RNA–Protein interactions for RNA: ENST00000430559.5

TNFSF13B-202, Transcript of TNF superfamily member 13b, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFSF13B, Length 2,614 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13B-202ENST00000430559 LACTBP83111 547 aaPredicted RBP13.16□□□□□ -0.3
TNFSF13B-202ENST00000430559 SLC25A11Q02978 314 aaKnown RBP13.16□□□□□ -0.3
TNFSF13B-202ENST00000430559 GPS1Q13098 491 aa13.16□□□□□ -0.3
TNFSF13B-202ENST00000430559 MAP1SQ66K74 1059 aaPredicted RBP13.16□□□□□ -0.3
TNFSF13B-202ENST00000430559 TRNP1Q6NT89 227 aa13.16□□□□□ -0.3
TNFSF13B-202ENST00000430559 PLPPR4Q7Z2D5 763 aa13.16□□□□□ -0.3
TNFSF13B-202ENST00000430559 SLC4A11Q8NBS3 891 aa13.16□□□□□ -0.3
TNFSF13B-202ENST00000430559 ELAC2Q9BQ52 826 aaKnown RBP13.16□□□□□ -0.3
TNFSF13B-202ENST00000430559 METTL5Q9NRN9 209 aaKnown RBP13.16□□□□□ -0.3
TNFSF13B-202ENST00000430559 CITO14578 2027 aa13.16□□□□□ -0.3
TNFSF13B-202ENST00000430559 B4GALT4O60513 344 aa13.16□□□□□ -0.3
TNFSF13B-202ENST00000430559 CALB1P05937 261 aa13.16□□□□□ -0.3
TNFSF13B-202ENST00000430559 STAG3L1P0CL83 205 aa13.16□□□□□ -0.3
TNFSF13B-202ENST00000430559 MAN1A1P33908 653 aa13.16□□□□□ -0.3
TNFSF13B-202ENST00000430559 ARHGAP1Q07960 439 aa13.16□□□□□ -0.3
TNFSF13B-202ENST00000430559 OASLQ15646 514 aaKnown RBP13.16□□□□□ -0.3
TNFSF13B-202ENST00000430559 SYCP2LQ5T4T6 812 aa13.16□□□□□ -0.3
TNFSF13B-202ENST00000430559 ANKRD22Q5VYY1 191 aa13.16□□□□□ -0.3
TNFSF13B-202ENST00000430559 MAMDC4Q6UXC1 1216 aa13.16□□□□□ -0.3
TNFSF13B-202ENST00000430559 CCDC13Q8IYE1 715 aa13.16□□□□□ -0.3
TNFSF13B-202ENST00000430559 CACNA2D3Q8IZS8 1091 aa13.16□□□□□ -0.3
TNFSF13B-202ENST00000430559 C3orf20Q8ND61 904 aa13.16□□□□□ -0.3
TNFSF13B-202ENST00000430559 UBA3Q8TBC4 463 aa13.16□□□□□ -0.3
TNFSF13B-202ENST00000430559 GRK7Q8WTQ7 553 aa13.16□□□□□ -0.3
TNFSF13B-202ENST00000430559 LRRN4Q8WUT4 740 aa13.16□□□□□ -0.3
TNFSF13B-202ENST00000430559 TCP11Q8WWU5 503 aa13.16□□□□□ -0.3
TNFSF13B-202ENST00000430559 SAYSD1Q9NPB0 183 aa13.16□□□□□ -0.3
TNFSF13B-202ENST00000430559 NAALADL1Q9UQQ1 740 aa13.16□□□□□ -0.3
TNFSF13B-202ENST00000430559 VIMP08670 466 aaKnown RBP13.15□□□□□ -0.3
TNFSF13B-202ENST00000430559 PSMA2P25787 234 aa13.15□□□□□ -0.3
TNFSF13B-202ENST00000430559 CDH5P33151 784 aaPredicted RBP13.15□□□□□ -0.3
TNFSF13B-202ENST00000430559 ARMCX2Q7L311 632 aa13.15□□□□□ -0.3
TNFSF13B-202ENST00000430559 SRRM1Q8IYB3 904 aaKnown RBP13.15□□□□□ -0.3
TNFSF13B-202ENST00000430559 ALLCQ8N6M5 410 aa13.15□□□□□ -0.3
TNFSF13B-202ENST00000430559 CENPTQ96BT3 561 aa13.15□□□□□ -0.3
TNFSF13B-202ENST00000430559 LPIN3Q9BQK8 851 aa13.15□□□□□ -0.3
TNFSF13B-202ENST00000430559 TSPYL1Q9H0U9 437 aa13.15□□□□□ -0.3
TNFSF13B-202ENST00000430559 KCNK9Q9NPC2 374 aa13.15□□□□□ -0.3
TNFSF13B-202ENST00000430559 PCDHGC3Q9UN70 934 aa13.15□□□□□ -0.3
TNFSF13B-202ENST00000430559 DOCK3Q8IZD9 2030 aa13.15□□□□□ -0.3
TNFSF13B-202ENST00000430559 PLXNA1Q9UIW2 1896 aa13.15□□□□□ -0.3
TNFSF13B-202ENST00000430559 TCRBV7S3A2A0A539 114 aa13.15□□□□□ -0.3
TNFSF13B-202ENST00000430559 ASAP2O43150 1006 aa13.15□□□□□ -0.3
TNFSF13B-202ENST00000430559 GRAP2O75791 330 aa13.15□□□□□ -0.3
TNFSF13B-202ENST00000430559 TNNC2P02585 160 aa13.15□□□□□ -0.3
TNFSF13B-202ENST00000430559 ARF4P18085 180 aaPredicted RBP13.15□□□□□ -0.3
TNFSF13B-202ENST00000430559 MAGEA4P43358 317 aa13.15□□□□□ -0.3
TNFSF13B-202ENST00000430559 PSMC1P62191 440 aaKnown RBP13.15□□□□□ -0.3
TNFSF13B-202ENST00000430559 GRM1Q13255 1194 aa13.15□□□□□ -0.3
TNFSF13B-202ENST00000430559 SLC10A6Q3KNW5 377 aa13.15□□□□□ -0.3
TNFSF13B-202ENST00000430559 GKAP1Q5VSY0 366 aaPredicted RBP13.15□□□□□ -0.3
TNFSF13B-202ENST00000430559 XYLT1Q86Y38 959 aa13.15□□□□□ -0.3
TNFSF13B-202ENST00000430559 ANKRD13AQ8IZ07 590 aa13.15□□□□□ -0.3
TNFSF13B-202ENST00000430559 RCOR2Q8IZ40 523 aa13.15□□□□□ -0.3
TNFSF13B-202ENST00000430559 CCDC89Q8N998 374 aa13.15□□□□□ -0.3
TNFSF13B-202ENST00000430559 C12orf29Q8N999 325 aa13.15□□□□□ -0.3
TNFSF13B-202ENST00000430559 MAIP1Q8WWC4 291 aa13.15□□□□□ -0.3
TNFSF13B-202ENST00000430559 ANKRD36BP1Q96IX9 119 aa13.15□□□□□ -0.3
TNFSF13B-202ENST00000430559 PEBP4Q96S96 227 aa13.15□□□□□ -0.3
TNFSF13B-202ENST00000430559 WDR83Q9BRX9 315 aaKnown RBP13.15□□□□□ -0.3
TNFSF13B-202ENST00000430559 PDZD7Q9H5P4 517 aa13.15□□□□□ -0.3
TNFSF13B-202ENST00000430559 RPF1Q9H9Y2 349 aaKnown RBP13.15□□□□□ -0.3
TNFSF13B-202ENST00000430559 FGFR1OP2Q9NVK5 253 aa13.15□□□□□ -0.3
TNFSF13B-202ENST00000430559 EURLQ9NYK6 297 aa13.15□□□□□ -0.3
TNFSF13B-202ENST00000430559 KCNH4Q9UQ05 1017 aa13.15□□□□□ -0.3
TNFSF13B-202ENST00000430559 PPEF2O14830 753 aa13.14□□□□□ -0.31
TNFSF13B-202ENST00000430559 HCRTO43612 131 aa13.14□□□□□ -0.31
TNFSF13B-202ENST00000430559 FSBPO95073 299 aa13.14□□□□□ -0.31
TNFSF13B-202ENST00000430559 LSM8O95777 96 aaKnown RBP13.14□□□□□ -0.31
TNFSF13B-202ENST00000430559 LGALS2P05162 132 aa13.14□□□□□ -0.31
TNFSF13B-202ENST00000430559 KRT3P12035 628 aa13.14□□□□□ -0.31
TNFSF13B-202ENST00000430559 EIF4BP23588 611 aaKnown RBP13.14□□□□□ -0.31
TNFSF13B-202ENST00000430559 POLR2BP30876 1174 aaKnown RBP13.14□□□□□ -0.31
TNFSF13B-202ENST00000430559 ADCYAP1R1P41586 468 aa13.14□□□□□ -0.31
TNFSF13B-202ENST00000430559 PLCB3Q01970 1234 aa13.14□□□□□ -0.31
TNFSF13B-202ENST00000430559 TMEM62Q0P6H9 643 aa13.14□□□□□ -0.31
TNFSF13B-202ENST00000430559 MMRN1Q13201 1228 aa13.14□□□□□ -0.31
TNFSF13B-202ENST00000430559 EFTUD2Q15029 972 aaKnown RBP eCLIP13.14□□□□□ -0.31
TNFSF13B-202ENST00000430559 ZKSCAN8Q15776 578 aaPredicted RBP13.14□□□□□ -0.31
TNFSF13B-202ENST00000430559 MSS51Q4VC12 460 aa13.14□□□□□ -0.31
TNFSF13B-202ENST00000430559 ANKRD20A8PQ5CZ79 823 aa13.14□□□□□ -0.31
TNFSF13B-202ENST00000430559 SYDE1Q6ZW31 735 aaPredicted RBP13.14□□□□□ -0.31
TNFSF13B-202ENST00000430559 TAX1BP1Q86VP1 789 aa13.14□□□□□ -0.31
TNFSF13B-202ENST00000430559 ACTL9Q8TC94 416 aa13.14□□□□□ -0.31
TNFSF13B-202ENST00000430559 AFG1LQ8WV93 481 aa13.14□□□□□ -0.31
TNFSF13B-202ENST00000430559 BCO2Q9BYV7 579 aa13.14□□□□□ -0.31
TNFSF13B-202ENST00000430559 ATXN2Q99700 1313 aaKnown RBP13.14□□□□□ -0.31
TNFSF13B-202ENST00000430559 TCP11X1B4DZS4 312 aa13.14□□□□□ -0.31
TNFSF13B-202ENST00000430559 DNALI1O14645 258 aaPredicted RBP13.14□□□□□ -0.31
TNFSF13B-202ENST00000430559 MICAL2O94851 1124 aa13.14□□□□□ -0.31
TNFSF13B-202ENST00000430559 OTUD4Q01804 1114 aaKnown RBP13.14□□□□□ -0.31
TNFSF13B-202ENST00000430559 ACTN3Q08043 901 aaPredicted RBP13.14□□□□□ -0.31
TNFSF13B-202ENST00000430559 TMED2Q15363 201 aa13.14□□□□□ -0.31
TNFSF13B-202ENST00000430559 TFDP3Q5H9I0 405 aa13.14□□□□□ -0.31
TNFSF13B-202ENST00000430559 ZNF667Q5HYK9 610 aa13.14□□□□□ -0.31
TNFSF13B-202ENST00000430559 TAPT1Q6NXT6 567 aa13.14□□□□□ -0.31
TNFSF13B-202ENST00000430559 NPNTQ6UXI9 565 aa13.14□□□□□ -0.31
TNFSF13B-202ENST00000430559 YTHDF3Q7Z739 585 aaKnown RBP13.14□□□□□ -0.31
TNFSF13B-202ENST00000430559 PIGWQ7Z7B1 504 aa13.14□□□□□ -0.31
TNFSF13B-202ENST00000430559 ANKMY2Q8IV38 441 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms