RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 BPIFB1Q8TDL5 484 aa18.36■□□□□ 0.53
TRIM39-209ENST00000428728 ANKRD36BP1Q96IX9 119 aa18.36■□□□□ 0.53
TRIM39-209ENST00000428728 TRIM9Q9C026 710 aa18.36■□□□□ 0.53
TRIM39-209ENST00000428728 C8orf33Q9H7E9 229 aaPredicted RBP18.36■□□□□ 0.53
TRIM39-209ENST00000428728 RBM12Q9NTZ6 932 aaKnown RBP18.36■□□□□ 0.53
TRIM39-209ENST00000428728 KBTBD4Q9NVX7 518 aa18.36■□□□□ 0.53
TRIM39-209ENST00000428728 NCDNQ9UBB6 729 aa18.36■□□□□ 0.53
TRIM39-209ENST00000428728 SMG5Q9UPR3 1016 aaKnown RBP18.36■□□□□ 0.53
TRIM39-209ENST00000428728 KIAA1549LQ6ZVL6 1849 aa18.35■□□□□ 0.53
TRIM39-209ENST00000428728 SPECC1L-ADORA2AF8WAN1 911 aa18.35■□□□□ 0.53
TRIM39-209ENST00000428728 YEATS4O95619 227 aa18.35■□□□□ 0.53
TRIM39-209ENST00000428728 CHRNB1P11230 501 aa18.35■□□□□ 0.53
TRIM39-209ENST00000428728 CTHP32929 405 aa18.35■□□□□ 0.53
TRIM39-209ENST00000428728 NLRP12P59046 1061 aa18.35■□□□□ 0.53
TRIM39-209ENST00000428728 RBP5P82980 135 aa18.35■□□□□ 0.53
TRIM39-209ENST00000428728 NFE2Q16621 373 aaPredicted RBP18.35■□□□□ 0.53
TRIM39-209ENST00000428728 INTS6LQ5JSJ4 861 aaKnown RBP18.35■□□□□ 0.53
TRIM39-209ENST00000428728 TXNDC11Q6PKC3 985 aa18.35■□□□□ 0.53
TRIM39-209ENST00000428728 SHC4Q6S5L8 630 aa18.35■□□□□ 0.53
TRIM39-209ENST00000428728 CBWD2Q8IUF1 395 aa18.35■□□□□ 0.53
TRIM39-209ENST00000428728 TMEM86AQ8N2M4 240 aa18.35■□□□□ 0.53
TRIM39-209ENST00000428728 OR5B17Q8NGF7 314 aa18.35■□□□□ 0.53
TRIM39-209ENST00000428728 LEO1Q8WVC0 666 aaPredicted RBP18.35■□□□□ 0.53
TRIM39-209ENST00000428728 MSANTD3Q96H12 275 aa18.35■□□□□ 0.53
TRIM39-209ENST00000428728 IER2Q9BTL4 223 aa18.35■□□□□ 0.53
TRIM39-209ENST00000428728 SLC46A2Q9BY10 475 aa18.35■□□□□ 0.53
TRIM39-209ENST00000428728 LRRC27Q9C0I9 530 aa18.35■□□□□ 0.53
TRIM39-209ENST00000428728 CUEDC2Q9H467 287 aa18.35■□□□□ 0.53
TRIM39-209ENST00000428728 INTS13Q9NVM9 706 aa18.35■□□□□ 0.53
TRIM39-209ENST00000428728 OBP2AQ9NY56 170 aa18.35■□□□□ 0.53
TRIM39-209ENST00000428728 HSPBP1Q9NZL4 362 aa18.35■□□□□ 0.53
TRIM39-209ENST00000428728 R3HCC1Q9Y3T6 440 aaKnown RBP18.35■□□□□ 0.53
TRIM39-209ENST00000428728 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.34■□□□□ 0.53
TRIM39-209ENST00000428728 ZNF233A6NK53 670 aa18.34■□□□□ 0.53
TRIM39-209ENST00000428728 KIAA0391O15091 583 aaKnown RBP18.34■□□□□ 0.53
TRIM39-209ENST00000428728 CUTAO60888 179 aa18.34■□□□□ 0.53
TRIM39-209ENST00000428728 TNNC2P02585 160 aa18.34■□□□□ 0.53
TRIM39-209ENST00000428728 HMGA1P17096 107 aaKnown RBP18.34■□□□□ 0.53
TRIM39-209ENST00000428728 CYP2F1P24903 491 aa18.34■□□□□ 0.53
TRIM39-209ENST00000428728 HOXD13P35453 343 aa18.34■□□□□ 0.53
TRIM39-209ENST00000428728 CCR3P51677 355 aa18.34■□□□□ 0.53
TRIM39-209ENST00000428728 SATB1Q01826 763 aa18.34■□□□□ 0.53
TRIM39-209ENST00000428728 LRRC32Q14392 662 aa18.34■□□□□ 0.53
TRIM39-209ENST00000428728 GAS6Q14393 721 aa18.34■□□□□ 0.53
TRIM39-209ENST00000428728 PON2Q15165 354 aa18.34■□□□□ 0.53
TRIM39-209ENST00000428728 WDR44Q5JSH3 913 aa18.34■□□□□ 0.53
TRIM39-209ENST00000428728 FAM26FQ5R3K3 315 aa18.34■□□□□ 0.53
TRIM39-209ENST00000428728 Q6ZS52 159 aa18.34■□□□□ 0.53
TRIM39-209ENST00000428728 TMEM150AQ86TG1 271 aa18.34■□□□□ 0.53
TRIM39-209ENST00000428728 HSCBQ8IWL3 235 aa18.34■□□□□ 0.53
TRIM39-209ENST00000428728 CMTM8Q8IZV2 173 aa18.34■□□□□ 0.53
TRIM39-209ENST00000428728 MAB21L3Q8N8X9 362 aa18.34■□□□□ 0.53
TRIM39-209ENST00000428728 NELL1Q92832 810 aa18.34■□□□□ 0.53
TRIM39-209ENST00000428728 ACBD6Q9BR61 282 aa18.34■□□□□ 0.53
TRIM39-209ENST00000428728 GDAP2Q9NXN4 497 aa18.34■□□□□ 0.53
TRIM39-209ENST00000428728 GTF3C4Q9UKN8 822 aa18.34■□□□□ 0.53
TRIM39-209ENST00000428728 MYH10P35580 1976 aa18.33■□□□□ 0.53
TRIM39-209ENST00000428728 MYBPHLA2RUH7 354 aa18.33■□□□□ 0.52
TRIM39-209ENST00000428728 EIF3DO15371 548 aaKnown RBP eCLIP18.33■□□□□ 0.52
TRIM39-209ENST00000428728 LILRB5O75023 590 aa18.33■□□□□ 0.52
TRIM39-209ENST00000428728 HSP90AA1P07900 732 aaKnown RBP18.33■□□□□ 0.52
TRIM39-209ENST00000428728 CSH1P0DML2 217 aa18.33■□□□□ 0.52
TRIM39-209ENST00000428728 CSH2P0DML3 217 aa18.33■□□□□ 0.52
TRIM39-209ENST00000428728 TDGF1P13385 188 aa18.33■□□□□ 0.52
TRIM39-209ENST00000428728 CASP1P29466 404 aa18.33■□□□□ 0.52
TRIM39-209ENST00000428728 AVPR1AP37288 418 aa18.33■□□□□ 0.52
TRIM39-209ENST00000428728 MLLT6P55198 1093 aaPredicted RBP18.33■□□□□ 0.52
TRIM39-209ENST00000428728 AMPD3Q01432 767 aa18.33■□□□□ 0.52
TRIM39-209ENST00000428728 MYO1EQ12965 1108 aa18.33■□□□□ 0.52
TRIM39-209ENST00000428728 PPP2R5DQ14738 602 aa18.33■□□□□ 0.52
TRIM39-209ENST00000428728 DDR2Q16832 855 aa18.33■□□□□ 0.52
TRIM39-209ENST00000428728 TXNDC8Q6A555 127 aa18.33■□□□□ 0.52
TRIM39-209ENST00000428728 C1orf228Q6PIY5 440 aa18.33■□□□□ 0.52
TRIM39-209ENST00000428728 RALGPS2Q86X27 583 aaPredicted RBP18.33■□□□□ 0.52
TRIM39-209ENST00000428728 SPATA2LQ8IUW3 424 aaPredicted RBP18.33■□□□□ 0.52
TRIM39-209ENST00000428728 NELFCDQ8IXH7 590 aa18.33■□□□□ 0.52
TRIM39-209ENST00000428728 TOP6BLQ8N6T0 577 aa18.33■□□□□ 0.52
TRIM39-209ENST00000428728 CELF5Q8N6W0 485 aaKnown RBP18.33■□□□□ 0.52
TRIM39-209ENST00000428728 IQUBQ8NA54 791 aa18.33■□□□□ 0.52
TRIM39-209ENST00000428728 HPDLQ96IR7 371 aa18.33■□□□□ 0.52
TRIM39-209ENST00000428728 PKMYT1Q99640 499 aa18.33■□□□□ 0.52
TRIM39-209ENST00000428728 EPC1Q9H2F5 836 aa18.33■□□□□ 0.52
TRIM39-209ENST00000428728 CCL26Q9Y258 94 aa18.33■□□□□ 0.52
TRIM39-209ENST00000428728 ZNF292O60281 2723 aa18.32■□□□□ 0.52
TRIM39-209ENST00000428728 GPR179Q6PRD1 2367 aa18.32■□□□□ 0.52
TRIM39-209ENST00000428728 EML5Q05BV3 1969 aa18.32■□□□□ 0.52
TRIM39-209ENST00000428728 DCHS1Q96JQ0 3298 aa18.32■□□□□ 0.52
TRIM39-209ENST00000428728 POLR2DO15514 142 aaKnown RBP18.32■□□□□ 0.52
TRIM39-209ENST00000428728 F11P03951 625 aa18.32■□□□□ 0.52
TRIM39-209ENST00000428728 PCSK1P29120 753 aa18.32■□□□□ 0.52
TRIM39-209ENST00000428728 WEE1P30291 646 aa18.32■□□□□ 0.52
TRIM39-209ENST00000428728 CYP2J2P51589 502 aa18.32■□□□□ 0.52
TRIM39-209ENST00000428728 PSMC1P62191 440 aaKnown RBP18.32■□□□□ 0.52
TRIM39-209ENST00000428728 RPL10AP62906 217 aaKnown RBP18.32■□□□□ 0.52
TRIM39-209ENST00000428728 PLCB2Q00722 1185 aa18.32■□□□□ 0.52
TRIM39-209ENST00000428728 SOWAHAQ2M3V2 549 aa18.32■□□□□ 0.52
TRIM39-209ENST00000428728 SCN4BQ8IWT1 228 aa18.32■□□□□ 0.52
TRIM39-209ENST00000428728 MRPS31Q92665 395 aaKnown RBP18.32■□□□□ 0.52
TRIM39-209ENST00000428728 SNX21Q969T3 373 aa18.32■□□□□ 0.52
TRIM39-209ENST00000428728 RMDN1Q96DB5 314 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms