RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 GPS1Q13098 491 aa15.1■□□□□ 0.01
MSH5-206ENST00000423982 HHATQ5VTY9 493 aa15.1■□□□□ 0.01
MSH5-206ENST00000423982 TMEM154Q6P9G4 183 aa15.1■□□□□ 0.01
MSH5-206ENST00000423982 KCTD17Q8N5Z5 321 aa15.1■□□□□ 0.01
MSH5-206ENST00000423982 DNAJC9Q8WXX5 260 aa15.1■□□□□ 0.01
MSH5-206ENST00000423982 KIFAP3Q92845 792 aa15.1■□□□□ 0.01
MSH5-206ENST00000423982 VTI1AQ96AJ9 217 aa15.1■□□□□ 0.01
MSH5-206ENST00000423982 NMRK1Q9NWW6 199 aa15.1■□□□□ 0.01
MSH5-206ENST00000423982 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.1■□□□□ 0.01
MSH5-206ENST00000423982 DCTN3O75935 186 aa15.1■□□□□ 0.01
MSH5-206ENST00000423982 RFC5P40937 340 aa15.1■□□□□ 0.01
MSH5-206ENST00000423982 PIK3CAP42336 1068 aa15.1■□□□□ 0.01
MSH5-206ENST00000423982 GPC3P51654 580 aa15.1■□□□□ 0.01
MSH5-206ENST00000423982 MXRA7P84157 204 aa15.1■□□□□ 0.01
MSH5-206ENST00000423982 CENPCQ03188 943 aa15.1■□□□□ 0.01
MSH5-206ENST00000423982 CTC1Q2NKJ3 1217 aa15.1■□□□□ 0.01
MSH5-206ENST00000423982 RNF220Q5VTB9 566 aa15.1■□□□□ 0.01
MSH5-206ENST00000423982 SLC39A4Q6P5W5 647 aa15.1■□□□□ 0.01
MSH5-206ENST00000423982 RFX8Q6ZV50 586 aa15.1■□□□□ 0.01
MSH5-206ENST00000423982 EEPD1Q7L9B9 569 aa15.1■□□□□ 0.01
MSH5-206ENST00000423982 RASAL3Q86YV0 1011 aa15.1■□□□□ 0.01
MSH5-206ENST00000423982 C12orf56Q8IXR9 622 aa15.1■□□□□ 0.01
MSH5-206ENST00000423982 DTX3LQ8TDB6 740 aa15.1■□□□□ 0.01
MSH5-206ENST00000423982 NRG4Q8WWG1 115 aa15.1■□□□□ 0.01
MSH5-206ENST00000423982 CFAP57Q96MR6 1250 aa15.1■□□□□ 0.01
MSH5-206ENST00000423982 CADM1Q9BY67 442 aaKnown RBP15.1■□□□□ 0.01
MSH5-206ENST00000423982 TMEM8AQ9HCN3 771 aa15.1■□□□□ 0.01
MSH5-206ENST00000423982 ZNF148Q9UQR1 794 aa15.1■□□□□ 0.01
MSH5-206ENST00000423982 PRPF4O43172 522 aaKnown RBP eCLIP15.09■□□□□ 0.01
MSH5-206ENST00000423982 TYROBPO43914 113 aa15.09■□□□□ 0.01
MSH5-206ENST00000423982 KRT36O76013 467 aa15.09■□□□□ 0.01
MSH5-206ENST00000423982 PROSCO94903 275 aa15.09■□□□□ 0.01
MSH5-206ENST00000423982 MUTP22033 750 aa15.09■□□□□ 0.01
MSH5-206ENST00000423982 ALDH3A1P30838 453 aa15.09■□□□□ 0.01
MSH5-206ENST00000423982 MUM1Q2TAK8 710 aa15.09■□□□□ 0.01
MSH5-206ENST00000423982 CLNKQ7Z7G1 428 aa15.09■□□□□ 0.01
MSH5-206ENST00000423982 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.09■□□□□ 0.01
MSH5-206ENST00000423982 ENDOVQ8N8Q3 282 aaKnown RBP15.09■□□□□ 0.01
MSH5-206ENST00000423982 PTPRN2Q92932 1015 aa15.09■□□□□ 0.01
MSH5-206ENST00000423982 ARL8BQ9NVJ2 186 aa15.09■□□□□ 0.01
MSH5-206ENST00000423982 A0A0G2JND7 137 aa15.09■□□□□ 0.01
MSH5-206ENST00000423982 CFAP69A5D8W1 941 aa15.09■□□□□ 0.01
MSH5-206ENST00000423982 ATP5HO75947 161 aa15.09■□□□□ 0.01
MSH5-206ENST00000423982 SSTR1P30872 391 aa15.09■□□□□ 0.01
MSH5-206ENST00000423982 MRPS9P82933 396 aaKnown RBP15.09■□□□□ 0.01
MSH5-206ENST00000423982 SARNPP82979 210 aaKnown RBP15.09■□□□□ 0.01
MSH5-206ENST00000423982 SP4Q02446 784 aa15.09■□□□□ 0.01
MSH5-206ENST00000423982 SCARA3Q6AZY7 606 aa15.09■□□□□ 0.01
MSH5-206ENST00000423982 TXNRD3NBQ6F5E7 133 aa15.09■□□□□ 0.01
MSH5-206ENST00000423982 CYLDQ9NQC7 956 aa15.09■□□□□ 0.01
MSH5-206ENST00000423982 PXMP2Q9NR77 195 aa15.09■□□□□ 0.01
MSH5-206ENST00000423982 FBXO6Q9NRD1 293 aaPredicted RBP15.09■□□□□ 0.01
MSH5-206ENST00000423982 DLGAP2Q9P1A6 1054 aa15.09■□□□□ 0.01
MSH5-206ENST00000423982 SAE1Q9UBE0 346 aaPredicted RBP15.09■□□□□ 0.01
MSH5-206ENST00000423982 DHX15O43143 795 aaKnown RBP15.08■□□□□ 0.01
MSH5-206ENST00000423982 SMIM24O75264 130 aa15.08■□□□□ 0.01
MSH5-206ENST00000423982 IFNB1P01574 187 aa15.08■□□□□ 0.01
MSH5-206ENST00000423982 GNAT1P11488 350 aa15.08■□□□□ 0.01
MSH5-206ENST00000423982 YWHABP31946 246 aaKnown RBP15.08■□□□□ 0.01
MSH5-206ENST00000423982 NSFP46459 744 aaKnown RBP15.08■□□□□ 0.01
MSH5-206ENST00000423982 OAZ1P54368 228 aa15.08■□□□□ 0.01
MSH5-206ENST00000423982 WNT7BP56706 349 aa15.08■□□□□ 0.01
MSH5-206ENST00000423982 RPL7AP62424 266 aaKnown RBP15.08■□□□□ 0.01
MSH5-206ENST00000423982 PDIA2Q13087 525 aaKnown RBP15.08■□□□□ 0.01
MSH5-206ENST00000423982 PGM5Q15124 567 aa15.08■□□□□ 0.01
MSH5-206ENST00000423982 RGMBQ6NW40 437 aa15.08■□□□□ 0.01
MSH5-206ENST00000423982 MAIP1Q8WWC4 291 aa15.08■□□□□ 0.01
MSH5-206ENST00000423982 MXRA8Q9BRK3 442 aa15.08■□□□□ 0.01
MSH5-206ENST00000423982 SLC17A7Q9P2U7 560 aa15.08■□□□□ 0.01
MSH5-206ENST00000423982 COQ4Q9Y3A0 265 aa15.08■□□□□ 0.01
MSH5-206ENST00000423982 DNALI1O14645 258 aaPredicted RBP15.08■□□□□ 0
MSH5-206ENST00000423982 P4HBP07237 508 aaKnown RBP15.08■□□□□ 0
MSH5-206ENST00000423982 PTPN4P29074 926 aa15.08■□□□□ 0
MSH5-206ENST00000423982 KPNB1Q14974 876 aaKnown RBP15.08■□□□□ 0
MSH5-206ENST00000423982 RCN1Q15293 331 aa15.08■□□□□ 0
MSH5-206ENST00000423982 MFSD7Q6UXD7 560 aa15.08■□□□□ 0
MSH5-206ENST00000423982 C4orf50Q6ZRC1 276 aa15.08■□□□□ 0
MSH5-206ENST00000423982 RELL1Q8IUW5 271 aa15.08■□□□□ 0
MSH5-206ENST00000423982 RHOT1Q8IXI2 618 aa15.08■□□□□ 0
MSH5-206ENST00000423982 LMNTD2Q8IXW0 634 aa15.08■□□□□ 0
MSH5-206ENST00000423982 SMC1BQ8NDV3 1235 aa15.08■□□□□ 0
MSH5-206ENST00000423982 BSNDQ8WZ55 320 aa15.08■□□□□ 0
MSH5-206ENST00000423982 ZNF516Q92618 1163 aa15.08■□□□□ 0
MSH5-206ENST00000423982 PDCD2LQ9BRP1 358 aa15.08■□□□□ 0
MSH5-206ENST00000423982 EHMT1Q9H9B1 1298 aa15.08■□□□□ 0
MSH5-206ENST00000423982 CPA4Q9UI42 421 aa15.08■□□□□ 0
MSH5-206ENST00000423982 TBX20Q9UMR3 447 aa15.08■□□□□ 0
MSH5-206ENST00000423982 LOC285556D6RIA3 1793 aa15.08■□□□□ 0
MSH5-206ENST00000423982 DENND3A2RUS2 1198 aa15.08■□□□□ 0
MSH5-206ENST00000423982 LIASO43766 372 aa15.08■□□□□ 0
MSH5-206ENST00000423982 ABHD2P08910 425 aa15.08■□□□□ 0
MSH5-206ENST00000423982 MARK3P27448 753 aa15.08■□□□□ 0
MSH5-206ENST00000423982 GPX6P59796 221 aa15.08■□□□□ 0
MSH5-206ENST00000423982 HTRA3P83110 453 aa15.08■□□□□ 0
MSH5-206ENST00000423982 MAMLD1Q13495 774 aa15.08■□□□□ 0
MSH5-206ENST00000423982 ACSBG2Q5FVE4 666 aa15.08■□□□□ 0
MSH5-206ENST00000423982 MON1BQ7L1V2 547 aa15.08■□□□□ 0
MSH5-206ENST00000423982 LRRC6Q86X45 466 aa15.08■□□□□ 0
MSH5-206ENST00000423982 TEX9Q8N6V9 391 aa15.08■□□□□ 0
MSH5-206ENST00000423982 TMEM121Q9BTD3 319 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms