RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 DRG1Q9Y295 367 aaKnown RBP5.4□□□□□ -1.54
RIF1-203ENST00000428287 HNRNPRO43390 633 aaKnown RBP5.4□□□□□ -1.54
RIF1-203ENST00000428287 TRMUO75648 421 aaKnown RBP5.4□□□□□ -1.54
RIF1-203ENST00000428287 CYP1A2P05177 515 aa5.4□□□□□ -1.54
RIF1-203ENST00000428287 ESRRAP11474 423 aaPredicted RBP5.4□□□□□ -1.54
RIF1-203ENST00000428287 UNGP13051 313 aaPredicted RBP5.4□□□□□ -1.54
RIF1-203ENST00000428287 ADRA2BP18089 450 aa5.4□□□□□ -1.54
RIF1-203ENST00000428287 DDB1Q16531 1140 aa5.4□□□□□ -1.54
RIF1-203ENST00000428287 C1orf220Q5T0J3 134 aa5.4□□□□□ -1.54
RIF1-203ENST00000428287 IZUMO2Q6UXV1 221 aa5.4□□□□□ -1.54
RIF1-203ENST00000428287 KIF6Q6ZMV9 814 aa5.4□□□□□ -1.54
RIF1-203ENST00000428287 ADAT2Q7Z6V5 191 aaKnown RBP5.4□□□□□ -1.54
RIF1-203ENST00000428287 TRIM42Q8IWZ5 723 aa5.4□□□□□ -1.54
RIF1-203ENST00000428287 EXD1Q8NHP7 514 aa5.4□□□□□ -1.54
RIF1-203ENST00000428287 MTBPQ96DY7 904 aa5.4□□□□□ -1.54
RIF1-203ENST00000428287 FAM20AQ96MK3 541 aa5.4□□□□□ -1.54
RIF1-203ENST00000428287 ZNF287Q9HBT7 754 aa5.4□□□□□ -1.54
RIF1-203ENST00000428287 KCNK9Q9NPC2 374 aa5.4□□□□□ -1.54
RIF1-203ENST00000428287 VPS45Q9NRW7 570 aa5.4□□□□□ -1.54
RIF1-203ENST00000428287 SNCAIPQ9Y6H5 919 aa5.4□□□□□ -1.54
RIF1-203ENST00000428287 ARHGAP10A1A4S6 786 aa5.4□□□□□ -1.54
RIF1-203ENST00000428287 OR6B1O95007 311 aa5.4□□□□□ -1.54
RIF1-203ENST00000428287 ABCB4P21439 1286 aa5.4□□□□□ -1.54
RIF1-203ENST00000428287 CHKAP35790 457 aa5.4□□□□□ -1.54
RIF1-203ENST00000428287 PHKA2P46019 1235 aa5.4□□□□□ -1.54
RIF1-203ENST00000428287 VPS41P49754 854 aa5.4□□□□□ -1.54
RIF1-203ENST00000428287 ITGA8P53708 1063 aa5.4□□□□□ -1.54
RIF1-203ENST00000428287 ADARP55265 1226 aaKnown RBP5.4□□□□□ -1.54
RIF1-203ENST00000428287 CENPCQ03188 943 aa5.4□□□□□ -1.54
RIF1-203ENST00000428287 KRT17Q04695 432 aa5.4□□□□□ -1.54
RIF1-203ENST00000428287 AADACL2Q6P093 401 aa5.4□□□□□ -1.54
RIF1-203ENST00000428287 B3GNT9Q6UX72 402 aa5.4□□□□□ -1.54
RIF1-203ENST00000428287 U2AF1L4Q8WU68 220 aaKnown RBP5.4□□□□□ -1.54
RIF1-203ENST00000428287 LRGUKQ96M69 825 aa5.4□□□□□ -1.54
RIF1-203ENST00000428287 C7orf26Q96N11 449 aa5.4□□□□□ -1.54
RIF1-203ENST00000428287 ST6GALNAC4Q9H4F1 302 aa5.4□□□□□ -1.54
RIF1-203ENST00000428287 KIAA1024Q9UPX6 916 aa5.4□□□□□ -1.54
RIF1-203ENST00000428287 ZHX2Q9Y6X8 837 aa5.4□□□□□ -1.54
RIF1-203ENST00000428287 HTR3EA5X5Y0 456 aa5.4□□□□□ -1.55
RIF1-203ENST00000428287 C1QAP02745 245 aa5.4□□□□□ -1.55
RIF1-203ENST00000428287 KRT15P19012 456 aa5.4□□□□□ -1.55
RIF1-203ENST00000428287 SGO2Q562F6 1265 aa5.4□□□□□ -1.55
RIF1-203ENST00000428287 DEPDC1Q5TB30 811 aa5.4□□□□□ -1.55
RIF1-203ENST00000428287 RNF168Q8IYW5 571 aaPredicted RBP5.4□□□□□ -1.55
RIF1-203ENST00000428287 OGFOD1Q8N543 542 aa5.4□□□□□ -1.55
RIF1-203ENST00000428287 CHPT1Q8WUD6 406 aa5.4□□□□□ -1.55
RIF1-203ENST00000428287 NPHS2Q9NP85 383 aa5.4□□□□□ -1.55
RIF1-203ENST00000428287 CHST7Q9NS84 486 aa5.4□□□□□ -1.55
RIF1-203ENST00000428287 CEP250Q9BV73 2442 aa5.4□□□□□ -1.55
RIF1-203ENST00000428287 NYNRINQ9P2P1 1898 aaKnown RBP5.4□□□□□ -1.55
RIF1-203ENST00000428287 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.4□□□□□ -1.55
RIF1-203ENST00000428287 SPATA31D3P0C874 917 aa5.4□□□□□ -1.55
RIF1-203ENST00000428287 ZNF23P17027 643 aa5.4□□□□□ -1.55
RIF1-203ENST00000428287 ADSSP30520 456 aa5.4□□□□□ -1.55
RIF1-203ENST00000428287 NAPAP54920 295 aa5.4□□□□□ -1.55
RIF1-203ENST00000428287 CBX3Q13185 183 aa5.4□□□□□ -1.55
RIF1-203ENST00000428287 PRKD1Q15139 912 aaPredicted RBP5.4□□□□□ -1.55
RIF1-203ENST00000428287 PARP10Q53GL7 1025 aa5.4□□□□□ -1.55
RIF1-203ENST00000428287 DCLRE1AQ6PJP8 1040 aa5.4□□□□□ -1.55
RIF1-203ENST00000428287 TRIM67Q6ZTA4 783 aa5.4□□□□□ -1.55
RIF1-203ENST00000428287 SPATA31D4Q6ZUB0 917 aa5.4□□□□□ -1.55
RIF1-203ENST00000428287 ZNF720Q7Z2F6 126 aa5.4□□□□□ -1.55
RIF1-203ENST00000428287 CCDC25Q86WR0 208 aa5.4□□□□□ -1.55
RIF1-203ENST00000428287 DTX3LQ8TDB6 740 aa5.4□□□□□ -1.55
RIF1-203ENST00000428287 MCUR1Q96AQ8 359 aa5.4□□□□□ -1.55
RIF1-203ENST00000428287 RANBP9Q96S59 729 aa5.4□□□□□ -1.55
RIF1-203ENST00000428287 AGPAT1Q99943 283 aa5.4□□□□□ -1.55
RIF1-203ENST00000428287 KCND2Q9NZV8 630 aa5.4□□□□□ -1.55
RIF1-203ENST00000428287 RABGEF1Q9UJ41 708 aa5.4□□□□□ -1.55
RIF1-203ENST00000428287 TEX264Q9Y6I9 313 aa5.4□□□□□ -1.55
RIF1-203ENST00000428287 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.4□□□□□ -1.55
RIF1-203ENST00000428287 SMIM23A6NLE4 172 aa5.4□□□□□ -1.55
RIF1-203ENST00000428287 PTPN2P17706 415 aa5.4□□□□□ -1.55
RIF1-203ENST00000428287 ASPRV1Q53RT3 343 aa5.4□□□□□ -1.55
RIF1-203ENST00000428287 PACS1Q6VY07 963 aa5.4□□□□□ -1.55
RIF1-203ENST00000428287 C14orf37Q86TY3 774 aa5.4□□□□□ -1.55
RIF1-203ENST00000428287 FBXO27Q8NI29 283 aa5.4□□□□□ -1.55
RIF1-203ENST00000428287 GDAP1Q8TB36 358 aa5.4□□□□□ -1.55
RIF1-203ENST00000428287 ASIC3Q9UHC3 531 aa5.4□□□□□ -1.55
RIF1-203ENST00000428287 SOBPA7XYQ1 873 aa5.39□□□□□ -1.55
RIF1-203ENST00000428287 IPO5O00410 1097 aaKnown RBP5.39□□□□□ -1.55
RIF1-203ENST00000428287 TNFAIP8O95379 198 aa5.39□□□□□ -1.55
RIF1-203ENST00000428287 PTPN7P35236 360 aa5.39□□□□□ -1.55
RIF1-203ENST00000428287 TGFBIQ15582 683 aa5.39□□□□□ -1.55
RIF1-203ENST00000428287 TBCCQ15814 346 aa5.39□□□□□ -1.55
RIF1-203ENST00000428287 OGFRL1Q5TC84 451 aaPredicted RBP5.39□□□□□ -1.55
RIF1-203ENST00000428287 PCNX4Q63HM2 1172 aa5.39□□□□□ -1.55
RIF1-203ENST00000428287 C1orf186Q6ZWK4 172 aa5.39□□□□□ -1.55
RIF1-203ENST00000428287 DHDDSQ86SQ9 333 aa5.39□□□□□ -1.55
RIF1-203ENST00000428287 KIAA0825Q8IV33 1275 aa5.39□□□□□ -1.55
RIF1-203ENST00000428287 APBB2Q92870 758 aa5.39□□□□□ -1.55
RIF1-203ENST00000428287 KLC2Q9H0B6 622 aa5.39□□□□□ -1.55
RIF1-203ENST00000428287 EBF3Q9H4W6 596 aa5.39□□□□□ -1.55
RIF1-203ENST00000428287 AGPAT3Q9NRZ7 376 aa5.39□□□□□ -1.55
RIF1-203ENST00000428287 TRMT112Q9UI30 125 aaKnown RBP5.39□□□□□ -1.55
RIF1-203ENST00000428287 ADAMTSL1Q8N6G6 1762 aa5.39□□□□□ -1.55
RIF1-203ENST00000428287 PHIPQ8WWQ0 1821 aa5.39□□□□□ -1.55
RIF1-203ENST00000428287 FOXO6A8MYZ6 492 aa5.39□□□□□ -1.55
RIF1-203ENST00000428287 UBAP1LF5GYI3 381 aa5.39□□□□□ -1.55
RIF1-203ENST00000428287 FCHO1O14526 889 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms