RNA–Protein interactions for RNA: ENST00000429205.6

SENP3-202, Transcript of SUMO specific peptidase 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SENP3, Length 2,222 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-202ENST00000429205 CAPN6Q9Y6Q1 641 aa14.22□□□□□ -0.13
SENP3-202ENST00000429205 H3BRB1 525 aa14.21□□□□□ -0.13
SENP3-202ENST00000429205 KIAA0391O15091 583 aaKnown RBP14.21□□□□□ -0.13
SENP3-202ENST00000429205 ZMYND10O75800 440 aa14.21□□□□□ -0.13
SENP3-202ENST00000429205 MTA2O94776 668 aa14.21□□□□□ -0.13
SENP3-202ENST00000429205 PRKCBP05771 671 aa14.21□□□□□ -0.13
SENP3-202ENST00000429205 MMP3P08254 477 aa14.21□□□□□ -0.13
SENP3-202ENST00000429205 CPA3P15088 417 aa14.21□□□□□ -0.13
SENP3-202ENST00000429205 POLR2EP19388 210 aaKnown RBP14.21□□□□□ -0.13
SENP3-202ENST00000429205 KLRC1P26715 233 aa14.21□□□□□ -0.13
SENP3-202ENST00000429205 GTF2H1P32780 548 aa14.21□□□□□ -0.13
SENP3-202ENST00000429205 PSMD6Q15008 389 aa14.21□□□□□ -0.13
SENP3-202ENST00000429205 CCL14Q16627 93 aa14.21□□□□□ -0.13
SENP3-202ENST00000429205 ZPBP2Q6X784 338 aa14.21□□□□□ -0.13
SENP3-202ENST00000429205 DNAAF5Q86Y56 855 aa14.21□□□□□ -0.13
SENP3-202ENST00000429205 ZBTB8OSQ8IWT0 167 aa14.21□□□□□ -0.13
SENP3-202ENST00000429205 FBXL13Q8NEE6 735 aa14.21□□□□□ -0.13
SENP3-202ENST00000429205 ZNF516Q92618 1163 aa14.21□□□□□ -0.13
SENP3-202ENST00000429205 ELMO3Q96BJ8 720 aa14.21□□□□□ -0.13
SENP3-202ENST00000429205 MRPL4Q9BYD3 311 aaKnown RBP14.21□□□□□ -0.13
SENP3-202ENST00000429205 TUT1Q9H6E5 874 aaKnown RBP14.21□□□□□ -0.13
SENP3-202ENST00000429205 TLL2Q9Y6L7 1015 aa14.21□□□□□ -0.13
SENP3-202ENST00000429205 CLDN3O15551 220 aa14.21□□□□□ -0.14
SENP3-202ENST00000429205 MOCS3O95396 460 aa14.21□□□□□ -0.14
SENP3-202ENST00000429205 LDHAP00338 332 aaKnown RBP14.21□□□□□ -0.14
SENP3-202ENST00000429205 TNFAIP2Q03169 654 aa14.21□□□□□ -0.14
SENP3-202ENST00000429205 MAPK6Q16659 721 aa14.21□□□□□ -0.14
SENP3-202ENST00000429205 ANKRD20A8PQ5CZ79 823 aa14.21□□□□□ -0.14
SENP3-202ENST00000429205 NAA35Q5VZE5 725 aa14.21□□□□□ -0.14
SENP3-202ENST00000429205 ZBTB33Q86T24 672 aa14.21□□□□□ -0.14
SENP3-202ENST00000429205 PLPP6Q8IY26 295 aa14.21□□□□□ -0.14
SENP3-202ENST00000429205 OLIG1Q8TAK6 271 aa14.21□□□□□ -0.14
SENP3-202ENST00000429205 CCDC110Q8TBZ0 833 aa14.21□□□□□ -0.14
SENP3-202ENST00000429205 RUBCNQ92622 972 aa14.21□□□□□ -0.14
SENP3-202ENST00000429205 VMP1Q96GC9 406 aa14.21□□□□□ -0.14
SENP3-202ENST00000429205 HNRNPABQ99729 332 aaKnown RBP14.21□□□□□ -0.14
SENP3-202ENST00000429205 C2orf40Q9H1Z8 148 aa14.21□□□□□ -0.14
SENP3-202ENST00000429205 RAB20Q9NX57 234 aa14.21□□□□□ -0.14
SENP3-202ENST00000429205 RBAKQ9NYW8 714 aaPredicted RBP14.21□□□□□ -0.14
SENP3-202ENST00000429205 NAGPAQ9UK23 515 aa14.21□□□□□ -0.14
SENP3-202ENST00000429205 MAFFQ9ULX9 164 aa14.21□□□□□ -0.14
SENP3-202ENST00000429205 SIP14410 1827 aa14.2□□□□□ -0.14
SENP3-202ENST00000429205 ZNF236Q9UL36 1845 aa14.2□□□□□ -0.14
SENP3-202ENST00000429205 DDX3XO00571 662 aaKnown RBP eCLIP14.2□□□□□ -0.145e-6■■■□□ 14.6
SENP3-202ENST00000429205 TOM1L1O75674 476 aa14.2□□□□□ -0.14
SENP3-202ENST00000429205 ATP1A1P05023 1023 aaKnown RBP14.2□□□□□ -0.14
SENP3-202ENST00000429205 CLTAP09496 248 aa14.2□□□□□ -0.14
SENP3-202ENST00000429205 HOXC6P09630 235 aa14.2□□□□□ -0.14
SENP3-202ENST00000429205 HOXD8P13378 290 aaPredicted RBP14.2□□□□□ -0.14
SENP3-202ENST00000429205 CYP2B6P20813 491 aa14.2□□□□□ -0.14
SENP3-202ENST00000429205 CLK1P49759 484 aaKnown RBP14.2□□□□□ -0.14
SENP3-202ENST00000429205 GPC3P51654 580 aa14.2□□□□□ -0.14
SENP3-202ENST00000429205 GUCY2FP51841 1108 aa14.2□□□□□ -0.14
SENP3-202ENST00000429205 CLDN10P78369 228 aa14.2□□□□□ -0.14
SENP3-202ENST00000429205 ENPEPQ07075 957 aa14.2□□□□□ -0.14
SENP3-202ENST00000429205 CRHR2Q13324 411 aa14.2□□□□□ -0.14
SENP3-202ENST00000429205 SPCS2Q15005 226 aa14.2□□□□□ -0.14
SENP3-202ENST00000429205 C4orf46Q504U0 113 aa14.2□□□□□ -0.14
SENP3-202ENST00000429205 RNF187Q5TA31 235 aaPredicted RBP14.2□□□□□ -0.14
SENP3-202ENST00000429205 ALKBH5Q6P6C2 394 aaKnown RBP14.2□□□□□ -0.14
SENP3-202ENST00000429205 CCNI2Q6ZMN8 369 aaPredicted RBP14.2□□□□□ -0.14
SENP3-202ENST00000429205 PPM1KQ8N3J5 372 aa14.2□□□□□ -0.14
SENP3-202ENST00000429205 SCAIQ8N9R8 606 aa14.2□□□□□ -0.14
SENP3-202ENST00000429205 DQX1Q8TE96 717 aaKnown RBP14.2□□□□□ -0.14
SENP3-202ENST00000429205 USP6NLQ92738 828 aa14.2□□□□□ -0.14
SENP3-202ENST00000429205 GFM2Q969S9 779 aaKnown RBP14.2□□□□□ -0.14
SENP3-202ENST00000429205 LENG1Q96BZ8 264 aaPredicted RBP14.2□□□□□ -0.14
SENP3-202ENST00000429205 ITPKCQ96DU7 683 aa14.2□□□□□ -0.14
SENP3-202ENST00000429205 KREMEN1Q96MU8 473 aa14.2□□□□□ -0.14
SENP3-202ENST00000429205 FNBP1Q96RU3 617 aa14.2□□□□□ -0.14
SENP3-202ENST00000429205 ACO2Q99798 780 aaKnown RBP14.2□□□□□ -0.14
SENP3-202ENST00000429205 INO80BQ9C086 356 aaPredicted RBP14.2□□□□□ -0.14
SENP3-202ENST00000429205 MINDY3Q9H8M7 445 aa14.2□□□□□ -0.14
SENP3-202ENST00000429205 TMCC3Q9ULS5 477 aa14.2□□□□□ -0.14
SENP3-202ENST00000429205 L3MBTL1Q9Y468 752 aa14.2□□□□□ -0.14
SENP3-202ENST00000429205 PTPRJQ12913 1337 aa14.2□□□□□ -0.14
SENP3-202ENST00000429205 INO80B-WBP1J3KQ70 363 aa14.19□□□□□ -0.14
SENP3-202ENST00000429205 DYNC1LI2O43237 492 aaPredicted RBP14.19□□□□□ -0.14
SENP3-202ENST00000429205 HSPA1AP0DMV8 641 aaKnown RBP14.19□□□□□ -0.14
SENP3-202ENST00000429205 HSPA1BP0DMV9 641 aaKnown RBP14.19□□□□□ -0.14
SENP3-202ENST00000429205 TNNI1P19237 187 aa14.19□□□□□ -0.14
SENP3-202ENST00000429205 MTTPP55157 894 aa14.19□□□□□ -0.14
SENP3-202ENST00000429205 RAB15P59190 212 aa14.19□□□□□ -0.14
SENP3-202ENST00000429205 PTENP60484 403 aa14.19□□□□□ -0.14
SENP3-202ENST00000429205 TFDP1Q14186 410 aa14.19□□□□□ -0.14
SENP3-202ENST00000429205 IFI16Q16666 785 aaKnown RBP14.19□□□□□ -0.14
SENP3-202ENST00000429205 DGKDQ16760 1214 aa14.19□□□□□ -0.14
SENP3-202ENST00000429205 C15orf39Q6ZRI6 1047 aa14.19□□□□□ -0.14
SENP3-202ENST00000429205 NLRP9Q7RTR0 991 aa14.19□□□□□ -0.14
SENP3-202ENST00000429205 LURAP1LQ8IV03 231 aa14.19□□□□□ -0.14
SENP3-202ENST00000429205 WDR75Q8IWA0 830 aaKnown RBP14.19□□□□□ -0.14
SENP3-202ENST00000429205 SAMD14Q8IZD0 417 aaPredicted RBP14.19□□□□□ -0.14
SENP3-202ENST00000429205 PPP1R16BQ96T49 567 aa14.19□□□□□ -0.14
SENP3-202ENST00000429205 SYT11Q9BT88 431 aa14.19□□□□□ -0.14
SENP3-202ENST00000429205 ZFYVE28Q9HCC9 887 aa14.19□□□□□ -0.14
SENP3-202ENST00000429205 NENFQ9UMX5 172 aa14.19□□□□□ -0.14
SENP3-202ENST00000429205 LRRC42Q9Y546 428 aa14.19□□□□□ -0.14
SENP3-202ENST00000429205 B4GALT5O43286 388 aa14.19□□□□□ -0.14
SENP3-202ENST00000429205 NDUFB5O43674 189 aa14.19□□□□□ -0.14
SENP3-202ENST00000429205 BUB1O43683 1085 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms