RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 FPGSQ05932 587 aa13.58□□□□□ -0.24
PTCH1-207ENST00000429896 BRD3Q15059 726 aa13.58□□□□□ -0.24
PTCH1-207ENST00000429896 MCEEQ96PE7 176 aa13.58□□□□□ -0.24
PTCH1-207ENST00000429896 MRPL46Q9H2W6 279 aaKnown RBP13.58□□□□□ -0.24
PTCH1-207ENST00000429896 RNF14Q9UBS8 474 aa13.58□□□□□ -0.24
PTCH1-207ENST00000429896 BARX2Q9UMQ3 279 aaPredicted RBP13.58□□□□□ -0.24
PTCH1-207ENST00000429896 PAX3P23760 479 aa13.58□□□□□ -0.24
PTCH1-207ENST00000429896 SLC1A1P43005 524 aa13.58□□□□□ -0.24
PTCH1-207ENST00000429896 TPI1P60174 286 aa13.58□□□□□ -0.24
PTCH1-207ENST00000429896 TLE2Q04725 743 aa13.58□□□□□ -0.24
PTCH1-207ENST00000429896 ARID5BQ14865 1188 aa13.58□□□□□ -0.24
PTCH1-207ENST00000429896 EPC2Q52LR7 807 aa13.58□□□□□ -0.24
PTCH1-207ENST00000429896 PPM1LQ5SGD2 360 aa13.58□□□□□ -0.24
PTCH1-207ENST00000429896 CDC26Q8NHZ8 85 aa13.58□□□□□ -0.24
PTCH1-207ENST00000429896 A0A1W2PQ45 241 aaPredicted RBP13.58□□□□□ -0.24
PTCH1-207ENST00000429896 A0A1W2PQY0 241 aa13.58□□□□□ -0.24
PTCH1-207ENST00000429896 CNMDO75829 334 aa13.58□□□□□ -0.24
PTCH1-207ENST00000429896 MAP3K7CLP57077 242 aa13.58□□□□□ -0.24
PTCH1-207ENST00000429896 OTOP2Q7RTS6 562 aa13.58□□□□□ -0.24
PTCH1-207ENST00000429896 DNAAF3Q8N9W5 541 aa13.58□□□□□ -0.24
PTCH1-207ENST00000429896 C1orf131Q8NDD1 294 aaKnown RBP13.58□□□□□ -0.24
PTCH1-207ENST00000429896 PPP4R1Q8TF05 950 aa13.58□□□□□ -0.24
PTCH1-207ENST00000429896 SYN2Q92777 582 aaPredicted RBP13.58□□□□□ -0.24
PTCH1-207ENST00000429896 UBE2OQ9C0C9 1292 aaKnown RBP13.58□□□□□ -0.24
PTCH1-207ENST00000429896 UVRAGQ9P2Y5 699 aa13.58□□□□□ -0.24
PTCH1-207ENST00000429896 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.58□□□□□ -0.24
PTCH1-207ENST00000429896 RASSF10A6NK89 507 aa13.58□□□□□ -0.24
PTCH1-207ENST00000429896 DNM1LO00429 736 aa13.58□□□□□ -0.24
PTCH1-207ENST00000429896 MBL2P11226 248 aaPredicted RBP13.58□□□□□ -0.24
PTCH1-207ENST00000429896 ARL2P36404 184 aa13.58□□□□□ -0.24
PTCH1-207ENST00000429896 FAM237AA0A1B0GTK4 181 aa13.57□□□□□ -0.24
PTCH1-207ENST00000429896 RGS16O15492 202 aaPredicted RBP13.57□□□□□ -0.24
PTCH1-207ENST00000429896 PMS1P54277 932 aaKnown RBP13.57□□□□□ -0.24
PTCH1-207ENST00000429896 SLC18A3Q16572 532 aa13.57□□□□□ -0.24
PTCH1-207ENST00000429896 ANKRD20A3Q5VUR7 823 aa13.57□□□□□ -0.24
PTCH1-207ENST00000429896 MBOAT7Q96N66 472 aa13.57□□□□□ -0.24
PTCH1-207ENST00000429896 N4BP2Q86UW6 1770 aaPredicted RBP13.57□□□□□ -0.24
PTCH1-207ENST00000429896 MYL4P12829 197 aa13.57□□□□□ -0.24
PTCH1-207ENST00000429896 C1QTNF8P60827 252 aa13.57□□□□□ -0.24
PTCH1-207ENST00000429896 MTMR3Q13615 1198 aa13.57□□□□□ -0.24
PTCH1-207ENST00000429896 DCAF6Q58WW2 860 aa13.57□□□□□ -0.24
PTCH1-207ENST00000429896 P3H4Q92791 437 aa13.57□□□□□ -0.24
PTCH1-207ENST00000429896 RNF25Q96BH1 459 aaPredicted RBP13.57□□□□□ -0.24
PTCH1-207ENST00000429896 CCDC68Q9H2F9 335 aa13.57□□□□□ -0.24
PTCH1-207ENST00000429896 SSU72P8A0A1W2PR75 194 aa13.57□□□□□ -0.24
PTCH1-207ENST00000429896 GRAP2O75791 330 aa13.57□□□□□ -0.24
PTCH1-207ENST00000429896 FBXO21O94952 628 aa13.57□□□□□ -0.24
PTCH1-207ENST00000429896 ITGBL1O95965 494 aaPredicted RBP13.57□□□□□ -0.24
PTCH1-207ENST00000429896 ZFXP17010 805 aaPredicted RBP13.57□□□□□ -0.24
PTCH1-207ENST00000429896 ARF4P18085 180 aaPredicted RBP13.57□□□□□ -0.24
PTCH1-207ENST00000429896 LAG3P18627 525 aa13.57□□□□□ -0.24
PTCH1-207ENST00000429896 MX2P20592 715 aa13.57□□□□□ -0.24
PTCH1-207ENST00000429896 KCNA1Q09470 495 aa13.57□□□□□ -0.24
PTCH1-207ENST00000429896 SLC35G1Q2M3R5 365 aa13.57□□□□□ -0.24
PTCH1-207ENST00000429896 SPDL1Q96EA4 605 aa13.57□□□□□ -0.24
PTCH1-207ENST00000429896 CABS1Q96KC9 395 aa13.57□□□□□ -0.24
PTCH1-207ENST00000429896 HEY1Q9Y5J3 304 aa13.57□□□□□ -0.24
PTCH1-207ENST00000429896 BCORQ6W2J9 1755 aa13.57□□□□□ -0.24
PTCH1-207ENST00000429896 SMIM24O75264 130 aa13.57□□□□□ -0.24
PTCH1-207ENST00000429896 RPL9P32969 192 aaKnown RBP13.57□□□□□ -0.24
PTCH1-207ENST00000429896 CASP5P51878 434 aa13.57□□□□□ -0.24
PTCH1-207ENST00000429896 ST8SIA6P61647 398 aa13.57□□□□□ -0.24
PTCH1-207ENST00000429896 RBM43Q6ZSC3 357 aaKnown RBP13.57□□□□□ -0.24
PTCH1-207ENST00000429896 PDZD8Q8NEN9 1154 aa13.57□□□□□ -0.24
PTCH1-207ENST00000429896 WNT8AQ9H1J5 351 aa13.57□□□□□ -0.24
PTCH1-207ENST00000429896 MAPK13O15264 365 aa13.57□□□□□ -0.24
PTCH1-207ENST00000429896 GPD1P21695 349 aa13.57□□□□□ -0.24
PTCH1-207ENST00000429896 CXCR5P32302 372 aa13.57□□□□□ -0.24
PTCH1-207ENST00000429896 BASP1P80723 227 aaKnown RBP13.57□□□□□ -0.24
PTCH1-207ENST00000429896 PURAQ00577 322 aaKnown RBP13.57□□□□□ -0.24
PTCH1-207ENST00000429896 LMNTD2Q8IXW0 634 aa13.57□□□□□ -0.24
PTCH1-207ENST00000429896 WHAMMQ8TF30 809 aa13.57□□□□□ -0.24
PTCH1-207ENST00000429896 ATP2A3Q93084 1043 aa13.57□□□□□ -0.24
PTCH1-207ENST00000429896 PAWRQ96IZ0 340 aaKnown RBP13.57□□□□□ -0.24
PTCH1-207ENST00000429896 DHX33Q9H6R0 707 aaKnown RBP13.57□□□□□ -0.24
PTCH1-207ENST00000429896 SLC28A3Q9HAS3 691 aa13.57□□□□□ -0.24
PTCH1-207ENST00000429896 RNF19AQ9NV58 838 aa13.57□□□□□ -0.24
PTCH1-207ENST00000429896 NOC2LQ9Y3T9 749 aaKnown RBP13.57□□□□□ -0.24
PTCH1-207ENST00000429896 C22orf31O95567 290 aa13.56□□□□□ -0.24
PTCH1-207ENST00000429896 CDH6P55285 790 aa13.56□□□□□ -0.24
PTCH1-207ENST00000429896 SP2Q02086 613 aa13.56□□□□□ -0.24
PTCH1-207ENST00000429896 B4GALNT4Q76KP1 1039 aa13.56□□□□□ -0.24
PTCH1-207ENST00000429896 RNF10Q8N5U6 811 aaKnown RBP13.56□□□□□ -0.24
PTCH1-207ENST00000429896 ACAT1P24752 427 aaKnown RBP13.56□□□□□ -0.24
PTCH1-207ENST00000429896 BST2Q10589 180 aaKnown RBP13.56□□□□□ -0.24
PTCH1-207ENST00000429896 SENP8Q96LD8 212 aa13.56□□□□□ -0.24
PTCH1-207ENST00000429896 HEMGNQ9BXL5 484 aa13.56□□□□□ -0.24
PTCH1-207ENST00000429896 METTL5Q9NRN9 209 aaKnown RBP13.56□□□□□ -0.24
PTCH1-207ENST00000429896 KLHL8Q9P2G9 620 aaPredicted RBP13.56□□□□□ -0.24
PTCH1-207ENST00000429896 GTPBP10A4D1E9 387 aaKnown RBP13.56□□□□□ -0.24
PTCH1-207ENST00000429896 DFFAO00273 331 aa13.56□□□□□ -0.24
PTCH1-207ENST00000429896 NFICP08651 508 aa13.56□□□□□ -0.24
PTCH1-207ENST00000429896 MDM2Q00987 491 aaPredicted RBP13.56□□□□□ -0.24
PTCH1-207ENST00000429896 RAD51Q06609 339 aa13.56□□□□□ -0.24
PTCH1-207ENST00000429896 SLC39A12Q504Y0 691 aa13.56□□□□□ -0.24
PTCH1-207ENST00000429896 PSRC1Q6PGN9 363 aaPredicted RBP13.56□□□□□ -0.24
PTCH1-207ENST00000429896 DCLRE1AQ6PJP8 1040 aa13.56□□□□□ -0.24
PTCH1-207ENST00000429896 DDX53Q86TM3 631 aaKnown RBP13.56□□□□□ -0.24
PTCH1-207ENST00000429896 G3BP2Q9UN86 482 aaKnown RBP13.56□□□□□ -0.24
PTCH1-207ENST00000429896 OPHN1O60890 802 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms