RNA–Protein interactions for RNA: ENST00000430548.5

AC004540.1-202, humanhuman

TSL 4

Gene AC004540.1, Length 576 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-202ENST00000430548 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.07■□□□□ 0.8
AC004540.1-202ENST00000430548 MORC2Q9Y6X9 1032 aaPredicted RBP20.07■□□□□ 0.8
AC004540.1-202ENST00000430548 MYMKA6NI61 221 aa20.06■□□□□ 0.8
AC004540.1-202ENST00000430548 TADA3O75528 432 aa20.06■□□□□ 0.8
AC004540.1-202ENST00000430548 CDR1P51861 262 aa20.06■□□□□ 0.8
AC004540.1-202ENST00000430548 CASP5P51878 434 aa20.06■□□□□ 0.8
AC004540.1-202ENST00000430548 SRSF5Q13243 272 aaKnown RBP20.06■□□□□ 0.8
AC004540.1-202ENST00000430548 TMEM196Q5HYL7 178 aa20.06■□□□□ 0.8
AC004540.1-202ENST00000430548 PDCL2Q8N4E4 241 aa20.06■□□□□ 0.8
AC004540.1-202ENST00000430548 LRRC52Q8N7C0 313 aa20.06■□□□□ 0.8
AC004540.1-202ENST00000430548 ZSWIM2Q8NEG5 633 aa20.06■□□□□ 0.8
AC004540.1-202ENST00000430548 SPATA18Q8TC71 538 aa20.06■□□□□ 0.8
AC004540.1-202ENST00000430548 NETO1Q8TDF5 533 aa20.06■□□□□ 0.8
AC004540.1-202ENST00000430548 USP13Q92995 863 aaPredicted RBP20.06■□□□□ 0.8
AC004540.1-202ENST00000430548 MRPL44Q9H9J2 332 aaKnown RBP20.06■□□□□ 0.8
AC004540.1-202ENST00000430548 UPF2Q9HAU5 1272 aaKnown RBP20.06■□□□□ 0.8
AC004540.1-202ENST00000430548 ABCB6Q9NP58 842 aa20.06■□□□□ 0.8
AC004540.1-202ENST00000430548 SEMA4GQ9NTN9 838 aa20.06■□□□□ 0.8
AC004540.1-202ENST00000430548 THG1LQ9NWX6 298 aaKnown RBP20.06■□□□□ 0.8
AC004540.1-202ENST00000430548 CCDC39Q9UFE4 941 aa20.06■□□□□ 0.8
AC004540.1-202ENST00000430548 L1RE1Q9UN81 338 aa20.06■□□□□ 0.8
AC004540.1-202ENST00000430548 EXOC7Q9UPT5 735 aa20.06■□□□□ 0.8
AC004540.1-202ENST00000430548 CCL26Q9Y258 94 aa20.06■□□□□ 0.8
AC004540.1-202ENST00000430548 CACNA1BQ00975 2339 aa20.05■□□□□ 0.8
AC004540.1-202ENST00000430548 ITGB3P05106 788 aa20.05■□□□□ 0.8
AC004540.1-202ENST00000430548 CSH1P0DML2 217 aa20.05■□□□□ 0.8
AC004540.1-202ENST00000430548 CSH2P0DML3 217 aa20.05■□□□□ 0.8
AC004540.1-202ENST00000430548 GARTP22102 1010 aa20.05■□□□□ 0.8
AC004540.1-202ENST00000430548 POLR2BP30876 1174 aaKnown RBP20.05■□□□□ 0.8
AC004540.1-202ENST00000430548 TSPY1Q01534 308 aa20.05■□□□□ 0.8
AC004540.1-202ENST00000430548 ZNF268Q14587 947 aaPredicted RBP20.05■□□□□ 0.8
AC004540.1-202ENST00000430548 CSRP2Q16527 193 aa20.05■□□□□ 0.8
AC004540.1-202ENST00000430548 NFE2Q16621 373 aaPredicted RBP20.05■□□□□ 0.8
AC004540.1-202ENST00000430548 PKN3Q6P5Z2 889 aa20.05■□□□□ 0.8
AC004540.1-202ENST00000430548 PRR23CQ6ZRP0 262 aa20.05■□□□□ 0.8
AC004540.1-202ENST00000430548 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.05■□□□□ 0.8
AC004540.1-202ENST00000430548 TRMT2BQ96GJ1 504 aaKnown RBP20.05■□□□□ 0.8
AC004540.1-202ENST00000430548 ACCSQ96QU6 501 aa20.05■□□□□ 0.8
AC004540.1-202ENST00000430548 ACBD6Q9BR61 282 aa20.05■□□□□ 0.8
AC004540.1-202ENST00000430548 FAM213AQ9BRX8 229 aa20.05■□□□□ 0.8
AC004540.1-202ENST00000430548 CCDC163A0A0D9SF12 145 aa20.04■□□□□ 0.8
AC004540.1-202ENST00000430548 VPS37CA5D8V6 355 aaPredicted RBP20.04■□□□□ 0.8
AC004540.1-202ENST00000430548 OTOL1A6NHN0 477 aaPredicted RBP20.04■□□□□ 0.8
AC004540.1-202ENST00000430548 SLC30A4O14863 429 aa20.04■□□□□ 0.8
AC004540.1-202ENST00000430548 NOL4O94818 638 aa20.04■□□□□ 0.8
AC004540.1-202ENST00000430548 HOXC13P31276 330 aa20.04■□□□□ 0.8
AC004540.1-202ENST00000430548 AVPR1AP37288 418 aa20.04■□□□□ 0.8
AC004540.1-202ENST00000430548 GPR15P49685 360 aa20.04■□□□□ 0.8
AC004540.1-202ENST00000430548 RESTQ13127 1097 aa20.04■□□□□ 0.8
AC004540.1-202ENST00000430548 ALCAMQ13740 583 aa20.04■□□□□ 0.8
AC004540.1-202ENST00000430548 RUNX3Q13761 415 aa20.04■□□□□ 0.8
AC004540.1-202ENST00000430548 TAF12Q16514 161 aa20.04■□□□□ 0.8
AC004540.1-202ENST00000430548 INTS6LQ5JSJ4 861 aaKnown RBP20.04■□□□□ 0.8
AC004540.1-202ENST00000430548 FSTL4Q6MZW2 842 aa20.04■□□□□ 0.8
AC004540.1-202ENST00000430548 TMEM86AQ8N2M4 240 aa20.04■□□□□ 0.8
AC004540.1-202ENST00000430548 MAB21L3Q8N8X9 362 aa20.04■□□□□ 0.8
AC004540.1-202ENST00000430548 STKLD1Q8NE28 680 aa20.04■□□□□ 0.8
AC004540.1-202ENST00000430548 SAAL1Q96ER3 474 aa20.04■□□□□ 0.8
AC004540.1-202ENST00000430548 MYRFLQ96LU7 910 aa20.04■□□□□ 0.8
AC004540.1-202ENST00000430548 FGFBP2Q9BYJ0 223 aa20.04■□□□□ 0.8
AC004540.1-202ENST00000430548 GKN1Q9NS71 199 aa20.04■□□□□ 0.8
AC004540.1-202ENST00000430548 TDP1Q9NUW8 608 aa20.04■□□□□ 0.8
AC004540.1-202ENST00000430548 GDAP2Q9NXN4 497 aa20.04■□□□□ 0.8
AC004540.1-202ENST00000430548 RBAKQ9NYW8 714 aaPredicted RBP20.04■□□□□ 0.8
AC004540.1-202ENST00000430548 ITGA11Q9UKX5 1188 aa20.04■□□□□ 0.8
AC004540.1-202ENST00000430548 TRDMT1O14717 391 aaKnown RBP20.03■□□□□ 0.8
AC004540.1-202ENST00000430548 GCNT3O95395 438 aa20.03■□□□□ 0.8
AC004540.1-202ENST00000430548 LDHAP00338 332 aaKnown RBP20.03■□□□□ 0.8
AC004540.1-202ENST00000430548 TFAMQ00059 246 aaKnown RBP20.03■□□□□ 0.8
AC004540.1-202ENST00000430548 CFAP221Q4G0U5 840 aa20.03■□□□□ 0.8
AC004540.1-202ENST00000430548 RRAGBQ5VZM2 374 aa20.03■□□□□ 0.8
AC004540.1-202ENST00000430548 HEATR6Q6AI08 1181 aaKnown RBP20.03■□□□□ 0.8
AC004540.1-202ENST00000430548 SV2BQ7L1I2 683 aa20.03■□□□□ 0.8
AC004540.1-202ENST00000430548 MON1AQ86VX9 555 aa20.03■□□□□ 0.8
AC004540.1-202ENST00000430548 FAM160A2Q8N612 972 aaPredicted RBP20.03■□□□□ 0.8
AC004540.1-202ENST00000430548 PI4K2AQ9BTU6 479 aa20.03■□□□□ 0.8
AC004540.1-202ENST00000430548 DDX43Q9NXZ2 648 aaKnown RBP20.03■□□□□ 0.8
AC004540.1-202ENST00000430548 AGAP1Q9UPQ3 857 aa20.03■□□□□ 0.8
AC004540.1-202ENST00000430548 DCDC2BA2VCK2 349 aa20.02■□□□□ 0.8
AC004540.1-202ENST00000430548 GABRDO14764 452 aa20.02■□□□□ 0.8
AC004540.1-202ENST00000430548 EXTL3O43909 919 aa20.02■□□□□ 0.8
AC004540.1-202ENST00000430548 FOXD2O60548 495 aaPredicted RBP20.02■□□□□ 0.8
AC004540.1-202ENST00000430548 PRPF40AO75400 957 aaKnown RBP20.02■□□□□ 0.8
AC004540.1-202ENST00000430548 PDCP20941 246 aa20.02■□□□□ 0.8
AC004540.1-202ENST00000430548 TXLNAP40222 546 aa20.02■□□□□ 0.8
AC004540.1-202ENST00000430548 BFSP1Q12934 665 aa20.02■□□□□ 0.8
AC004540.1-202ENST00000430548 USP4Q13107 963 aa20.02■□□□□ 0.8
AC004540.1-202ENST00000430548 TXNDC8Q6A555 127 aa20.02■□□□□ 0.8
AC004540.1-202ENST00000430548 SCARA3Q6AZY7 606 aa20.02■□□□□ 0.8
AC004540.1-202ENST00000430548 TRIM68Q6AZZ1 485 aa20.02■□□□□ 0.8
AC004540.1-202ENST00000430548 OSTM1Q86WC4 334 aa20.02■□□□□ 0.8
AC004540.1-202ENST00000430548 MRPS31Q92665 395 aaKnown RBP20.02■□□□□ 0.8
AC004540.1-202ENST00000430548 CLIC6Q96NY7 704 aa20.02■□□□□ 0.8
AC004540.1-202ENST00000430548 CBWD1Q9BRT8 395 aa20.02■□□□□ 0.8
AC004540.1-202ENST00000430548 EBF3Q9H4W6 596 aa20.02■□□□□ 0.8
AC004540.1-202ENST00000430548 TBC1D7Q9P0N9 293 aa20.02■□□□□ 0.8
AC004540.1-202ENST00000430548 UXTQ9UBK9 157 aaPredicted RBP20.02■□□□□ 0.8
AC004540.1-202ENST00000430548 SIX4Q9UIU6 781 aa20.02■□□□□ 0.8
AC004540.1-202ENST00000430548 PCDHB13Q9Y5F0 798 aa20.02■□□□□ 0.8
AC004540.1-202ENST00000430548 NUP205Q92621 2012 aa20.02■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms