RNA–Protein interactions for RNA: ENST00000427563.1

COL9A2-204, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-204ENST00000427563 CRTAC1Q9NQ79 661 aa20.55■□□□□ 0.88
COL9A2-204ENST00000427563 PCDHB5Q9Y5E4 795 aa20.55■□□□□ 0.88
COL9A2-204ENST00000427563 PRPF40AO75400 957 aaKnown RBP20.54■□□□□ 0.88
COL9A2-204ENST00000427563 C4BPAP04003 597 aaKnown RBP20.54■□□□□ 0.88
COL9A2-204ENST00000427563 WARSP23381 471 aaKnown RBP20.54■□□□□ 0.88
COL9A2-204ENST00000427563 CYP2F1P24903 491 aa20.54■□□□□ 0.88
COL9A2-204ENST00000427563 LHX1P48742 406 aa20.54■□□□□ 0.88
COL9A2-204ENST00000427563 MYL7Q01449 175 aa20.54■□□□□ 0.88
COL9A2-204ENST00000427563 TSPY1Q01534 308 aa20.54■□□□□ 0.88
COL9A2-204ENST00000427563 GRM2Q14416 872 aa20.54■□□□□ 0.88
COL9A2-204ENST00000427563 ZCWPW2Q504Y3 356 aa20.54■□□□□ 0.88
COL9A2-204ENST00000427563 VITQ6UXI7 678 aa20.54■□□□□ 0.88
COL9A2-204ENST00000427563 SMYD4Q8IYR2 804 aaPredicted RBP20.54■□□□□ 0.88
COL9A2-204ENST00000427563 ZSCAN18Q8TBC5 510 aaPredicted RBP20.54■□□□□ 0.88
COL9A2-204ENST00000427563 ERCC4Q92889 916 aaPredicted RBP20.54■□□□□ 0.88
COL9A2-204ENST00000427563 SMARCD2Q92925 531 aa20.54■□□□□ 0.88
COL9A2-204ENST00000427563 TRPV4Q9HBA0 871 aa20.54■□□□□ 0.88
COL9A2-204ENST00000427563 CACNA1HO95180 2353 aa20.54■□□□□ 0.88
COL9A2-204ENST00000427563 KIF26AQ9ULI4 1882 aaPredicted RBP20.54■□□□□ 0.88
COL9A2-204ENST00000427563 MIA3Q5JRA6 1907 aa20.53■□□□□ 0.88
COL9A2-204ENST00000427563 ANAPC1Q9H1A4 1944 aa20.53■□□□□ 0.88
COL9A2-204ENST00000427563 GALR2O43603 387 aaPredicted RBP20.53■□□□□ 0.88
COL9A2-204ENST00000427563 STAU1O95793 577 aaKnown RBP20.53■□□□□ 0.88
COL9A2-204ENST00000427563 GABRR2P28476 465 aa20.53■□□□□ 0.88
COL9A2-204ENST00000427563 PSMC1P62191 440 aaKnown RBP20.53■□□□□ 0.88
COL9A2-204ENST00000427563 CYP4F8P98187 520 aa20.53■□□□□ 0.88
COL9A2-204ENST00000427563 GPIHBP1Q8IV16 184 aa20.53■□□□□ 0.88
COL9A2-204ENST00000427563 GUF1Q8N442 669 aaKnown RBP20.53■□□□□ 0.88
COL9A2-204ENST00000427563 LRRC3BQ96PB8 259 aa20.53■□□□□ 0.88
COL9A2-204ENST00000427563 ZFP14Q9HCL3 533 aa20.53■□□□□ 0.88
COL9A2-204ENST00000427563 LRRN2O75325 713 aa20.52■□□□□ 0.88
COL9A2-204ENST00000427563 STARD6P59095 220 aa20.52■□□□□ 0.88
COL9A2-204ENST00000427563 NFE2Q16621 373 aaPredicted RBP20.52■□□□□ 0.88
COL9A2-204ENST00000427563 NFIL3Q16649 462 aa20.52■□□□□ 0.88
COL9A2-204ENST00000427563 DDR2Q16832 855 aa20.52■□□□□ 0.88
COL9A2-204ENST00000427563 PHLDB3Q6NSJ2 640 aa20.52■□□□□ 0.88
COL9A2-204ENST00000427563 ITIH5Q86UX2 942 aa20.52■□□□□ 0.88
COL9A2-204ENST00000427563 IPO9Q96P70 1041 aaKnown RBP20.52■□□□□ 0.88
COL9A2-204ENST00000427563 SYT15Q9BQS2 421 aa20.52■□□□□ 0.88
COL9A2-204ENST00000427563 DDX23Q9BUQ8 820 aaKnown RBP20.52■□□□□ 0.88
COL9A2-204ENST00000427563 FOXQ1Q9C009 403 aa20.52■□□□□ 0.88
COL9A2-204ENST00000427563 ATXN3LQ9H3M9 355 aa20.52■□□□□ 0.88
COL9A2-204ENST00000427563 ABCB6Q9NP58 842 aa20.52■□□□□ 0.88
COL9A2-204ENST00000427563 DLGAP2Q9P1A6 1054 aa20.52■□□□□ 0.88
COL9A2-204ENST00000427563 MYO15AQ9UKN7 3530 aa20.52■□□□□ 0.87
COL9A2-204ENST00000427563 TACC1O75410 805 aa20.51■□□□□ 0.87
COL9A2-204ENST00000427563 TADA3O75528 432 aa20.51■□□□□ 0.87
COL9A2-204ENST00000427563 AKAP3O75969 853 aa20.51■□□□□ 0.87
COL9A2-204ENST00000427563 F11P03951 625 aa20.51■□□□□ 0.87
COL9A2-204ENST00000427563 PDGFRBP09619 1106 aa20.51■□□□□ 0.87
COL9A2-204ENST00000427563 GLULP15104 373 aa20.51■□□□□ 0.87
COL9A2-204ENST00000427563 PCSK1P29120 753 aa20.51■□□□□ 0.87
COL9A2-204ENST00000427563 WDR72Q3MJ13 1102 aa20.51■□□□□ 0.87
COL9A2-204ENST00000427563 SLC44A4Q53GD3 710 aa20.51■□□□□ 0.87
COL9A2-204ENST00000427563 CEP135Q66GS9 1140 aa20.51■□□□□ 0.87
COL9A2-204ENST00000427563 SPATA20Q8TB22 786 aa20.51■□□□□ 0.87
COL9A2-204ENST00000427563 FAM200AQ8TCP9 573 aa20.51■□□□□ 0.87
COL9A2-204ENST00000427563 MYLPFQ96A32 169 aa20.51■□□□□ 0.87
COL9A2-204ENST00000427563 MMS19Q96T76 1030 aa20.51■□□□□ 0.87
COL9A2-204ENST00000427563 SDCBP2Q9H190 292 aa20.51■□□□□ 0.87
COL9A2-204ENST00000427563 DPEP3Q9H4B8 488 aa20.51■□□□□ 0.87
COL9A2-204ENST00000427563 SMYD3Q9H7B4 428 aa20.51■□□□□ 0.87
COL9A2-204ENST00000427563 VRTNQ9H8Y1 702 aa20.51■□□□□ 0.87
COL9A2-204ENST00000427563 CDH9Q9ULB4 789 aa20.51■□□□□ 0.87
COL9A2-204ENST00000427563 R3HCC1Q9Y3T6 440 aaKnown RBP20.51■□□□□ 0.87
COL9A2-204ENST00000427563 MTF2Q9Y483 593 aaPredicted RBP20.51■□□□□ 0.87
COL9A2-204ENST00000427563 DMDP11532 3685 aa20.51■□□□□ 0.87
COL9A2-204ENST00000427563 ZNF638Q14966 1978 aaKnown RBP20.5■□□□□ 0.87
COL9A2-204ENST00000427563 HEPACAM2A8MVW5 462 aa20.5■□□□□ 0.87
COL9A2-204ENST00000427563 ARNTLO00327 626 aa20.5■□□□□ 0.87
COL9A2-204ENST00000427563 CALUO43852 315 aaPredicted RBP20.5■□□□□ 0.87
COL9A2-204ENST00000427563 PRAMEF12O95522 483 aa20.5■□□□□ 0.87
COL9A2-204ENST00000427563 HOXD11P31277 338 aaPredicted RBP20.5■□□□□ 0.87
COL9A2-204ENST00000427563 NUBP1P53384 320 aa20.5■□□□□ 0.87
COL9A2-204ENST00000427563 PTPN5P54829 565 aa20.5■□□□□ 0.87
COL9A2-204ENST00000427563 FAM160A1Q05DH4 1040 aa20.5■□□□□ 0.87
COL9A2-204ENST00000427563 VEPH1Q14D04 833 aa20.5■□□□□ 0.87
COL9A2-204ENST00000427563 MLF2Q15773 248 aaPredicted RBP20.5■□□□□ 0.87
COL9A2-204ENST00000427563 ZACNQ401N2 412 aa20.5■□□□□ 0.87
COL9A2-204ENST00000427563 CFAP221Q4G0U5 840 aa20.5■□□□□ 0.87
COL9A2-204ENST00000427563 GPR158Q5T848 1215 aa20.5■□□□□ 0.87
COL9A2-204ENST00000427563 ARID3BQ8IVW6 561 aaPredicted RBP20.5■□□□□ 0.87
COL9A2-204ENST00000427563 TMC2Q8TDI7 906 aa20.5■□□□□ 0.87
COL9A2-204ENST00000427563 CCDC47Q96A33 483 aaKnown RBP20.5■□□□□ 0.87
COL9A2-204ENST00000427563 PRRX2Q99811 253 aa20.5■□□□□ 0.87
COL9A2-204ENST00000427563 FAM86C1Q9NVL1 165 aa20.5■□□□□ 0.87
COL9A2-204ENST00000427563 H0Y858 1186 aa20.49■□□□□ 0.87
COL9A2-204ENST00000427563 GADD45BO75293 160 aaPredicted RBP20.49■□□□□ 0.87
COL9A2-204ENST00000427563 DCNP07585 359 aaKnown RBP20.49■□□□□ 0.87
COL9A2-204ENST00000427563 CD72P21854 359 aa20.49■□□□□ 0.87
COL9A2-204ENST00000427563 NR2F2P24468 414 aa20.49■□□□□ 0.87
COL9A2-204ENST00000427563 ATICP31939 592 aa20.49■□□□□ 0.87
COL9A2-204ENST00000427563 RAP1GAPP47736 663 aa20.49■□□□□ 0.87
COL9A2-204ENST00000427563 CDH8P55286 799 aa20.49■□□□□ 0.87
COL9A2-204ENST00000427563 NLRP12P59046 1061 aa20.49■□□□□ 0.87
COL9A2-204ENST00000427563 TRPC3Q13507 836 aa20.49■□□□□ 0.87
COL9A2-204ENST00000427563 NCOA4Q13772 614 aa20.49■□□□□ 0.87
COL9A2-204ENST00000427563 SV2AQ7L0J3 742 aa20.49■□□□□ 0.87
COL9A2-204ENST00000427563 CCDC105Q8IYK2 499 aa20.49■□□□□ 0.87
COL9A2-204ENST00000427563 FUBP3Q96I24 572 aaKnown RBP eCLIP20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms