RNA–Protein interactions for RNA: ENST00000427534.6

SPG11-202, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 6,935 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-202ENST00000427534 PATL1Q86TB9 770 aaKnown RBP13.74□□□□□ -0.21
SPG11-202ENST00000427534 ZC3H7BQ9UGR2 993 aaKnown RBP13.74□□□□□ -0.21
SPG11-202ENST00000427534 PTPRMP28827 1452 aa13.74□□□□□ -0.21
SPG11-202ENST00000427534 ANGPT2O15123 496 aa13.74□□□□□ -0.21
SPG11-202ENST00000427534 HAUS5O94927 633 aa13.74□□□□□ -0.21
SPG11-202ENST00000427534 PGS1Q32NB8 556 aa13.74□□□□□ -0.21
SPG11-202ENST00000427534 NCALDP61601 193 aa13.73□□□□□ -0.21
SPG11-202ENST00000427534 LPAR1Q92633 364 aa13.73□□□□□ -0.21
SPG11-202ENST00000427534 MED8Q96G25 268 aa13.73□□□□□ -0.21
SPG11-202ENST00000427534 TRIM62Q9BVG3 475 aa13.73□□□□□ -0.21
SPG11-202ENST00000427534 TRIM9Q9C026 710 aa13.73□□□□□ -0.21
SPG11-202ENST00000427534 CYP4F12Q9HCS2 524 aa13.73□□□□□ -0.21
SPG11-202ENST00000427534 SNX5Q9Y5X3 404 aa13.73□□□□□ -0.21
SPG11-202ENST00000427534 AIM2O14862 343 aa13.73□□□□□ -0.21
SPG11-202ENST00000427534 FDX1P10109 184 aa13.73□□□□□ -0.21
SPG11-202ENST00000427534 MYBL1P10243 752 aa13.73□□□□□ -0.21
SPG11-202ENST00000427534 GUCY1A3Q02108 690 aa13.73□□□□□ -0.21
SPG11-202ENST00000427534 GRIN1Q05586 938 aa13.73□□□□□ -0.21
SPG11-202ENST00000427534 PNMA5Q96PV4 448 aa13.73□□□□□ -0.21
SPG11-202ENST00000427534 CERS4Q9HA82 394 aa13.73□□□□□ -0.21
SPG11-202ENST00000427534 NFKBIL1Q9UBC1 381 aaPredicted RBP13.73□□□□□ -0.21
SPG11-202ENST00000427534 ASAP2O43150 1006 aa13.73□□□□□ -0.21
SPG11-202ENST00000427534 TRIM16O95361 564 aa13.73□□□□□ -0.21
SPG11-202ENST00000427534 URODP06132 367 aa13.73□□□□□ -0.21
SPG11-202ENST00000427534 HSPA1AP0DMV8 641 aaKnown RBP13.73□□□□□ -0.21
SPG11-202ENST00000427534 HSPA1BP0DMV9 641 aaKnown RBP13.73□□□□□ -0.21
SPG11-202ENST00000427534 GALNT4Q8N4A0 578 aa13.73□□□□□ -0.21
SPG11-202ENST00000427534 ADAM32Q8TC27 787 aa13.73□□□□□ -0.21
SPG11-202ENST00000427534 NRBF2Q96F24 287 aa13.73□□□□□ -0.21
SPG11-202ENST00000427534 CCSER1Q9C0I3 900 aa13.73□□□□□ -0.21
SPG11-202ENST00000427534 RNF208Q9H0X6 261 aa13.73□□□□□ -0.21
SPG11-202ENST00000427534 SCOCQ9UIL1 159 aa13.73□□□□□ -0.21
SPG11-202ENST00000427534 TCP11X1B4DZS4 312 aa13.73□□□□□ -0.21
SPG11-202ENST00000427534 NTSR2O95665 410 aa13.73□□□□□ -0.21
SPG11-202ENST00000427534 TPGS1Q6ZTW0 290 aa13.73□□□□□ -0.21
SPG11-202ENST00000427534 LRRC1Q9BTT6 524 aa13.73□□□□□ -0.21
SPG11-202ENST00000427534 COLEC11Q9BWP8 271 aa13.73□□□□□ -0.21
SPG11-202ENST00000427534 MYO3AQ8NEV4 1616 aa13.73□□□□□ -0.21
SPG11-202ENST00000427534 SLC12A8A0AV02 714 aa13.73□□□□□ -0.21
SPG11-202ENST00000427534 GPD1P21695 349 aa13.73□□□□□ -0.21
SPG11-202ENST00000427534 RFX5P48382 616 aaPredicted RBP13.73□□□□□ -0.21
SPG11-202ENST00000427534 STARD3Q14849 445 aa13.73□□□□□ -0.21
SPG11-202ENST00000427534 FRMD5Q7Z6J6 570 aa13.73□□□□□ -0.21
SPG11-202ENST00000427534 SCFD2Q8WU76 684 aa13.73□□□□□ -0.21
SPG11-202ENST00000427534 RSPH9Q9H1X1 276 aaPredicted RBP13.73□□□□□ -0.21
SPG11-202ENST00000427534 AAASQ9NRG9 546 aa13.73□□□□□ -0.21
SPG11-202ENST00000427534 NFIBO00712 420 aa13.72□□□□□ -0.21
SPG11-202ENST00000427534 GUCA1CO95843 209 aa13.72□□□□□ -0.21
SPG11-202ENST00000427534 CPA2P48052 419 aa13.72□□□□□ -0.21
SPG11-202ENST00000427534 FNTAP49354 379 aa13.72□□□□□ -0.21
SPG11-202ENST00000427534 ADARB2Q9NS39 739 aaKnown RBP13.72□□□□□ -0.21
SPG11-202ENST00000427534 GRID2IPA4D2P6 1211 aa13.72□□□□□ -0.21
SPG11-202ENST00000427534 PDXKO00764 312 aa13.72□□□□□ -0.21
SPG11-202ENST00000427534 GALCP54803 685 aa13.72□□□□□ -0.21
SPG11-202ENST00000427534 STK4Q13043 487 aa13.72□□□□□ -0.21
SPG11-202ENST00000427534 RGL4Q8IZJ4 473 aa13.72□□□□□ -0.21
SPG11-202ENST00000427534 SLC38A7Q9NVC3 462 aa13.72□□□□□ -0.21
SPG11-202ENST00000427534 VPS28Q9UK41 221 aa13.72□□□□□ -0.21
SPG11-202ENST00000427534 DLC1Q96QB1 1528 aa13.72□□□□□ -0.21
SPG11-202ENST00000427534 ZFXP17010 805 aaPredicted RBP13.72□□□□□ -0.21
SPG11-202ENST00000427534 RIN3Q8TB24 985 aa13.72□□□□□ -0.21
SPG11-202ENST00000427534 USE1Q9NZ43 259 aa13.72□□□□□ -0.21
SPG11-202ENST00000427534 EHD2Q9NZN4 543 aa13.72□□□□□ -0.21
SPG11-202ENST00000427534 RALBP11234 206 aa13.72□□□□□ -0.21
SPG11-202ENST00000427534 TAF6P49848 677 aa13.72□□□□□ -0.21
SPG11-202ENST00000427534 RSPH1Q8WYR4 309 aa13.72□□□□□ -0.21
SPG11-202ENST00000427534 CELF6Q96J87 481 aaKnown RBP13.72□□□□□ -0.21
SPG11-202ENST00000427534 A0A087WZ62 844 aa13.72□□□□□ -0.21
SPG11-202ENST00000427534 AKAP10O43572 662 aa13.72□□□□□ -0.21
SPG11-202ENST00000427534 HBP1O60381 514 aa13.72□□□□□ -0.21
SPG11-202ENST00000427534 DCTN3O75935 186 aa13.72□□□□□ -0.21
SPG11-202ENST00000427534 CCL23P55773 120 aa13.72□□□□□ -0.21
SPG11-202ENST00000427534 DPYDQ12882 1025 aa13.72□□□□□ -0.21
SPG11-202ENST00000427534 SH2D3CQ8N5H7 860 aa13.72□□□□□ -0.21
SPG11-202ENST00000427534 TMC2Q8TDI7 906 aa13.72□□□□□ -0.21
SPG11-202ENST00000427534 FDXACB1Q9BRP7 624 aaPredicted RBP13.72□□□□□ -0.21
SPG11-202ENST00000427534 CATSPERBQ9H7T0 1116 aa13.72□□□□□ -0.21
SPG11-202ENST00000427534 NEXMIFQ5QGS0 1516 aa13.72□□□□□ -0.21
SPG11-202ENST00000427534 SGPL1O95470 568 aa13.71□□□□□ -0.21
SPG11-202ENST00000427534 KLRC1P26715 233 aa13.71□□□□□ -0.21
SPG11-202ENST00000427534 LAMC2Q13753 1193 aa13.71□□□□□ -0.21
SPG11-202ENST00000427534 MIR1-1HGQ9H1L0 117 aa13.71□□□□□ -0.21
SPG11-202ENST00000427534 WWOXQ9NZC7 414 aa13.71□□□□□ -0.21
SPG11-202ENST00000427534 SLC25A27O95847 323 aa13.71□□□□□ -0.21
SPG11-202ENST00000427534 PDIA6Q15084 440 aa13.71□□□□□ -0.21
SPG11-202ENST00000427534 TUBB6Q9BUF5 446 aa13.71□□□□□ -0.21
SPG11-202ENST00000427534 ZCCHC17Q9NP64 241 aaKnown RBP13.71□□□□□ -0.21
SPG11-202ENST00000427534 HEATR9A2RTY3 570 aa13.71□□□□□ -0.21
SPG11-202ENST00000427534 CYTH3O43739 400 aa13.71□□□□□ -0.21
SPG11-202ENST00000427534 DNAJC8O75937 253 aaPredicted RBP13.71□□□□□ -0.21
SPG11-202ENST00000427534 ADGRF2Q8IZF7 708 aa13.71□□□□□ -0.21
SPG11-202ENST00000427534 ADSSL1Q8N142 457 aa13.71□□□□□ -0.21
SPG11-202ENST00000427534 APPL1Q9UKG1 709 aa13.71□□□□□ -0.21
SPG11-202ENST00000427534 CPS1P31327 1500 aa13.71□□□□□ -0.21
SPG11-202ENST00000427534 F5H5T6 163 aa13.71□□□□□ -0.21
SPG11-202ENST00000427534 ABCB1P08183 1280 aaPredicted RBP13.71□□□□□ -0.21
SPG11-202ENST00000427534 SCFD1Q8WVM8 642 aa13.71□□□□□ -0.21
SPG11-202ENST00000427534 ATXN3LQ9H3M9 355 aa13.71□□□□□ -0.21
SPG11-202ENST00000427534 LZTS1Q9Y250 596 aa13.71□□□□□ -0.21
SPG11-202ENST00000427534 GPR182O15218 404 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms