RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 FOXJ1Q92949 421 aa6.91□□□□□ -1.3
SDCBP-203ENST00000424270 USP13Q92995 863 aaPredicted RBP6.91□□□□□ -1.3
SDCBP-203ENST00000424270 PSMG2Q969U7 264 aa6.91□□□□□ -1.3
SDCBP-203ENST00000424270 ERLEC1Q96DZ1 483 aa6.91□□□□□ -1.3
SDCBP-203ENST00000424270 LPIN3Q9BQK8 851 aa6.91□□□□□ -1.3
SDCBP-203ENST00000424270 SLC46A2Q9BY10 475 aa6.91□□□□□ -1.3
SDCBP-203ENST00000424270 LRRC3Q9BY71 257 aa6.91□□□□□ -1.3
SDCBP-203ENST00000424270 DNAJC25Q9H1X3 360 aa6.91□□□□□ -1.3
SDCBP-203ENST00000424270 CXCL16Q9H2A7 254 aa6.91□□□□□ -1.3
SDCBP-203ENST00000424270 ZDHHC4Q9NPG8 344 aa6.91□□□□□ -1.3
SDCBP-203ENST00000424270 TOPORSQ9NS56 1045 aaPredicted RBP6.91□□□□□ -1.3
SDCBP-203ENST00000424270 TOR4AQ9NXH8 423 aa6.91□□□□□ -1.3
SDCBP-203ENST00000424270 ZMYM5Q9UJ78 669 aa6.91□□□□□ -1.3
SDCBP-203ENST00000424270 TBX20Q9UMR3 447 aa6.91□□□□□ -1.3
SDCBP-203ENST00000424270 CNTNAP5Q8WYK1 1306 aa6.91□□□□□ -1.3
SDCBP-203ENST00000424270 ATG2BQ96BY7 2078 aa6.91□□□□□ -1.3
SDCBP-203ENST00000424270 COL5A1P20908 1838 aaPredicted RBP6.9□□□□□ -1.3
SDCBP-203ENST00000424270 TEP1Q99973 2627 aaKnown RBP6.9□□□□□ -1.3
SDCBP-203ENST00000424270 TEX15Q9BXT5 2789 aa6.9□□□□□ -1.3
SDCBP-203ENST00000424270 A0A1B0GTW7 788 aa6.9□□□□□ -1.3
SDCBP-203ENST00000424270 SGK1O00141 431 aa6.9□□□□□ -1.3
SDCBP-203ENST00000424270 SH2B2O14492 632 aaPredicted RBP6.9□□□□□ -1.3
SDCBP-203ENST00000424270 BRINP1O60477 761 aa6.9□□□□□ -1.3
SDCBP-203ENST00000424270 ZNF217O75362 1048 aa6.9□□□□□ -1.3
SDCBP-203ENST00000424270 PSMD10O75832 226 aa6.9□□□□□ -1.3
SDCBP-203ENST00000424270 NFATC1O95644 943 aa6.9□□□□□ -1.3
SDCBP-203ENST00000424270 APODP05090 189 aa6.9□□□□□ -1.3
SDCBP-203ENST00000424270 CKMP06732 381 aa6.9□□□□□ -1.3
SDCBP-203ENST00000424270 NMT1P30419 496 aaKnown RBP6.9□□□□□ -1.3
SDCBP-203ENST00000424270 CIITAP33076 1130 aa6.9□□□□□ -1.3
SDCBP-203ENST00000424270 GRK6P43250 576 aa6.9□□□□□ -1.3
SDCBP-203ENST00000424270 CLDN6P56747 220 aa6.9□□□□□ -1.3
SDCBP-203ENST00000424270 OSTNP61366 133 aa6.9□□□□□ -1.3
SDCBP-203ENST00000424270 TARDBPQ13148 414 aaKnown RBP eCLIP6.9□□□□□ -1.3
SDCBP-203ENST00000424270 SERINC3Q13530 473 aa6.9□□□□□ -1.3
SDCBP-203ENST00000424270 SF3A1Q15459 793 aaKnown RBP6.9□□□□□ -1.3
SDCBP-203ENST00000424270 NAB2Q15742 525 aa6.9□□□□□ -1.3
SDCBP-203ENST00000424270 AMHR2Q16671 573 aa6.9□□□□□ -1.3
SDCBP-203ENST00000424270 RTN1Q16799 776 aa6.9□□□□□ -1.3
SDCBP-203ENST00000424270 HLA-BQ31612 363 aa6.9□□□□□ -1.3
SDCBP-203ENST00000424270 DCAF4L1Q3SXM0 396 aa6.9□□□□□ -1.3
SDCBP-203ENST00000424270 PKDCCQ504Y2 493 aa6.9□□□□□ -1.3
SDCBP-203ENST00000424270 C20orf194Q5TEA3 1177 aa6.9□□□□□ -1.3
SDCBP-203ENST00000424270 MAEAQ7L5Y9 396 aa6.9□□□□□ -1.3
SDCBP-203ENST00000424270 EFCAB13Q8IY85 973 aa6.9□□□□□ -1.3
SDCBP-203ENST00000424270 ZNF248Q8NDW4 579 aa6.9□□□□□ -1.3
SDCBP-203ENST00000424270 GIPC2Q8TF65 315 aa6.9□□□□□ -1.3
SDCBP-203ENST00000424270 OSCP1Q8WVF1 389 aa6.9□□□□□ -1.3
SDCBP-203ENST00000424270 DDX12PQ92771 950 aa6.9□□□□□ -1.3
SDCBP-203ENST00000424270 LENG9Q96B70 501 aa6.9□□□□□ -1.3
SDCBP-203ENST00000424270 TMEM87BQ96K49 555 aa6.9□□□□□ -1.3
SDCBP-203ENST00000424270 PPP1R10Q96QC0 940 aaKnown RBP6.9□□□□□ -1.3
SDCBP-203ENST00000424270 ARHGAP9Q9BRR9 750 aa6.9□□□□□ -1.3
SDCBP-203ENST00000424270 LXNQ9BS40 222 aa6.9□□□□□ -1.3
SDCBP-203ENST00000424270 POLR3FQ9H1D9 316 aaPredicted RBP6.9□□□□□ -1.3
SDCBP-203ENST00000424270 PDZD7Q9H5P4 517 aa6.9□□□□□ -1.3
SDCBP-203ENST00000424270 CALCOCO1Q9P1Z2 691 aa6.9□□□□□ -1.3
SDCBP-203ENST00000424270 MAGED2Q9UNF1 606 aaPredicted RBP6.9□□□□□ -1.3
SDCBP-203ENST00000424270 FNDC3AQ9Y2H6 1198 aaKnown RBP6.9□□□□□ -1.3
SDCBP-203ENST00000424270 TIMM13Q9Y5L4 95 aaPredicted RBP6.9□□□□□ -1.3
SDCBP-203ENST00000424270 K7EQS6 105 aa6.89□□□□□ -1.31
SDCBP-203ENST00000424270 KLK10O43240 276 aa6.89□□□□□ -1.31
SDCBP-203ENST00000424270 P4HBP07237 508 aaKnown RBP6.89□□□□□ -1.31
SDCBP-203ENST00000424270 HNRNPLP14866 589 aaKnown RBP eCLIP6.89□□□□□ -1.31
SDCBP-203ENST00000424270 DDX6P26196 483 aaKnown RBP eCLIP6.89□□□□□ -1.31
SDCBP-203ENST00000424270 WEE1P30291 646 aa6.89□□□□□ -1.31
SDCBP-203ENST00000424270 HSPA4P34932 840 aa6.89□□□□□ -1.31
SDCBP-203ENST00000424270 PCBP4P57723 403 aaKnown RBP6.89□□□□□ -1.31
SDCBP-203ENST00000424270 AKAP17AQ02040 695 aaKnown RBP6.89□□□□□ -1.31
SDCBP-203ENST00000424270 KDSRQ06136 332 aa6.89□□□□□ -1.31
SDCBP-203ENST00000424270 MYO1EQ12965 1108 aa6.89□□□□□ -1.31
SDCBP-203ENST00000424270 TXNDC8Q6A555 127 aa6.89□□□□□ -1.31
SDCBP-203ENST00000424270 NCAPH2Q6IBW4 605 aa6.89□□□□□ -1.31
SDCBP-203ENST00000424270 SDE2Q6IQ49 451 aa6.89□□□□□ -1.31
SDCBP-203ENST00000424270 KIAA1324Q6UXG2 1013 aaKnown RBP6.89□□□□□ -1.31
SDCBP-203ENST00000424270 DSTYKQ6XUX3 929 aa6.89□□□□□ -1.31
SDCBP-203ENST00000424270 TRMT11Q7Z4G4 463 aaKnown RBP6.89□□□□□ -1.31
SDCBP-203ENST00000424270 SGMS1Q86VZ5 419 aa6.89□□□□□ -1.31
SDCBP-203ENST00000424270 SLC41A1Q8IVJ1 513 aa6.89□□□□□ -1.31
SDCBP-203ENST00000424270 TPH2Q8IWU9 490 aa6.89□□□□□ -1.31
SDCBP-203ENST00000424270 MB21D2Q8IYB1 491 aaPredicted RBP6.89□□□□□ -1.31
SDCBP-203ENST00000424270 IL17RCQ8NAC3 791 aa6.89□□□□□ -1.31
SDCBP-203ENST00000424270 ATAD1Q8NBU5 361 aa6.89□□□□□ -1.31
SDCBP-203ENST00000424270 KCNE4Q8WWG9 221 aa6.89□□□□□ -1.31
SDCBP-203ENST00000424270 CRYGNQ8WXF5 182 aa6.89□□□□□ -1.31
SDCBP-203ENST00000424270 SNX19Q92543 992 aa6.89□□□□□ -1.31
SDCBP-203ENST00000424270 PRIMPOLQ96LW4 560 aa6.89□□□□□ -1.31
SDCBP-203ENST00000424270 YTHDC1Q96MU7 727 aaKnown RBP6.89□□□□□ -1.31
SDCBP-203ENST00000424270 CCDC94Q9BW85 323 aaPredicted RBP6.89□□□□□ -1.31
SDCBP-203ENST00000424270 MFRPQ9BY79 579 aa6.89□□□□□ -1.31
SDCBP-203ENST00000424270 OXCT2Q9BYC2 517 aaPredicted RBP6.89□□□□□ -1.31
SDCBP-203ENST00000424270 LRRC2Q9BYS8 371 aa6.89□□□□□ -1.31
SDCBP-203ENST00000424270 LNPKQ9C0E8 428 aa6.89□□□□□ -1.31
SDCBP-203ENST00000424270 NRSN2Q9GZP1 204 aa6.89□□□□□ -1.31
SDCBP-203ENST00000424270 LRRC4CQ9HCJ2 640 aa6.89□□□□□ -1.31
SDCBP-203ENST00000424270 BTBD3Q9Y2F9 522 aa6.89□□□□□ -1.31
SDCBP-203ENST00000424270 PTPRBP23467 1997 aa6.89□□□□□ -1.31
SDCBP-203ENST00000424270 TSC2P49815 1807 aa6.88□□□□□ -1.31
SDCBP-203ENST00000424270 IGHV1OR15-9A0A0B4J2B8 117 aa6.88□□□□□ -1.31
SDCBP-203ENST00000424270 SMIM28A0A1B0GU29 152 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms