RNA–Protein interactions for RNA: ENST00000431352.1

SEC13-211, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 832 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-211ENST00000431352 TRIM68Q6AZZ1 485 aa14.97□□□□□ -0.01
SEC13-211ENST00000431352 LAIR1Q6GTX8 287 aa14.97□□□□□ -0.01
SEC13-211ENST00000431352 MAMSTRQ6ZN01 415 aa14.97□□□□□ -0.01
SEC13-211ENST00000431352 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.97□□□□□ -0.01
SEC13-211ENST00000431352 TMEM150AQ86TG1 271 aa14.97□□□□□ -0.01
SEC13-211ENST00000431352 NT5DC4Q86YG4 428 aa14.97□□□□□ -0.01
SEC13-211ENST00000431352 CMTM8Q8IZV2 173 aa14.97□□□□□ -0.01
SEC13-211ENST00000431352 PDCL2Q8N4E4 241 aa14.97□□□□□ -0.01
SEC13-211ENST00000431352 CELF5Q8N6W0 485 aaKnown RBP14.97□□□□□ -0.01
SEC13-211ENST00000431352 C1orf127Q8N9H9 656 aa14.97□□□□□ -0.01
SEC13-211ENST00000431352 CBWD1Q9BRT8 395 aa14.97□□□□□ -0.01
SEC13-211ENST00000431352 EBF3Q9H4W6 596 aa14.97□□□□□ -0.01
SEC13-211ENST00000431352 PCIF1Q9H4Z3 704 aa14.97□□□□□ -0.01
SEC13-211ENST00000431352 TRPC7Q9HCX4 862 aa14.97□□□□□ -0.01
SEC13-211ENST00000431352 DDX43Q9NXZ2 648 aaKnown RBP14.97□□□□□ -0.01
SEC13-211ENST00000431352 L1RE1Q9UN81 338 aa14.97□□□□□ -0.01
SEC13-211ENST00000431352 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.97□□□□□ -0.01
SEC13-211ENST00000431352 DCDC2BA2VCK2 349 aa14.96□□□□□ -0.01
SEC13-211ENST00000431352 K7ESF4 209 aa14.96□□□□□ -0.01
SEC13-211ENST00000431352 HCRTO43612 131 aa14.96□□□□□ -0.01
SEC13-211ENST00000431352 HUS1O60921 280 aa14.96□□□□□ -0.01
SEC13-211ENST00000431352 TGM1P22735 817 aa14.96□□□□□ -0.01
SEC13-211ENST00000431352 ATXN1P54253 815 aaKnown RBP14.96□□□□□ -0.01
SEC13-211ENST00000431352 DDR2Q16832 855 aa14.96□□□□□ -0.01
SEC13-211ENST00000431352 LMBRD2Q68DH5 695 aaPredicted RBP14.96□□□□□ -0.01
SEC13-211ENST00000431352 CCDC73Q6ZRK6 1079 aa14.96□□□□□ -0.01
SEC13-211ENST00000431352 CEP68Q76N32 757 aa14.96□□□□□ -0.01
SEC13-211ENST00000431352 LONP2Q86WA8 852 aa14.96□□□□□ -0.01
SEC13-211ENST00000431352 CSGALNACT2Q8N6G5 542 aa14.96□□□□□ -0.01
SEC13-211ENST00000431352 PDILTQ8N807 584 aa14.96□□□□□ -0.01
SEC13-211ENST00000431352 MRPS31Q92665 395 aaKnown RBP14.96□□□□□ -0.01
SEC13-211ENST00000431352 USP13Q92995 863 aaPredicted RBP14.96□□□□□ -0.01
SEC13-211ENST00000431352 STRA6Q9BX79 667 aa14.96□□□□□ -0.01
SEC13-211ENST00000431352 MTMR12Q9C0I1 747 aa14.96□□□□□ -0.01
SEC13-211ENST00000431352 GKN1Q9NS71 199 aa14.96□□□□□ -0.01
SEC13-211ENST00000431352 PANK4Q9NVE7 773 aa14.96□□□□□ -0.01
SEC13-211ENST00000431352 SNX9Q9Y5X1 595 aa14.96□□□□□ -0.01
SEC13-211ENST00000431352 SPTBN2O15020 2390 aa14.96□□□□□ -0.02
SEC13-211ENST00000431352 KIF26AQ9ULI4 1882 aaPredicted RBP14.95□□□□□ -0.02
SEC13-211ENST00000431352 A0A087X0B3 334 aa14.95□□□□□ -0.02
SEC13-211ENST00000431352 PRR5-ARHGAP8B1AHC4 643 aa14.95□□□□□ -0.02
SEC13-211ENST00000431352 HRO43593 1189 aa14.95□□□□□ -0.02
SEC13-211ENST00000431352 EXTL3O43909 919 aa14.95□□□□□ -0.02
SEC13-211ENST00000431352 PRPF6O94906 941 aaKnown RBP14.95□□□□□ -0.02
SEC13-211ENST00000431352 TMEM191BP0C7N4 346 aa14.95□□□□□ -0.02
SEC13-211ENST00000431352 ARSAP15289 507 aa14.95□□□□□ -0.02
SEC13-211ENST00000431352 HMGA1P17096 107 aaKnown RBP14.95□□□□□ -0.02
SEC13-211ENST00000431352 SYT1P21579 422 aa14.95□□□□□ -0.02
SEC13-211ENST00000431352 CYP2F1P24903 491 aa14.95□□□□□ -0.02
SEC13-211ENST00000431352 PXNP49023 591 aaPredicted RBP14.95□□□□□ -0.02
SEC13-211ENST00000431352 ARHGAP8P85298 464 aa14.95□□□□□ -0.02
SEC13-211ENST00000431352 MYL7Q01449 175 aa14.95□□□□□ -0.02
SEC13-211ENST00000431352 POU5F1Q01860 360 aaKnown RBP14.95□□□□□ -0.02
SEC13-211ENST00000431352 CCINQ13939 588 aa14.95□□□□□ -0.02
SEC13-211ENST00000431352 NFE2Q16621 373 aaPredicted RBP14.95□□□□□ -0.02
SEC13-211ENST00000431352 PKN3Q6P5Z2 889 aa14.95□□□□□ -0.02
SEC13-211ENST00000431352 OSTM1Q86WC4 334 aa14.95□□□□□ -0.02
SEC13-211ENST00000431352 ADGRF2Q8IZF7 708 aa14.95□□□□□ -0.02
SEC13-211ENST00000431352 RIN3Q8TB24 985 aa14.95□□□□□ -0.02
SEC13-211ENST00000431352 CACTINQ8WUQ7 758 aaKnown RBP14.95□□□□□ -0.02
SEC13-211ENST00000431352 USP28Q96RU2 1077 aa14.95□□□□□ -0.02
SEC13-211ENST00000431352 PDE11AQ9HCR9 933 aa14.95□□□□□ -0.02
SEC13-211ENST00000431352 HPS4Q9NQG7 708 aa14.95□□□□□ -0.02
SEC13-211ENST00000431352 OLFML3Q9NRN5 406 aa14.95□□□□□ -0.02
SEC13-211ENST00000431352 GTF3C4Q9UKN8 822 aa14.95□□□□□ -0.02
SEC13-211ENST00000431352 PCDHB13Q9Y5F0 798 aa14.95□□□□□ -0.02
SEC13-211ENST00000431352 OTOL1A6NHN0 477 aaPredicted RBP14.94□□□□□ -0.02
SEC13-211ENST00000431352 F11P03951 625 aa14.94□□□□□ -0.02
SEC13-211ENST00000431352 RETP07949 1114 aa14.94□□□□□ -0.02
SEC13-211ENST00000431352 CSH1P0DML2 217 aa14.94□□□□□ -0.02
SEC13-211ENST00000431352 CSH2P0DML3 217 aa14.94□□□□□ -0.02
SEC13-211ENST00000431352 SDHBP21912 280 aa14.94□□□□□ -0.02
SEC13-211ENST00000431352 GARTP22102 1010 aa14.94□□□□□ -0.02
SEC13-211ENST00000431352 WEE1P30291 646 aa14.94□□□□□ -0.02
SEC13-211ENST00000431352 RUNX3Q13761 415 aa14.94□□□□□ -0.02
SEC13-211ENST00000431352 INTS6LQ5JSJ4 861 aaKnown RBP14.94□□□□□ -0.02
SEC13-211ENST00000431352 CC2D1AQ6P1N0 951 aaPredicted RBP14.94□□□□□ -0.02
SEC13-211ENST00000431352 SPATA2LQ8IUW3 424 aaPredicted RBP14.94□□□□□ -0.02
SEC13-211ENST00000431352 SCN4BQ8IWT1 228 aa14.94□□□□□ -0.02
SEC13-211ENST00000431352 LRRC52Q8N7C0 313 aa14.94□□□□□ -0.02
SEC13-211ENST00000431352 GLIS3Q8NEA6 775 aa14.94□□□□□ -0.02
SEC13-211ENST00000431352 HPS3Q969F9 1004 aa14.94□□□□□ -0.02
SEC13-211ENST00000431352 FAM83CQ9BQN1 747 aa14.94□□□□□ -0.02
SEC13-211ENST00000431352 ITGA11Q9UKX5 1188 aa14.94□□□□□ -0.02
SEC13-211ENST00000431352 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.93□□□□□ -0.02
SEC13-211ENST00000431352 TADA3O75528 432 aa14.93□□□□□ -0.02
SEC13-211ENST00000431352 PAPSS2O95340 614 aaPredicted RBP14.93□□□□□ -0.02
SEC13-211ENST00000431352 LDHAP00338 332 aaKnown RBP14.93□□□□□ -0.02
SEC13-211ENST00000431352 KCNA4P22459 653 aa14.93□□□□□ -0.02
SEC13-211ENST00000431352 DDX6P26196 483 aaKnown RBP eCLIP14.93□□□□□ -0.02
SEC13-211ENST00000431352 PSMC1P62191 440 aaKnown RBP14.93□□□□□ -0.02
SEC13-211ENST00000431352 RPL10AP62906 217 aaKnown RBP14.93□□□□□ -0.02
SEC13-211ENST00000431352 RBP5P82980 135 aa14.93□□□□□ -0.02
SEC13-211ENST00000431352 GRSF1Q12849 480 aaKnown RBP eCLIP14.93□□□□□ -0.02
SEC13-211ENST00000431352 ALCAMQ13740 583 aa14.93□□□□□ -0.02
SEC13-211ENST00000431352 NAIF1Q69YI7 327 aaPredicted RBP14.93□□□□□ -0.02
SEC13-211ENST00000431352 FSTL4Q6MZW2 842 aa14.93□□□□□ -0.02
SEC13-211ENST00000431352 TMEM86AQ8N2M4 240 aa14.93□□□□□ -0.02
SEC13-211ENST00000431352 GPD1LQ8N335 351 aa14.93□□□□□ -0.02
SEC13-211ENST00000431352 LEO1Q8WVC0 666 aaPredicted RBP14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms