RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 CCT5P48643 541 aa3.76□□□□□ -1.81
HMGB1P27-201ENST00000431429 CPT1AP50416 773 aa3.76□□□□□ -1.81
HMGB1P27-201ENST00000431429 NHLH2Q02577 135 aa3.76□□□□□ -1.81
HMGB1P27-201ENST00000431429 OCA2Q04671 838 aa3.76□□□□□ -1.81
HMGB1P27-201ENST00000431429 PIGFQ07326 219 aa3.76□□□□□ -1.81
HMGB1P27-201ENST00000431429 ARHGEF7Q14155 803 aa3.76□□□□□ -1.81
HMGB1P27-201ENST00000431429 PKN1Q16512 942 aa3.76□□□□□ -1.81
HMGB1P27-201ENST00000431429 MAPKAPK3Q16644 382 aa3.76□□□□□ -1.81
HMGB1P27-201ENST00000431429 SLC5A9Q2M3M2 681 aa3.76□□□□□ -1.81
HMGB1P27-201ENST00000431429 RRAGBQ5VZM2 374 aa3.76□□□□□ -1.81
HMGB1P27-201ENST00000431429 ARL6IP4Q66PJ3 421 aaKnown RBP3.76□□□□□ -1.81
HMGB1P27-201ENST00000431429 TAF2Q6P1X5 1199 aa3.76□□□□□ -1.81
HMGB1P27-201ENST00000431429 Q6ZRM9 215 aa3.76□□□□□ -1.81
HMGB1P27-201ENST00000431429 LCNL1Q6ZST4 164 aa3.76□□□□□ -1.81
HMGB1P27-201ENST00000431429 SIAH1Q8IUQ4 282 aa3.76□□□□□ -1.81
HMGB1P27-201ENST00000431429 D2HGDHQ8N465 521 aa3.76□□□□□ -1.81
HMGB1P27-201ENST00000431429 PSD4Q8NDX1 1056 aa3.76□□□□□ -1.81
HMGB1P27-201ENST00000431429 IL17REQ8NFR9 667 aa3.76□□□□□ -1.81
HMGB1P27-201ENST00000431429 FEZF2Q8TBJ5 459 aa3.76□□□□□ -1.81
HMGB1P27-201ENST00000431429 Q8TCH9 128 aa3.76□□□□□ -1.81
HMGB1P27-201ENST00000431429 PNISRQ8TF01 805 aaKnown RBP3.76□□□□□ -1.81
HMGB1P27-201ENST00000431429 EDAQ92838 391 aa3.76□□□□□ -1.81
HMGB1P27-201ENST00000431429 GCC1Q96CN9 775 aa3.76□□□□□ -1.81
HMGB1P27-201ENST00000431429 SNX27Q96L92 541 aa3.76□□□□□ -1.81
HMGB1P27-201ENST00000431429 SLC46A1Q96NT5 459 aa3.76□□□□□ -1.81
HMGB1P27-201ENST00000431429 MOGAT1Q96PD6 335 aa3.76□□□□□ -1.81
HMGB1P27-201ENST00000431429 TRIB1Q96RU8 372 aa3.76□□□□□ -1.81
HMGB1P27-201ENST00000431429 PPP1R9BQ96SB3 815 aa3.76□□□□□ -1.81
HMGB1P27-201ENST00000431429 MNTQ99583 582 aa3.76□□□□□ -1.81
HMGB1P27-201ENST00000431429 STK31Q9BXU1 1019 aa3.76□□□□□ -1.81
HMGB1P27-201ENST00000431429 MAGEB5Q9BZ81 275 aa3.76□□□□□ -1.81
HMGB1P27-201ENST00000431429 EPC1Q9H2F5 836 aa3.76□□□□□ -1.81
HMGB1P27-201ENST00000431429 FAM83DQ9H4H8 585 aa3.76□□□□□ -1.81
HMGB1P27-201ENST00000431429 SPON1Q9HCB6 807 aa3.76□□□□□ -1.81
HMGB1P27-201ENST00000431429 CD248Q9HCU0 757 aa3.76□□□□□ -1.81
HMGB1P27-201ENST00000431429 DKK2Q9UBU2 259 aa3.76□□□□□ -1.81
HMGB1P27-201ENST00000431429 VPS51Q9UID3 782 aa3.76□□□□□ -1.81
HMGB1P27-201ENST00000431429 DTNAQ9Y4J8 743 aa3.76□□□□□ -1.81
HMGB1P27-201ENST00000431429 CDY1Q9Y6F8 540 aa3.76□□□□□ -1.81
HMGB1P27-201ENST00000431429 XDHP47989 1333 aa3.75□□□□□ -1.81
HMGB1P27-201ENST00000431429 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.75□□□□□ -1.81
HMGB1P27-201ENST00000431429 LOC100996750A0A140TA64 210 aa3.75□□□□□ -1.81
HMGB1P27-201ENST00000431429 A0A1B0GTW7 788 aa3.75□□□□□ -1.81
HMGB1P27-201ENST00000431429 OTOL1A6NHN0 477 aaPredicted RBP3.75□□□□□ -1.81
HMGB1P27-201ENST00000431429 AQP12BA6NM10 295 aa3.75□□□□□ -1.81
HMGB1P27-201ENST00000431429 DBX1A6NMT0 343 aa3.75□□□□□ -1.81
HMGB1P27-201ENST00000431429 M0R3H8 397 aa3.75□□□□□ -1.81
HMGB1P27-201ENST00000431429 POLRMTO00411 1230 aaKnown RBP3.75□□□□□ -1.81
HMGB1P27-201ENST00000431429 TRIM24O15164 1050 aa3.75□□□□□ -1.81
HMGB1P27-201ENST00000431429 ZNF185O15231 689 aa3.75□□□□□ -1.81
HMGB1P27-201ENST00000431429 RRP9O43818 475 aaKnown RBP3.75□□□□□ -1.81
HMGB1P27-201ENST00000431429 PRICKLE3O43900 615 aaPredicted RBP3.75□□□□□ -1.81
HMGB1P27-201ENST00000431429 SOAT2O75908 522 aa3.75□□□□□ -1.81
HMGB1P27-201ENST00000431429 DHRS4L1P0CG22 281 aa3.75□□□□□ -1.81
HMGB1P27-201ENST00000431429 KCNA2P16389 499 aa3.75□□□□□ -1.81
HMGB1P27-201ENST00000431429 KCNA3P22001 575 aa3.75□□□□□ -1.81
HMGB1P27-201ENST00000431429 FGFR4P22455 802 aa3.75□□□□□ -1.81
HMGB1P27-201ENST00000431429 MST1P26927 711 aa3.75□□□□□ -1.81
HMGB1P27-201ENST00000431429 ANXA11P50995 505 aaKnown RBP3.75□□□□□ -1.81
HMGB1P27-201ENST00000431429 SCNN1GP51170 649 aa3.75□□□□□ -1.81
HMGB1P27-201ENST00000431429 DGKEP52429 567 aa3.75□□□□□ -1.81
HMGB1P27-201ENST00000431429 PNLIPRP1P54315 467 aa3.75□□□□□ -1.81
HMGB1P27-201ENST00000431429 LOXL3P58215 753 aa3.75□□□□□ -1.81
HMGB1P27-201ENST00000431429 PPFIA1Q13136 1202 aa3.75□□□□□ -1.81
HMGB1P27-201ENST00000431429 FHL3Q13643 280 aa3.75□□□□□ -1.81
HMGB1P27-201ENST00000431429 SLC29A2Q14542 456 aa3.75□□□□□ -1.81
HMGB1P27-201ENST00000431429 IQCB1Q15051 598 aa3.75□□□□□ -1.81
HMGB1P27-201ENST00000431429 TRIM71Q2Q1W2 868 aaKnown RBP3.75□□□□□ -1.81
HMGB1P27-201ENST00000431429 PLA1AQ53H76 456 aa3.75□□□□□ -1.81
HMGB1P27-201ENST00000431429 TMTC4Q5T4D3 741 aa3.75□□□□□ -1.81
HMGB1P27-201ENST00000431429 B3GNTL1Q67FW5 361 aaPredicted RBP3.75□□□□□ -1.81
HMGB1P27-201ENST00000431429 RAP1GAP2Q684P5 730 aa3.75□□□□□ -1.81
HMGB1P27-201ENST00000431429 JMJD6Q6NYC1 403 aaPredicted RBP3.75□□□□□ -1.81
HMGB1P27-201ENST00000431429 LVRNQ6Q4G3 990 aa3.75□□□□□ -1.81
HMGB1P27-201ENST00000431429 USP49Q70CQ1 688 aa3.75□□□□□ -1.81
HMGB1P27-201ENST00000431429 CIR1Q86X95 450 aaPredicted RBP3.75□□□□□ -1.81
HMGB1P27-201ENST00000431429 ZNF280BQ86YH2 543 aa3.75□□□□□ -1.81
HMGB1P27-201ENST00000431429 MPP5Q8N3R9 675 aa3.75□□□□□ -1.81
HMGB1P27-201ENST00000431429 ZNF808Q8N4W9 903 aaPredicted RBP3.75□□□□□ -1.81
HMGB1P27-201ENST00000431429 MB21D1Q8N884 522 aa3.75□□□□□ -1.81
HMGB1P27-201ENST00000431429 OR56A1Q8NGH5 318 aa3.75□□□□□ -1.81
HMGB1P27-201ENST00000431429 IPO4Q8TEX9 1081 aaKnown RBP3.75□□□□□ -1.81
HMGB1P27-201ENST00000431429 STYXQ8WUJ0 223 aa3.75□□□□□ -1.81
HMGB1P27-201ENST00000431429 CCT6BQ92526 530 aa3.75□□□□□ -1.81
HMGB1P27-201ENST00000431429 MUL1Q969V5 352 aa3.75□□□□□ -1.81
HMGB1P27-201ENST00000431429 TBC1D20Q96BZ9 403 aa3.75□□□□□ -1.81
HMGB1P27-201ENST00000431429 LRRC46Q96FV0 321 aa3.75□□□□□ -1.81
HMGB1P27-201ENST00000431429 FAM227BQ96M60 508 aa3.75□□□□□ -1.81
HMGB1P27-201ENST00000431429 SMOQ99835 787 aa3.75□□□□□ -1.81
HMGB1P27-201ENST00000431429 KATNAL1Q9BW62 490 aa3.75□□□□□ -1.81
HMGB1P27-201ENST00000431429 SLC46A2Q9BY10 475 aa3.75□□□□□ -1.81
HMGB1P27-201ENST00000431429 KRTAP4-6Q9BYQ5 205 aa3.75□□□□□ -1.81
HMGB1P27-201ENST00000431429 TRIM5Q9C035 493 aa3.75□□□□□ -1.81
HMGB1P27-201ENST00000431429 RNPEPQ9H4A4 650 aa3.75□□□□□ -1.81
HMGB1P27-201ENST00000431429 HEYLQ9NQ87 328 aaPredicted RBP3.75□□□□□ -1.81
HMGB1P27-201ENST00000431429 TMEM74BQ9NUR3 256 aa3.75□□□□□ -1.81
HMGB1P27-201ENST00000431429 DACT1Q9NYF0 836 aa3.75□□□□□ -1.81
HMGB1P27-201ENST00000431429 POGKQ9P215 609 aa3.75□□□□□ -1.81
HMGB1P27-201ENST00000431429 ITGB1BP2Q9UKP3 347 aa3.75□□□□□ -1.81
HMGB1P27-201ENST00000431429 CA14Q9ULX7 337 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms