RNA–Protein interactions for RNA: ENST00000429940.6

LINC00839-202, long intergenic non-protein coding RNA 839, humanhuman

TSL 2 BASIC

Gene LINC00839, Length 2,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00839-202ENST00000429940 PCDH9Q9HC56 1237 aa15.8■□□□□ 0.12
LINC00839-202ENST00000429940 SSU72Q9NP77 194 aaKnown RBP15.8■□□□□ 0.12
LINC00839-202ENST00000429940 XPNPEP1Q9NQW7 623 aa15.8■□□□□ 0.12
LINC00839-202ENST00000429940 ARHGAP28Q9P2N2 729 aa15.8■□□□□ 0.12
LINC00839-202ENST00000429940 SEPT9Q9UHD8 586 aaPredicted RBP15.8■□□□□ 0.12
LINC00839-202ENST00000429940 AGO2Q9UKV8 859 aaKnown RBP15.8■□□□□ 0.12
LINC00839-202ENST00000429940 hCG_1818297A0A087WSY0 165 aa15.8■□□□□ 0.12
LINC00839-202ENST00000429940 WDR91A4D1P6 747 aa15.8■□□□□ 0.12
LINC00839-202ENST00000429940 F8VP50 259 aa15.8■□□□□ 0.12
LINC00839-202ENST00000429940 H0Y3Z8 333 aa15.8■□□□□ 0.12
LINC00839-202ENST00000429940 TROVE2P10155 538 aaKnown RBP eCLIP15.8■□□□□ 0.12
LINC00839-202ENST00000429940 MMP8P22894 467 aa15.8■□□□□ 0.12
LINC00839-202ENST00000429940 ADRA1DP25100 572 aa15.8■□□□□ 0.12
LINC00839-202ENST00000429940 PTPN4P29074 926 aa15.8■□□□□ 0.12
LINC00839-202ENST00000429940 PHBP35232 272 aa15.8■□□□□ 0.12
LINC00839-202ENST00000429940 RTP1P59025 263 aa15.8■□□□□ 0.12
LINC00839-202ENST00000429940 EFTUD2Q15029 972 aaKnown RBP eCLIP15.8■□□□□ 0.12
LINC00839-202ENST00000429940 TFDP3Q5H9I0 405 aa15.8■□□□□ 0.12
LINC00839-202ENST00000429940 LRRC38Q5VT99 294 aa15.8■□□□□ 0.12
LINC00839-202ENST00000429940 TTC8Q8TAM2 541 aa15.8■□□□□ 0.12
LINC00839-202ENST00000429940 NKD2Q969F2 451 aaPredicted RBP15.8■□□□□ 0.12
LINC00839-202ENST00000429940 TEPSINQ96N21 525 aa15.8■□□□□ 0.12
LINC00839-202ENST00000429940 DENND2DQ9H6A0 471 aaPredicted RBP15.8■□□□□ 0.12
LINC00839-202ENST00000429940 SLC38A10Q9HBR0 1119 aa15.8■□□□□ 0.12
LINC00839-202ENST00000429940 RBAKQ9NYW8 714 aaPredicted RBP15.8■□□□□ 0.12
LINC00839-202ENST00000429940 RABGEF1Q9UJ41 708 aa15.8■□□□□ 0.12
LINC00839-202ENST00000429940 LRRD1A4D1F6 860 aa15.79■□□□□ 0.12
LINC00839-202ENST00000429940 EIF4E1BA6NMX2 242 aaKnown RBP15.79■□□□□ 0.12
LINC00839-202ENST00000429940 H0YCG3 227 aa15.79■□□□□ 0.12
LINC00839-202ENST00000429940 WDR46O15213 610 aaKnown RBP15.79■□□□□ 0.12
LINC00839-202ENST00000429940 ENTPD5O75356 428 aa15.79■□□□□ 0.12
LINC00839-202ENST00000429940 STBD1O95210 358 aa15.79■□□□□ 0.12
LINC00839-202ENST00000429940 GLRA2P23416 452 aa15.79■□□□□ 0.12
LINC00839-202ENST00000429940 TBXAS1P24557 533 aaPredicted RBP15.79■□□□□ 0.12
LINC00839-202ENST00000429940 CCNHP51946 323 aaPredicted RBP15.79■□□□□ 0.12
LINC00839-202ENST00000429940 TFDP1Q14186 410 aa15.79■□□□□ 0.12
LINC00839-202ENST00000429940 CDCA2Q69YH5 1023 aaPredicted RBP15.79■□□□□ 0.12
LINC00839-202ENST00000429940 TXNRD3NBQ6F5E7 133 aa15.79■□□□□ 0.12
LINC00839-202ENST00000429940 SWSAP1Q6NVH7 229 aa15.79■□□□□ 0.12
LINC00839-202ENST00000429940 CLNKQ7Z7G1 428 aa15.79■□□□□ 0.12
LINC00839-202ENST00000429940 ZNF398Q8TD17 642 aa15.79■□□□□ 0.12
LINC00839-202ENST00000429940 PDLIM7Q9NR12 457 aa15.79■□□□□ 0.12
LINC00839-202ENST00000429940 SAR1AQ9NR31 198 aa15.79■□□□□ 0.12
LINC00839-202ENST00000429940 GGA3Q9NZ52 723 aa15.79■□□□□ 0.12
LINC00839-202ENST00000429940 ANKFY1Q9P2R3 1169 aa15.79■□□□□ 0.12
LINC00839-202ENST00000429940 LNPEPQ9UIQ6 1025 aa15.79■□□□□ 0.12
LINC00839-202ENST00000429940 CNTN6Q9UQ52 1028 aa15.79■□□□□ 0.12
LINC00839-202ENST00000429940 NUB1Q9Y5A7 615 aa15.79■□□□□ 0.12
LINC00839-202ENST00000429940 CLUHO75153 1309 aa15.79■□□□□ 0.12
LINC00839-202ENST00000429940 HNRNPCL1O60812 293 aaKnown RBP15.79■□□□□ 0.12
LINC00839-202ENST00000429940 MARK3P27448 753 aa15.79■□□□□ 0.12
LINC00839-202ENST00000429940 SSTR1P30872 391 aa15.79■□□□□ 0.12
LINC00839-202ENST00000429940 PTPN7P35236 360 aa15.79■□□□□ 0.12
LINC00839-202ENST00000429940 PCK1P35558 622 aa15.79■□□□□ 0.12
LINC00839-202ENST00000429940 NBPF12Q5TAG4 269 aaPredicted RBP15.79■□□□□ 0.12
LINC00839-202ENST00000429940 DNAJC24Q6P3W2 148 aa15.79■□□□□ 0.12
LINC00839-202ENST00000429940 DCUN1D2Q6PH85 259 aa15.79■□□□□ 0.12
LINC00839-202ENST00000429940 EP400NLQ6ZTU2 488 aa15.79■□□□□ 0.12
LINC00839-202ENST00000429940 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.79■□□□□ 0.12
LINC00839-202ENST00000429940 ASAP3Q8TDY4 903 aa15.79■□□□□ 0.12
LINC00839-202ENST00000429940 PYROXD1Q8WU10 500 aa15.79■□□□□ 0.12
LINC00839-202ENST00000429940 ZNF606Q8WXB4 792 aa15.79■□□□□ 0.12
LINC00839-202ENST00000429940 TLE6Q9H808 572 aa15.79■□□□□ 0.12
LINC00839-202ENST00000429940 ZFATQ9P243 1243 aa15.79■□□□□ 0.12
LINC00839-202ENST00000429940 DCTN4Q9UJW0 460 aa15.79■□□□□ 0.12
LINC00839-202ENST00000429940 A6NHS1 94 aa15.78■□□□□ 0.12
LINC00839-202ENST00000429940 DKC1O60832 514 aaKnown RBP eCLIP15.78■□□□□ 0.12
LINC00839-202ENST00000429940 ZBED4O75132 1171 aa15.78■□□□□ 0.12
LINC00839-202ENST00000429940 CALB1P05937 261 aa15.78■□□□□ 0.12
LINC00839-202ENST00000429940 CDKN2BP42772 138 aa15.78■□□□□ 0.12
LINC00839-202ENST00000429940 PTDSS1P48651 473 aaKnown RBP15.78■□□□□ 0.12
LINC00839-202ENST00000429940 OGDHQ02218 1023 aa15.78■□□□□ 0.12
LINC00839-202ENST00000429940 GAD2Q05329 585 aa15.78■□□□□ 0.12
LINC00839-202ENST00000429940 OVGP1Q12889 678 aa15.78■□□□□ 0.12
LINC00839-202ENST00000429940 DGKZQ13574 1117 aa15.78■□□□□ 0.12
LINC00839-202ENST00000429940 PLEKHG4Q58EX7 1191 aa15.78■□□□□ 0.12
LINC00839-202ENST00000429940 PCGF5Q86SE9 256 aa15.78■□□□□ 0.12
LINC00839-202ENST00000429940 FAM83AQ86UY5 434 aa15.78■□□□□ 0.12
LINC00839-202ENST00000429940 ATP11CQ8NB49 1132 aa15.78■□□□□ 0.12
LINC00839-202ENST00000429940 SH3TC2Q8TF17 1288 aa15.78■□□□□ 0.12
LINC00839-202ENST00000429940 CYP26B1Q9NR63 512 aa15.78■□□□□ 0.12
LINC00839-202ENST00000429940 DDX56Q9NY93 547 aaKnown RBP15.78■□□□□ 0.12
LINC00839-202ENST00000429940 FETUBQ9UGM5 382 aa15.78■□□□□ 0.12
LINC00839-202ENST00000429940 RPL26L1Q9UNX3 145 aaKnown RBP15.78■□□□□ 0.12
LINC00839-202ENST00000429940 FARP1Q9Y4F1 1045 aaPredicted RBP15.78■□□□□ 0.12
LINC00839-202ENST00000429940 CTDP1Q9Y5B0 961 aaPredicted RBP15.78■□□□□ 0.12
LINC00839-202ENST00000429940 NUMBLQ9Y6R0 609 aa15.78■□□□□ 0.12
LINC00839-202ENST00000429940 WDR81Q562E7 1941 aa15.78■□□□□ 0.12
LINC00839-202ENST00000429940 PIAS1O75925 651 aa15.78■□□□□ 0.12
LINC00839-202ENST00000429940 ATP6V1C1P21283 382 aa15.78■□□□□ 0.12
LINC00839-202ENST00000429940 ABCD1P33897 745 aa15.78■□□□□ 0.12
LINC00839-202ENST00000429940 CTCFP49711 727 aaPredicted RBP15.78■□□□□ 0.12
LINC00839-202ENST00000429940 ARL4CP56559 192 aa15.78■□□□□ 0.12
LINC00839-202ENST00000429940 SP4Q02446 784 aa15.78■□□□□ 0.12
LINC00839-202ENST00000429940 GRIK3Q13003 919 aa15.78■□□□□ 0.12
LINC00839-202ENST00000429940 CTC1Q2NKJ3 1217 aa15.78■□□□□ 0.12
LINC00839-202ENST00000429940 FKBP1CQ5VVH2 108 aa15.78■□□□□ 0.12
LINC00839-202ENST00000429940 ARMC2Q8NEN0 867 aa15.78■□□□□ 0.12
LINC00839-202ENST00000429940 RFWD2Q8NHY2 731 aa15.78■□□□□ 0.12
LINC00839-202ENST00000429940 TCP10LQ8TDR4 215 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms