RNA–Protein interactions for RNA: ENST00000428101.6

LMO1-202, Transcript of LIM domain only 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LMO1, Length 1,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-202ENST00000428101 KIAA1586Q9HCI6 787 aa29.26■■■□□ 2.27
LMO1-202ENST00000428101 FAM13BQ9NYF5 915 aa29.26■■■□□ 2.27
LMO1-202ENST00000428101 RCOR1Q9UKL0 485 aa29.26■■■□□ 2.27
LMO1-202ENST00000428101 FBXO4Q9UKT5 387 aa29.26■■■□□ 2.27
LMO1-202ENST00000428101 NDRG2Q9UN36 371 aaKnown RBP29.26■■■□□ 2.27
LMO1-202ENST00000428101 WDR87Q6ZQQ6 2873 aa29.26■■■□□ 2.27
LMO1-202ENST00000428101 HCRTO43612 131 aa29.25■■■□□ 2.27
LMO1-202ENST00000428101 MYL7Q01449 175 aa29.25■■■□□ 2.27
LMO1-202ENST00000428101 DUOXA2Q1HG44 320 aa29.25■■■□□ 2.27
LMO1-202ENST00000428101 ZNF528Q3MIS6 628 aa29.25■■■□□ 2.27
LMO1-202ENST00000428101 LIMS2Q7Z4I7 341 aa29.25■■■□□ 2.27
LMO1-202ENST00000428101 NELFCDQ8IXH7 590 aa29.25■■■□□ 2.27
LMO1-202ENST00000428101 YAF2Q8IY57 180 aa29.25■■■□□ 2.27
LMO1-202ENST00000428101 SPATA18Q8TC71 538 aa29.25■■■□□ 2.27
LMO1-202ENST00000428101 SLC46A2Q9BY10 475 aa29.25■■■□□ 2.27
LMO1-202ENST00000428101 OBP2AQ9NY56 170 aa29.25■■■□□ 2.27
LMO1-202ENST00000428101 CFAP45Q9UL16 551 aa29.25■■■□□ 2.27
LMO1-202ENST00000428101 EP300Q09472 2414 aaPredicted RBP29.25■■■□□ 2.27
LMO1-202ENST00000428101 GVINP1Q7Z2Y8 2422 aa29.25■■■□□ 2.27
LMO1-202ENST00000428101 OBSL1O75147 1896 aa29.25■■■□□ 2.27
LMO1-202ENST00000428101 UBE4BO95155 1302 aa29.24■■■□□ 2.27
LMO1-202ENST00000428101 CLIC2O15247 247 aa29.24■■■□□ 2.27
LMO1-202ENST00000428101 PRPF40AO75400 957 aaKnown RBP29.24■■■□□ 2.27
LMO1-202ENST00000428101 PRAMEF12O95522 483 aa29.24■■■□□ 2.27
LMO1-202ENST00000428101 LMNAP02545 664 aaKnown RBP29.24■■■□□ 2.27
LMO1-202ENST00000428101 CUL4BQ13620 913 aa29.24■■■□□ 2.27
LMO1-202ENST00000428101 TAF12Q16514 161 aa29.24■■■□□ 2.27
LMO1-202ENST00000428101 CCDC142Q17RM4 750 aa29.24■■■□□ 2.27
LMO1-202ENST00000428101 ZC3H14Q6PJT7 736 aaKnown RBP29.24■■■□□ 2.27
LMO1-202ENST00000428101 WDR49Q8IV35 697 aa29.24■■■□□ 2.27
LMO1-202ENST00000428101 ADGRF2Q8IZF7 708 aa29.24■■■□□ 2.27
LMO1-202ENST00000428101 RDH13Q8NBN7 331 aa29.24■■■□□ 2.27
LMO1-202ENST00000428101 STKLD1Q8NE28 680 aa29.24■■■□□ 2.27
LMO1-202ENST00000428101 HPDLQ96IR7 371 aa29.24■■■□□ 2.27
LMO1-202ENST00000428101 GTF3C4Q9UKN8 822 aa29.24■■■□□ 2.27
LMO1-202ENST00000428101 PVALEFA0A1B0GWK0 134 aa29.23■■■□□ 2.27
LMO1-202ENST00000428101 TNNC2P02585 160 aa29.23■■■□□ 2.27
LMO1-202ENST00000428101 F11P03951 625 aa29.23■■■□□ 2.27
LMO1-202ENST00000428101 CYP2F1P24903 491 aa29.23■■■□□ 2.27
LMO1-202ENST00000428101 AFMP43652 599 aa29.23■■■□□ 2.27
LMO1-202ENST00000428101 LHX1P48742 406 aa29.23■■■□□ 2.27
LMO1-202ENST00000428101 MLLT6P55198 1093 aaPredicted RBP29.23■■■□□ 2.27
LMO1-202ENST00000428101 CSTF1Q05048 431 aaKnown RBP29.23■■■□□ 2.27
LMO1-202ENST00000428101 MYO1EQ12965 1108 aa29.23■■■□□ 2.27
LMO1-202ENST00000428101 SNRNP35Q16560 246 aaKnown RBP29.23■■■□□ 2.27
LMO1-202ENST00000428101 SDHAF4Q5VUM1 108 aa29.23■■■□□ 2.27
LMO1-202ENST00000428101 GRAMD1CQ8IYS0 662 aa29.23■■■□□ 2.27
LMO1-202ENST00000428101 ABCB6Q9NP58 842 aa29.23■■■□□ 2.27
LMO1-202ENST00000428101 ZNF638Q14966 1978 aaKnown RBP29.22■■■□□ 2.27
LMO1-202ENST00000428101 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP29.22■■■□□ 2.27
LMO1-202ENST00000428101 DPYSL4O14531 572 aa29.22■■■□□ 2.27
LMO1-202ENST00000428101 NLRP12P59046 1061 aa29.22■■■□□ 2.27
LMO1-202ENST00000428101 SNRPFP62306 86 aaKnown RBP29.22■■■□□ 2.27
LMO1-202ENST00000428101 MTAPQ13126 283 aa29.22■■■□□ 2.27
LMO1-202ENST00000428101 BMT2Q1RMZ1 405 aa29.22■■■□□ 2.27
LMO1-202ENST00000428101 CSGALNACT1Q8TDX6 532 aa29.22■■■□□ 2.27
LMO1-202ENST00000428101 ZFYVE19Q96K21 471 aa29.22■■■□□ 2.27
LMO1-202ENST00000428101 GCNAQ96QF7 691 aa29.22■■■□□ 2.27
LMO1-202ENST00000428101 SLC39A2Q9NP94 309 aa29.22■■■□□ 2.27
LMO1-202ENST00000428101 MYBPHLA2RUH7 354 aa29.21■■■□□ 2.27
LMO1-202ENST00000428101 CCNE1P24864 410 aa29.21■■■□□ 2.27
LMO1-202ENST00000428101 CYP2J2P51589 502 aa29.21■■■□□ 2.27
LMO1-202ENST00000428101 DDR2Q16832 855 aa29.21■■■□□ 2.27
LMO1-202ENST00000428101 DPH6Q7L8W6 267 aa29.21■■■□□ 2.27
LMO1-202ENST00000428101 TRAPPC11Q7Z392 1133 aa29.21■■■□□ 2.27
LMO1-202ENST00000428101 KBTBD7Q8WVZ9 684 aa29.21■■■□□ 2.27
LMO1-202ENST00000428101 SMG9Q9H0W8 520 aaKnown RBP29.21■■■□□ 2.27
LMO1-202ENST00000428101 CHRDQ9H2X0 955 aa29.21■■■□□ 2.27
LMO1-202ENST00000428101 PRMT8Q9NR22 394 aaPredicted RBP29.21■■■□□ 2.27
LMO1-202ENST00000428101 SERTAD1Q9UHV2 236 aa29.21■■■□□ 2.27
LMO1-202ENST00000428101 R3HCC1Q9Y3T6 440 aaKnown RBP29.21■■■□□ 2.27
LMO1-202ENST00000428101 FRYLO94915 3013 aa29.2■■■□□ 2.27
LMO1-202ENST00000428101 SLC38A8A6NNN8 435 aa29.2■■■□□ 2.26
LMO1-202ENST00000428101 CSH1P0DML2 217 aa29.2■■■□□ 2.26
LMO1-202ENST00000428101 CSH2P0DML3 217 aa29.2■■■□□ 2.26
LMO1-202ENST00000428101 DLATP10515 647 aaKnown RBP29.2■■■□□ 2.26
LMO1-202ENST00000428101 LMO2P25791 158 aa29.2■■■□□ 2.26
LMO1-202ENST00000428101 PCSK1P29120 753 aa29.2■■■□□ 2.26
LMO1-202ENST00000428101 SOX9P48436 509 aa29.2■■■□□ 2.26
LMO1-202ENST00000428101 CYP24A1Q07973 514 aa29.2■■■□□ 2.26
LMO1-202ENST00000428101 PSMD6Q15008 389 aa29.2■■■□□ 2.26
LMO1-202ENST00000428101 ARHGAP29Q52LW3 1261 aa29.2■■■□□ 2.26
LMO1-202ENST00000428101 FAM171BQ6P995 826 aa29.2■■■□□ 2.26
LMO1-202ENST00000428101 CMTM8Q8IZV2 173 aa29.2■■■□□ 2.26
LMO1-202ENST00000428101 XXYLT1Q8NBI6 393 aa29.2■■■□□ 2.26
LMO1-202ENST00000428101 BPIFB1Q8TDL5 484 aa29.2■■■□□ 2.26
LMO1-202ENST00000428101 GZF1Q9H116 711 aaPredicted RBP29.2■■■□□ 2.26
LMO1-202ENST00000428101 LMAN1LQ9HAT1 526 aa29.2■■■□□ 2.26
LMO1-202ENST00000428101 KIF26AQ9ULI4 1882 aaPredicted RBP29.2■■■□□ 2.26
LMO1-202ENST00000428101 OTOGLQ3ZCN5 2332 aa29.2■■■□□ 2.26
LMO1-202ENST00000428101 SPTBN4Q9H254 2564 aa29.19■■■□□ 2.26
LMO1-202ENST00000428101 ACTN4O43707 911 aaKnown RBP29.19■■■□□ 2.26
LMO1-202ENST00000428101 KLRC4O43908 158 aa29.19■■■□□ 2.26
LMO1-202ENST00000428101 ATP2C2O75185 946 aa29.19■■■□□ 2.26
LMO1-202ENST00000428101 CST3P01034 146 aaPredicted RBP29.19■■■□□ 2.26
LMO1-202ENST00000428101 SLFN14P0C7P3 912 aa29.19■■■□□ 2.26
LMO1-202ENST00000428101 CHRNB1P11230 501 aa29.19■■■□□ 2.26
LMO1-202ENST00000428101 CFAP221Q4G0U5 840 aa29.19■■■□□ 2.26
LMO1-202ENST00000428101 TSSK4Q6SA08 328 aa29.19■■■□□ 2.26
LMO1-202ENST00000428101 HS2ST1Q7LGA3 356 aa29.19■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 165.5 ms