RNA–Protein interactions for RNA: ENST00000429746.1

CTSD-203, Transcript of cathepsin D, humanhuman

TSL 3

Gene CTSD, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-203ENST00000429746 UBALD2Q8IYN6 164 aa18.64■□□□□ 0.57
CTSD-203ENST00000429746 HS6ST3Q8IZP7 471 aa18.64■□□□□ 0.57
CTSD-203ENST00000429746 TCEAL4Q96EI5 215 aa18.64■□□□□ 0.57
CTSD-203ENST00000429746 BCO2Q9BYV7 579 aa18.64■□□□□ 0.57
CTSD-203ENST00000429746 TMEM30AQ9NV96 361 aa18.64■□□□□ 0.57
CTSD-203ENST00000429746 HMGXB4Q9UGU5 601 aa18.64■□□□□ 0.57
CTSD-203ENST00000429746 GTF3C4Q9UKN8 822 aa18.64■□□□□ 0.57
CTSD-203ENST00000429746 PHACTR2O75167 634 aa18.63■□□□□ 0.57
CTSD-203ENST00000429746 LRG1P02750 347 aa18.63■□□□□ 0.57
CTSD-203ENST00000429746 KRT13P13646 458 aa18.63■□□□□ 0.57
CTSD-203ENST00000429746 ELF1P32519 619 aa18.63■□□□□ 0.57
CTSD-203ENST00000429746 GPR15P49685 360 aa18.63■□□□□ 0.57
CTSD-203ENST00000429746 PSMC1P62191 440 aaKnown RBP18.63■□□□□ 0.57
CTSD-203ENST00000429746 MYL7Q01449 175 aa18.63■□□□□ 0.57
CTSD-203ENST00000429746 SGSM1Q2NKQ1 1148 aa18.63■□□□□ 0.57
CTSD-203ENST00000429746 PABPC1LQ4VXU2 614 aaKnown RBP18.63■□□□□ 0.57
CTSD-203ENST00000429746 KRT39Q6A163 491 aa18.63■□□□□ 0.57
CTSD-203ENST00000429746 FRMD5Q7Z6J6 570 aa18.63■□□□□ 0.57
CTSD-203ENST00000429746 NPAS3Q8IXF0 933 aa18.63■□□□□ 0.57
CTSD-203ENST00000429746 TDRD5Q8NAT2 981 aaKnown RBP18.63■□□□□ 0.57
CTSD-203ENST00000429746 SPPL2BQ8TCT7 592 aa18.63■□□□□ 0.57
CTSD-203ENST00000429746 C2orf15Q8WU43 125 aaKnown RBP18.63■□□□□ 0.57
CTSD-203ENST00000429746 TAF4BQ92750 862 aa18.63■□□□□ 0.57
CTSD-203ENST00000429746 PBXIP1Q96AQ6 731 aa18.63■□□□□ 0.57
CTSD-203ENST00000429746 ACSF2Q96CM8 615 aaPredicted RBP18.63■□□□□ 0.57
CTSD-203ENST00000429746 MMS19Q96T76 1030 aa18.63■□□□□ 0.57
CTSD-203ENST00000429746 PRRX2Q99811 253 aa18.63■□□□□ 0.57
CTSD-203ENST00000429746 SYT15Q9BQS2 421 aa18.63■□□□□ 0.57
CTSD-203ENST00000429746 SMOC2Q9H3U7 446 aa18.63■□□□□ 0.57
CTSD-203ENST00000429746 PIDD1Q9HB75 910 aa18.63■□□□□ 0.57
CTSD-203ENST00000429746 ZNF334Q9HCZ1 680 aaPredicted RBP18.63■□□□□ 0.57
CTSD-203ENST00000429746 NXF1Q9UBU9 619 aaKnown RBP18.63■□□□□ 0.57
CTSD-203ENST00000429746 RWDD2AQ9UIY3 292 aa18.63■□□□□ 0.57
CTSD-203ENST00000429746 SORCS3Q9UPU3 1222 aa18.63■□□□□ 0.57
CTSD-203ENST00000429746 ASGR2P07307 311 aa18.62■□□□□ 0.57
CTSD-203ENST00000429746 LAMP2P13473 410 aa18.62■□□□□ 0.57
CTSD-203ENST00000429746 CEBPBP17676 345 aa18.62■□□□□ 0.57
CTSD-203ENST00000429746 FSHRP23945 695 aa18.62■□□□□ 0.57
CTSD-203ENST00000429746 SMARCB1Q12824 385 aa18.62■□□□□ 0.57
CTSD-203ENST00000429746 CFAP221Q4G0U5 840 aa18.62■□□□□ 0.57
CTSD-203ENST00000429746 ZNF667Q5HYK9 610 aa18.62■□□□□ 0.57
CTSD-203ENST00000429746 GET4Q7L5D6 327 aaPredicted RBP18.62■□□□□ 0.57
CTSD-203ENST00000429746 OTOP3Q7RTS5 596 aa18.62■□□□□ 0.57
CTSD-203ENST00000429746 TRIM59Q8IWR1 403 aa18.62■□□□□ 0.57
CTSD-203ENST00000429746 DCP1BQ8IZD4 617 aaKnown RBP18.62■□□□□ 0.57
CTSD-203ENST00000429746 FGF13Q92913 245 aa18.62■□□□□ 0.57
CTSD-203ENST00000429746 IL21Q9HBE4 155 aa18.62■□□□□ 0.57
CTSD-203ENST00000429746 ABCB6Q9NP58 842 aa18.62■□□□□ 0.57
CTSD-203ENST00000429746 ARMCX3Q9UH62 379 aaPredicted RBP18.62■□□□□ 0.57
CTSD-203ENST00000429746 CDH9Q9ULB4 789 aa18.62■□□□□ 0.57
CTSD-203ENST00000429746 BICDL2A1A5D9 508 aa18.61■□□□□ 0.57
CTSD-203ENST00000429746 ANHXE9PGG2 379 aa18.61■□□□□ 0.57
CTSD-203ENST00000429746 PDGFRBP09619 1106 aa18.61■□□□□ 0.57
CTSD-203ENST00000429746 HMGA1P17096 107 aaKnown RBP18.61■□□□□ 0.57
CTSD-203ENST00000429746 PTPN2P17706 415 aa18.61■□□□□ 0.57
CTSD-203ENST00000429746 CYP2F1P24903 491 aa18.61■□□□□ 0.57
CTSD-203ENST00000429746 PCSK1P29120 753 aa18.61■□□□□ 0.57
CTSD-203ENST00000429746 PIK3CAP42336 1068 aa18.61■□□□□ 0.57
CTSD-203ENST00000429746 MXI1P50539 228 aa18.61■□□□□ 0.57
CTSD-203ENST00000429746 CACNA2D1P54289 1103 aa18.61■□□□□ 0.57
CTSD-203ENST00000429746 TNNC1P63316 161 aa18.61■□□□□ 0.57
CTSD-203ENST00000429746 NOP14P78316 857 aaKnown RBP18.61■□□□□ 0.57
CTSD-203ENST00000429746 TSPY1Q01534 308 aa18.61■□□□□ 0.57
CTSD-203ENST00000429746 MTMR3Q13615 1198 aa18.61■□□□□ 0.57
CTSD-203ENST00000429746 SCARA5Q6ZMJ2 495 aa18.61■□□□□ 0.57
CTSD-203ENST00000429746 PAQR9Q6ZVX9 377 aa18.61■□□□□ 0.57
CTSD-203ENST00000429746 SUGP1Q8IWZ8 645 aaKnown RBP18.61■□□□□ 0.57
CTSD-203ENST00000429746 MLKLQ8NB16 471 aa18.61■□□□□ 0.57
CTSD-203ENST00000429746 STKLD1Q8NE28 680 aa18.61■□□□□ 0.57
CTSD-203ENST00000429746 LMO3Q8TAP4 145 aa18.61■□□□□ 0.57
CTSD-203ENST00000429746 WHAMMQ8TF30 809 aa18.61■□□□□ 0.57
CTSD-203ENST00000429746 PSMG2Q969U7 264 aa18.61■□□□□ 0.57
CTSD-203ENST00000429746 MYLPFQ96A32 169 aa18.61■□□□□ 0.57
CTSD-203ENST00000429746 PCED1BQ96HM7 432 aa18.61■□□□□ 0.57
CTSD-203ENST00000429746 TWNKQ96RR1 684 aa18.61■□□□□ 0.57
CTSD-203ENST00000429746 CORO1BQ9BR76 489 aa18.61■□□□□ 0.57
CTSD-203ENST00000429746 MMRN2Q9H8L6 949 aa18.61■□□□□ 0.57
CTSD-203ENST00000429746 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.61■□□□□ 0.57
CTSD-203ENST00000429746 ABI2Q9NYB9 513 aaPredicted RBP18.61■□□□□ 0.57
CTSD-203ENST00000429746 LIMD1Q9UGP4 676 aa18.61■□□□□ 0.57
CTSD-203ENST00000429746 PCDHB5Q9Y5E4 795 aa18.61■□□□□ 0.57
CTSD-203ENST00000429746 ZNF638Q14966 1978 aaKnown RBP18.61■□□□□ 0.57
CTSD-203ENST00000429746 ANAPC1Q9H1A4 1944 aa18.61■□□□□ 0.57
CTSD-203ENST00000429746 PATJQ8NI35 1801 aa18.6■□□□□ 0.57
CTSD-203ENST00000429746 CACNA1HO95180 2353 aa18.6■□□□□ 0.57
CTSD-203ENST00000429746 NCANO14594 1321 aa18.6■□□□□ 0.57
CTSD-203ENST00000429746 PMM2O15305 246 aa18.6■□□□□ 0.57
CTSD-203ENST00000429746 GNL1P36915 607 aaPredicted RBP18.6■□□□□ 0.57
CTSD-203ENST00000429746 NLRP12P59046 1061 aa18.6■□□□□ 0.57
CTSD-203ENST00000429746 INCA1Q0VD86 236 aa18.6■□□□□ 0.57
CTSD-203ENST00000429746 HTR4Q13639 388 aa18.6■□□□□ 0.57
CTSD-203ENST00000429746 NFE2Q16621 373 aaPredicted RBP18.6■□□□□ 0.57
CTSD-203ENST00000429746 GAREM2Q75VX8 874 aa18.6■□□□□ 0.57
CTSD-203ENST00000429746 TMEM150AQ86TG1 271 aa18.6■□□□□ 0.57
CTSD-203ENST00000429746 FBXL6Q8N531 539 aa18.6■□□□□ 0.57
CTSD-203ENST00000429746 FBXL13Q8NEE6 735 aa18.6■□□□□ 0.57
CTSD-203ENST00000429746 SHKBP1Q8TBC3 707 aa18.6■□□□□ 0.57
CTSD-203ENST00000429746 MYCBPAPQ8TBZ2 947 aa18.6■□□□□ 0.57
CTSD-203ENST00000429746 RSAD2Q8WXG1 361 aa18.6■□□□□ 0.57
CTSD-203ENST00000429746 ASIC4Q96FT7 647 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms