RBP8.97□□□□□ -0.97
CDH13-203ENST00000431540 TBX20Q9UMR3 447 aa8.97□□□□□ -0.97
CDH13-203ENST00000431540 USP20Q9Y2K6 914 aa8.97□□□□□ -0.97
CDH13-203ENST00000431540 MYO16Q9Y6X6 1858 aa8.97□□□□□ -0.97
CDH13-203ENST00000431540 PLXND1Q9Y4D7 1925 aa8.97□□□□□ -0.97
CDH13-203ENST00000431540 TSC2P49815 1807 aa8.96□□□□□ -0.97
CDH13-203ENST00000431540 KIAA1549LQ6ZVL6 1849 aa8.96□□□□□ -0.97
CDH13-203ENST00000431540 HELZP42694 1942 aaKnown RBP8.96□□□□□ -0.97
CDH13-203ENST00000431540 CEP192Q8TEP8 1941 aa8.96□□□□□ -0.97
CDH13-203ENST00000431540 A0A1W2PRU2 124 aa8.96□□□□□ -0.98
CDH13-203ENST00000431540 LACTBL1A8MY62 500 aa8.96□□□□□ -0.98
CDH13-203ENST00000431540 MEFVO15553 781 aaPredicted RBP8.96□□□□□ -0.98
CDH13-203ENST00000431540 EPN2O95208 641 aa8.96□□□□□ -0.98
CDH13-203ENST00000431540 VNN2O95498 520 aa8.96□□□□□ -0.98
CDH13-203ENST00000431540 LDHAP00338 332 aaKnown RBP8.96□□□□□ -0.98
CDH13-203ENST00000431540 FAM163BP0C2L3 166 aa8.96□□□□□ -0.98
CDH13-203ENST00000431540 PLA2G4BP0C869 781 aa8.96□□□□□ -0.98
CDH13-203ENST00000431540 CSH1P0DML2 217 aa8.96□□□□□ -0.98
CDH13-203ENST00000431540 CSH2P0DML3 217 aa8.96□□□□□ -0.98
CDH13-203ENST00000431540 DPP6P42658 865 aa8.96□□□□□ -0.98
CDH13-203ENST00000431540 LIG4P49917 911 aa8.96□□□□□ -0.98
CDH13-203ENST00000431540 PDE6CP51160 858 aa8.96□□□□□ -0.98
CDH13-203ENST00000431540 SATB1Q01826 763 aa8.96□□□□□ -0.98
CDH13-203ENST00000431540 RUNX3Q13761 415 aa8.96□□□□□ -0.98
CDH13-203ENST00000431540 GAS6Q14393 721 aa8.96□□□□□ -0.98
CDH13-203ENST00000431540 KARSQ15046 597 aaKnown RBP8.96□□□□□ -0.98
CDH13-203ENST00000431540 PDGFRLQ15198 375 aa8.96□□□□□ -0.98
CDH13-203ENST00000431540 PPM1JQ5JR12 505 aa8.96□□□□□ -0.98
CDH13-203ENST00000431540 IL31Q6EBC2 164 aa8.96□□□□□ -0.98
CDH13-203ENST00000431540 DPH6Q7L8W6 267 aa8.96□□□□□ -0.98
CDH13-203ENST00000431540 CMTM8Q8IZV2 173 aa8.96□□□□□ -0.98
CDH13-203ENST00000431540 FAM160A2Q8N612 972 aaPredicted RBP8.96□□□□□ -0.98
CDH13-203ENST00000431540 LEO1Q8WVC0 666 aaPredicted RBP8.96□□□□□ -0.98
CDH13-203ENST00000431540 CALML4Q96GE6 196 aa8.96□□□□□ -0.98
CDH13-203ENST00000431540 TRMT2BQ96GJ1 504 aaKnown RBP8.96□□□□□ -0.98
CDH13-203ENST00000431540 CDK5RAP3Q96JB5 506 aa8.96□□□□□ -0.98
CDH13-203ENST00000431540 MYRFLQ96LU7 910 aa8.96□□□□□ -0.98
CDH13-203ENST00000431540 ZCWPW1Q9H0M4 648 aa8.96□□□□□ -0.98
CDH13-203ENST00000431540 PARVGQ9HBI0 331 aa8.96□□□□□ -0.98
CDH13-203ENST00000431540 VPS45Q9NRW7 570 aa8.96□□□□□ -0.98
CDH13-203ENST00000431540 PCDHB6Q9Y5E3 794 aa8.96□□□□□ -0.98
CDH13-203ENST00000431540 COL4A3Q01955 1670 aa8.96□□□□□ -0.98
CDH13-203ENST00000431540 CHD6Q8TD26 2715 aa8.96□□□□□ -0.98
CDH13-203ENST00000431540 PTPRDP23468 1912 aa8.95□□□□□ -0.98
CDH13-203ENST00000431540 ABCA7Q8IZY2 2146 aa8.95□□□□□ -0.98
CDH13-203ENST00000431540 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.95□□□□□ -0.98
CDH13-203ENST00000431540 DCDC2BA2VCK2 349 aa8.95□□□□□ -0.98
CDH13-203ENST00000431540 SFI1A8K8P3 1242 aa8.95□□□□□ -0.98
CDH13-203ENST00000431540 HNRNPDLO14979 420 aaKnown RBP8.95□□□□□ -0.98
CDH13-203ENST00000431540 TRAK2O60296 914 aa8.95□□□□□ -0.98
CDH13-203ENST00000431540 RHOBTB1O94844 696 aa8.95□□□□□ -0.98
CDH13-203ENST00000431540 IL18RAPO95256 599 aa8.95□□□□□ -0.98
CDH13-203ENST00000431540 CXCL8P10145 99 aa8.95□□□□□ -0.98
CDH13-203ENST00000431540 HAPLN1P10915 354 aaPredicted RBP8.95□□□□□ -0.98
CDH13-203ENST00000431540 GABRR2P28476 465 aa8.95□□□□□ -0.98
CDH13-203ENST00000431540 AVPR1AP37288 418 aa8.95□□□□□ -0.98
CDH13-203ENST00000431540 MATR3P43243 847 aaKnown RBP eCLIP8.95□□□□□ -0.98
CDH13-203ENST00000431540 PPP3CCP48454 512 aa8.95□□□□□ -0.98
CDH13-203ENST00000431540 FNTBP49356 437 aa8.95□□□□□ -0.98
CDH13-203ENST00000431540 TAF6P49848 677 aa8.95□□□□□ -0.98
CDH13-203ENST00000431540 RPL10AP62906 217 aaKnown RBP8.95□□□□□ -0.98
CDH13-203ENST00000431540 ST3GAL1Q11201 340 aa8.95□□□□□ -0.98
CDH13-203ENST00000431540 NR1H3Q13133 447 aa8.95□□□□□ -0.98
CDH13-203ENST00000431540 ENOX2Q16206 610 aaKnown RBP8.95□□□□□ -0.98
CDH13-203ENST00000431540 TAF12Q16514 161 aa8.95□□□□□ -0.98
CDH13-203ENST00000431540 IL17AQ16552 155 aa8.95□□□□□ -0.98
CDH13-203ENST00000431540 TMEM119Q4V9L6 283 aa8.95□□□□□ -0.98
CDH13-203ENST00000431540 ARSHQ5FYA8 562 aa8.95□□□□□ -0.98
CDH13-203ENST00000431540 SPDYCQ5MJ68 293 aa8.95□□□□□ -0.98
CDH13-203ENST00000431540 GPR158Q5T848 1215 aa8.95□□□□□ -0.98
CDH13-203ENST00000431540 C9orf57Q5W0N0 161 aa8.95□□□□□ -0.98
CDH13-203ENST00000431540 PRR23BQ6ZRT6 265 aa8.95□□□□□ -0.98
CDH13-203ENST00000431540 CEP68Q76N32 757 aa8.95□□□□□ -0.98
CDH13-203ENST00000431540 SYT13Q7L8C5 426 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms