RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 OTOL1A6NHN0 477 aaPredicted RBP12.67□□□□□ -0.38
HDAC4-202ENST00000430200 GABRDO14764 452 aa12.67□□□□□ -0.38
HDAC4-202ENST00000430200 CLIC2O15247 247 aa12.67□□□□□ -0.38
HDAC4-202ENST00000430200 EIF3DO15371 548 aaKnown RBP eCLIP12.67□□□□□ -0.38
HDAC4-202ENST00000430200 ACTN4O43707 911 aaKnown RBP12.67□□□□□ -0.38
HDAC4-202ENST00000430200 KLRC4O43908 158 aa12.67□□□□□ -0.38
HDAC4-202ENST00000430200 F11P03951 625 aa12.67□□□□□ -0.38
HDAC4-202ENST00000430200 KRT19P08727 400 aa12.67□□□□□ -0.38
HDAC4-202ENST00000430200 CYP2F1P24903 491 aa12.67□□□□□ -0.38
HDAC4-202ENST00000430200 DDR2Q16832 855 aa12.67□□□□□ -0.38
HDAC4-202ENST00000430200 NAIF1Q69YI7 327 aaPredicted RBP12.67□□□□□ -0.38
HDAC4-202ENST00000430200 ADGRF2Q8IZF7 708 aa12.67□□□□□ -0.38
HDAC4-202ENST00000430200 DCLK2Q8N568 766 aa12.67□□□□□ -0.38
HDAC4-202ENST00000430200 CSGALNACT2Q8N6G5 542 aa12.67□□□□□ -0.38
HDAC4-202ENST00000430200 KIAA0895Q8NCT3 520 aa12.67□□□□□ -0.38
HDAC4-202ENST00000430200 ZNF507Q8TCN5 953 aa12.67□□□□□ -0.38
HDAC4-202ENST00000430200 SPPL2BQ8TCT7 592 aa12.67□□□□□ -0.38
HDAC4-202ENST00000430200 LEO1Q8WVC0 666 aaPredicted RBP12.67□□□□□ -0.38
HDAC4-202ENST00000430200 SLC22A12Q96S37 553 aa12.67□□□□□ -0.38
HDAC4-202ENST00000430200 C7orf25Q9BPX7 421 aa12.67□□□□□ -0.38
HDAC4-202ENST00000430200 SLC46A2Q9BY10 475 aa12.67□□□□□ -0.38
HDAC4-202ENST00000430200 BCO2Q9BYV7 579 aa12.67□□□□□ -0.38
HDAC4-202ENST00000430200 CHRDQ9H2X0 955 aa12.67□□□□□ -0.38
HDAC4-202ENST00000430200 CRTAC1Q9NQ79 661 aa12.67□□□□□ -0.38
HDAC4-202ENST00000430200 TRPV5Q9NQA5 729 aa12.67□□□□□ -0.38
HDAC4-202ENST00000430200 GDAP2Q9NXN4 497 aa12.67□□□□□ -0.38
HDAC4-202ENST00000430200 GTF3C4Q9UKN8 822 aa12.67□□□□□ -0.38
HDAC4-202ENST00000430200 ASB3Q9Y575 518 aa12.67□□□□□ -0.38
HDAC4-202ENST00000430200 SNX9Q9Y5X1 595 aa12.67□□□□□ -0.38
HDAC4-202ENST00000430200 MYBPHLA2RUH7 354 aa12.66□□□□□ -0.38
HDAC4-202ENST00000430200 TMEM191BP0C7N4 346 aa12.66□□□□□ -0.38
HDAC4-202ENST00000430200 CHRNB1P11230 501 aa12.66□□□□□ -0.38
HDAC4-202ENST00000430200 PAX3P23760 479 aa12.66□□□□□ -0.38
HDAC4-202ENST00000430200 CCNE1P24864 410 aa12.66□□□□□ -0.38
HDAC4-202ENST00000430200 LMO2P25791 158 aa12.66□□□□□ -0.38
HDAC4-202ENST00000430200 PNPLA4P41247 253 aa12.66□□□□□ -0.38
HDAC4-202ENST00000430200 RPS9P46781 194 aaKnown RBP12.66□□□□□ -0.38
HDAC4-202ENST00000430200 CASP4P49662 377 aa12.66□□□□□ -0.38
HDAC4-202ENST00000430200 CYP2J2P51589 502 aa12.66□□□□□ -0.38
HDAC4-202ENST00000430200 CACNA2D1P54289 1103 aa12.66□□□□□ -0.38
HDAC4-202ENST00000430200 NLRP12P59046 1061 aa12.66□□□□□ -0.38
HDAC4-202ENST00000430200 CSTF1Q05048 431 aaKnown RBP12.66□□□□□ -0.38
HDAC4-202ENST00000430200 DMWDQ09019 674 aa12.66□□□□□ -0.38
HDAC4-202ENST00000430200 SNRNP35Q16560 246 aaKnown RBP12.66□□□□□ -0.38
HDAC4-202ENST00000430200 PKN3Q6P5Z2 889 aa12.66□□□□□ -0.38
HDAC4-202ENST00000430200 ZNF852Q6ZMS4 543 aa12.66□□□□□ -0.38
HDAC4-202ENST00000430200 UNC13DQ70J99 1090 aa12.66□□□□□ -0.38
HDAC4-202ENST00000430200 METTL23Q86XA0 190 aa12.66□□□□□ -0.38
HDAC4-202ENST00000430200 HSCBQ8IWL3 235 aa12.66□□□□□ -0.38
HDAC4-202ENST00000430200 FAM200AQ8TCP9 573 aa12.66□□□□□ -0.38
HDAC4-202ENST00000430200 ZNF516Q92618 1163 aa12.66□□□□□ -0.38
HDAC4-202ENST00000430200 IRF7Q92985 503 aa12.66□□□□□ -0.38
HDAC4-202ENST00000430200 ZNF396Q96N95 335 aaPredicted RBP12.66□□□□□ -0.38
HDAC4-202ENST00000430200 CUEDC2Q9H467 287 aa12.66□□□□□ -0.38
HDAC4-202ENST00000430200 TMEM206Q9H813 350 aa12.66□□□□□ -0.38
HDAC4-202ENST00000430200 HPS4Q9NQG7 708 aa12.66□□□□□ -0.38
HDAC4-202ENST00000430200 PCDHB5Q9Y5E4 795 aa12.66□□□□□ -0.38
HDAC4-202ENST00000430200 SPECC1L-ADORA2AF8WAN1 911 aa12.65□□□□□ -0.38
HDAC4-202ENST00000430200 ZNF263O14978 683 aa12.65□□□□□ -0.38
HDAC4-202ENST00000430200 CHADO15335 359 aa12.65□□□□□ -0.38
HDAC4-202ENST00000430200 LAMTOR5O43504 91 aa12.65□□□□□ -0.38
HDAC4-202ENST00000430200 LDHAP00338 332 aaKnown RBP12.65□□□□□ -0.38
HDAC4-202ENST00000430200 LMNAP02545 664 aaKnown RBP12.65□□□□□ -0.38
HDAC4-202ENST00000430200 CTHP32929 405 aa12.65□□□□□ -0.38
HDAC4-202ENST00000430200 AFMP43652 599 aa12.65□□□□□ -0.38
HDAC4-202ENST00000430200 SATB1Q01826 763 aa12.65□□□□□ -0.38
HDAC4-202ENST00000430200 CYP24A1Q07973 514 aa12.65□□□□□ -0.38
HDAC4-202ENST00000430200 BMT2Q1RMZ1 405 aa12.65□□□□□ -0.38
HDAC4-202ENST00000430200 TXNDC8Q6A555 127 aa12.65□□□□□ -0.38
HDAC4-202ENST00000430200 TRIM68Q6AZZ1 485 aa12.65□□□□□ -0.38
HDAC4-202ENST00000430200 ITIH5Q86UX2 942 aa12.65□□□□□ -0.38
HDAC4-202ENST00000430200 TOP6BLQ8N6T0 577 aa12.65□□□□□ -0.38
HDAC4-202ENST00000430200 IQUBQ8NA54 791 aa12.65□□□□□ -0.38
HDAC4-202ENST00000430200 RDH13Q8NBN7 331 aa12.65□□□□□ -0.38
HDAC4-202ENST00000430200 ZBTB44Q8NCP5 570 aa12.65□□□□□ -0.38
HDAC4-202ENST00000430200 C2orf15Q8WU43 125 aaKnown RBP12.65□□□□□ -0.38
HDAC4-202ENST00000430200 FAM3CQ92520 227 aa12.65□□□□□ -0.38
HDAC4-202ENST00000430200 USP13Q92995 863 aaPredicted RBP12.65□□□□□ -0.38
HDAC4-202ENST00000430200 MYLPFQ96A32 169 aa12.65□□□□□ -0.38
HDAC4-202ENST00000430200 MRPL45Q9BRJ2 306 aaKnown RBP12.65□□□□□ -0.38
HDAC4-202ENST00000430200 DPEP3Q9H4B8 488 aa12.65□□□□□ -0.38
HDAC4-202ENST00000430200 TASP1Q9H6P5 420 aa12.65□□□□□ -0.38
HDAC4-202ENST00000430200 SLC39A2Q9NP94 309 aa12.65□□□□□ -0.38
HDAC4-202ENST00000430200 SERTAD1Q9UHV2 236 aa12.65□□□□□ -0.38
HDAC4-202ENST00000430200 FBXO4Q9UKT5 387 aa12.65□□□□□ -0.38
HDAC4-202ENST00000430200 TNRC6BQ9UPQ9 1833 aaKnown RBP12.65□□□□□ -0.39
HDAC4-202ENST00000430200 UBE4BO95155 1302 aa12.64□□□□□ -0.39
HDAC4-202ENST00000430200 NCOR2Q9Y618 2525 aa12.64□□□□□ -0.39
HDAC4-202ENST00000430200 HUS1O60921 280 aa12.64□□□□□ -0.39
HDAC4-202ENST00000430200 LILRB5O75023 590 aa12.64□□□□□ -0.39
HDAC4-202ENST00000430200 PRPF40AO75400 957 aaKnown RBP12.64□□□□□ -0.39
HDAC4-202ENST00000430200 NOL4O94818 638 aa12.64□□□□□ -0.39
HDAC4-202ENST00000430200 CST3P01034 146 aaPredicted RBP12.64□□□□□ -0.39
HDAC4-202ENST00000430200 PRR29P0C7W0 189 aa12.64□□□□□ -0.39
HDAC4-202ENST00000430200 ME1P48163 572 aa12.64□□□□□ -0.39
HDAC4-202ENST00000430200 TUFMP49411 452 aaKnown RBP12.64□□□□□ -0.39
HDAC4-202ENST00000430200 USP46P62068 366 aa12.64□□□□□ -0.39
HDAC4-202ENST00000430200 RBP5P82980 135 aa12.64□□□□□ -0.39
HDAC4-202ENST00000430200 TSPY1Q01534 308 aa12.64□□□□□ -0.39
HDAC4-202ENST00000430200 VEPH1Q14D04 833 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms