RNA–Protein interactions for RNA: ENST00000428848.7

CDH13-202, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CDH13, Length 2,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-202ENST00000428848 C2CD2LO14523 706 aa9.29□□□□□ -0.92
CDH13-202ENST00000428848 TLR3O15455 904 aaKnown RBP9.29□□□□□ -0.92
CDH13-202ENST00000428848 CD58P19256 250 aa9.29□□□□□ -0.92
CDH13-202ENST00000428848 TARSP26639 723 aaKnown RBP9.29□□□□□ -0.92
CDH13-202ENST00000428848 PTPN7P35236 360 aa9.29□□□□□ -0.92
CDH13-202ENST00000428848 RPA3P35244 121 aaPredicted RBP9.29□□□□□ -0.92
CDH13-202ENST00000428848 WNT7BP56706 349 aa9.29□□□□□ -0.92
CDH13-202ENST00000428848 RTP1P59025 263 aa9.29□□□□□ -0.92
CDH13-202ENST00000428848 C1QBPQ07021 282 aaKnown RBP9.29□□□□□ -0.92
CDH13-202ENST00000428848 PSMD6Q15008 389 aa9.29□□□□□ -0.92
CDH13-202ENST00000428848 MORF4L2Q15014 288 aa9.29□□□□□ -0.92
CDH13-202ENST00000428848 PGM5Q15124 567 aa9.29□□□□□ -0.92
CDH13-202ENST00000428848 OASLQ15646 514 aaKnown RBP9.29□□□□□ -0.92
CDH13-202ENST00000428848 SLC45A4Q5BKX6 768 aa9.29□□□□□ -0.92
CDH13-202ENST00000428848 EFHC2Q5JST6 749 aa9.29□□□□□ -0.92
CDH13-202ENST00000428848 WASHC2DQ5SRD0 308 aa9.29□□□□□ -0.92
CDH13-202ENST00000428848 RNASEH2BQ5TBB1 312 aaKnown RBP9.29□□□□□ -0.92
CDH13-202ENST00000428848 RDM1Q8NG50 284 aa9.29□□□□□ -0.92
CDH13-202ENST00000428848 ZNF398Q8TD17 642 aa9.29□□□□□ -0.92
CDH13-202ENST00000428848 KCNN1Q92952 543 aa9.29□□□□□ -0.92
CDH13-202ENST00000428848 TBC1D10AQ9BXI6 508 aa9.29□□□□□ -0.92
CDH13-202ENST00000428848 LNPEPQ9UIQ6 1025 aa9.29□□□□□ -0.92
CDH13-202ENST00000428848 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.29□□□□□ -0.92
CDH13-202ENST00000428848 SCINQ9Y6U3 715 aa9.29□□□□□ -0.92
CDH13-202ENST00000428848 TCRBV5S1A1TA0A578 114 aa9.29□□□□□ -0.92
CDH13-202ENST00000428848 HGSO14964 777 aaPredicted RBP9.29□□□□□ -0.92
CDH13-202ENST00000428848 DKC1O60832 514 aaKnown RBP eCLIP9.29□□□□□ -0.92
CDH13-202ENST00000428848 VNN1O95497 513 aa9.29□□□□□ -0.92
CDH13-202ENST00000428848 HLA-DRAP01903 254 aa9.29□□□□□ -0.92
CDH13-202ENST00000428848 ZSCAN5DPP0CG00 497 aa9.29□□□□□ -0.92
CDH13-202ENST00000428848 PSMC4P43686 418 aa9.29□□□□□ -0.92
CDH13-202ENST00000428848 RAD23BP54727 409 aa9.29□□□□□ -0.92
CDH13-202ENST00000428848 KRT76Q01546 638 aa9.29□□□□□ -0.92
CDH13-202ENST00000428848 MCL1Q07820 350 aa9.29□□□□□ -0.92
CDH13-202ENST00000428848 CTC1Q2NKJ3 1217 aa9.29□□□□□ -0.92
CDH13-202ENST00000428848 WDR72Q3MJ13 1102 aa9.29□□□□□ -0.92
CDH13-202ENST00000428848 ATP13A4Q4VNC1 1196 aa9.29□□□□□ -0.92
CDH13-202ENST00000428848 LRRC38Q5VT99 294 aa9.29□□□□□ -0.92
CDH13-202ENST00000428848 TDRD10Q5VZ19 366 aaKnown RBP9.29□□□□□ -0.92
CDH13-202ENST00000428848 PPP1R2P3Q6NXS1 205 aa9.29□□□□□ -0.92
CDH13-202ENST00000428848 TMEM154Q6P9G4 183 aa9.29□□□□□ -0.92
CDH13-202ENST00000428848 MFSD7Q6UXD7 560 aa9.29□□□□□ -0.92
CDH13-202ENST00000428848 OTOAQ7RTW8 1153 aa9.29□□□□□ -0.92
CDH13-202ENST00000428848 FEZF2Q8TBJ5 459 aa9.29□□□□□ -0.92
CDH13-202ENST00000428848 KCNV2Q8TDN2 545 aa9.29□□□□□ -0.92
CDH13-202ENST00000428848 ASAP3Q8TDY4 903 aa9.29□□□□□ -0.92
CDH13-202ENST00000428848 NKD2Q969F2 451 aaPredicted RBP9.29□□□□□ -0.92
CDH13-202ENST00000428848 TAAR1Q96RJ0 339 aa9.29□□□□□ -0.92
CDH13-202ENST00000428848 SMC6Q96SB8 1091 aa9.29□□□□□ -0.92
CDH13-202ENST00000428848 SENP7Q9BQF6 1050 aa9.29□□□□□ -0.92
CDH13-202ENST00000428848 DHRS4Q9BTZ2 278 aa9.29□□□□□ -0.92
CDH13-202ENST00000428848 MAK16Q9BXY0 300 aaKnown RBP9.29□□□□□ -0.92
CDH13-202ENST00000428848 PHACTR1Q9C0D0 580 aa9.29□□□□□ -0.92
CDH13-202ENST00000428848 SLC38A10Q9HBR0 1119 aa9.29□□□□□ -0.92
CDH13-202ENST00000428848 APOBEC3GQ9HC16 384 aaKnown RBP9.29□□□□□ -0.92
CDH13-202ENST00000428848 ARHGAP28Q9P2N2 729 aa9.29□□□□□ -0.92
CDH13-202ENST00000428848 PGAP2Q9UHJ9 254 aa9.29□□□□□ -0.92
CDH13-202ENST00000428848 STYXL1Q9Y6J8 313 aa9.29□□□□□ -0.92
CDH13-202ENST00000428848 A0A1W2PPM1 405 aa9.28□□□□□ -0.92
CDH13-202ENST00000428848 TMEM191CA6NGB0 347 aa9.28□□□□□ -0.92
CDH13-202ENST00000428848 POC1B-GALNT4F8VUJ3 575 aa9.28□□□□□ -0.92
CDH13-202ENST00000428848 EXTL3O43909 919 aa9.28□□□□□ -0.92
CDH13-202ENST00000428848 LMNAP02545 664 aaKnown RBP9.28□□□□□ -0.92
CDH13-202ENST00000428848 TMEM191BP0C7N4 346 aa9.28□□□□□ -0.92
CDH13-202ENST00000428848 KRT10P13645 584 aa9.28□□□□□ -0.92
CDH13-202ENST00000428848 ETS1P14921 441 aa9.28□□□□□ -0.92
CDH13-202ENST00000428848 TCF4P15884 667 aa9.28□□□□□ -0.92
CDH13-202ENST00000428848 TUBP50607 506 aa9.28□□□□□ -0.92
CDH13-202ENST00000428848 SOX10P56693 466 aa9.28□□□□□ -0.92
CDH13-202ENST00000428848 GPX6P59796 221 aa9.28□□□□□ -0.92
CDH13-202ENST00000428848 ZNF252P-AS1Q0IIN9 211 aa9.28□□□□□ -0.92
CDH13-202ENST00000428848 CUL2Q13617 745 aa9.28□□□□□ -0.92
CDH13-202ENST00000428848 GSTA5Q7RTV2 222 aa9.28□□□□□ -0.92
CDH13-202ENST00000428848 NLRX1Q86UT6 975 aa9.28□□□□□ -0.92
CDH13-202ENST00000428848 NCAPG2Q86XI2 1143 aa9.28□□□□□ -0.92
CDH13-202ENST00000428848 C4orf33Q8N1A6 199 aa9.28□□□□□ -0.92
CDH13-202ENST00000428848 LRRC8CQ8TDW0 803 aa9.28□□□□□ -0.92
CDH13-202ENST00000428848 MZB1Q8WU39 189 aa9.28□□□□□ -0.92
CDH13-202ENST00000428848 ZNF75CPQ92670 426 aaPredicted RBP9.28□□□□□ -0.92
CDH13-202ENST00000428848 FAM213AQ9BRX8 229 aa9.28□□□□□ -0.92
CDH13-202ENST00000428848 FAM192AQ9GZU8 254 aa9.28□□□□□ -0.92
CDH13-202ENST00000428848 XPNPEP1Q9NQW7 623 aa9.28□□□□□ -0.92
CDH13-202ENST00000428848 SAR1AQ9NR31 198 aa9.28□□□□□ -0.92
CDH13-202ENST00000428848 PICK1Q9NRD5 415 aa9.28□□□□□ -0.92
CDH13-202ENST00000428848 KANSL3Q9P2N6 904 aa9.28□□□□□ -0.92
CDH13-202ENST00000428848 IP6K2Q9UHH9 426 aa9.28□□□□□ -0.92
CDH13-202ENST00000428848 ZMYND8Q9ULU4 1186 aaPredicted RBP9.28□□□□□ -0.92
CDH13-202ENST00000428848 SHOC2Q9UQ13 582 aa9.28□□□□□ -0.92
CDH13-202ENST00000428848 FARP1Q9Y4F1 1045 aaPredicted RBP9.28□□□□□ -0.92
CDH13-202ENST00000428848 NUMBLQ9Y6R0 609 aa9.28□□□□□ -0.92
CDH13-202ENST00000428848 LTBP3Q9NS15 1303 aa9.28□□□□□ -0.92
CDH13-202ENST00000428848 COL4A5P29400 1685 aa9.28□□□□□ -0.92
CDH13-202ENST00000428848 FER1L6Q2WGJ9 1857 aa9.28□□□□□ -0.92
CDH13-202ENST00000428848 DOCK5Q9H7D0 1870 aa9.28□□□□□ -0.92
CDH13-202ENST00000428848 HNRNPDLO14979 420 aaKnown RBP9.27□□□□□ -0.92
CDH13-202ENST00000428848 CREB3O43889 395 aa9.27□□□□□ -0.92
CDH13-202ENST00000428848 ZNF862O60290 1169 aa9.27□□□□□ -0.92
CDH13-202ENST00000428848 HNRNPCL1O60812 293 aaKnown RBP9.27□□□□□ -0.92
CDH13-202ENST00000428848 TJP3O95049 919 aa9.27□□□□□ -0.92
CDH13-202ENST00000428848 ITGAVP06756 1048 aa9.27□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms