RNA–Protein interactions for RNA: ENST00000423902.6

CHD7-201, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD7, Length 11,568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-201ENST00000423902 CSH1P0DML2 217 aa8.78□□□□□ -1
CHD7-201ENST00000423902 CSH2P0DML3 217 aa8.78□□□□□ -1
CHD7-201ENST00000423902 GPD1P21695 349 aa8.78□□□□□ -1
CHD7-201ENST00000423902 SAMD11Q96NU1 681 aa8.78□□□□□ -1
CHD7-201ENST00000423902 DYNC1I1O14576 645 aa8.78□□□□□ -1
CHD7-201ENST00000423902 HIST1H2AGP0C0S8 130 aaPredicted RBP8.78□□□□□ -1
CHD7-201ENST00000423902 HIST1H2ADP20671 130 aa8.78□□□□□ -1
CHD7-201ENST00000423902 ANKRD20A3Q5VUR7 823 aa8.78□□□□□ -1
CHD7-201ENST00000423902 SPOPLQ6IQ16 392 aa8.78□□□□□ -1
CHD7-201ENST00000423902 FMR1NBQ8N0W7 255 aaPredicted RBP8.78□□□□□ -1
CHD7-201ENST00000423902 HIST1H2AHQ96KK5 128 aa8.78□□□□□ -1
CHD7-201ENST00000423902 HIST1H2AJQ99878 128 aa8.78□□□□□ -1
CHD7-201ENST00000423902 H2AFJQ9BTM1 129 aa8.78□□□□□ -1
CHD7-201ENST00000423902 SUDS3Q9H7L9 328 aaPredicted RBP8.78□□□□□ -1
CHD7-201ENST00000423902 NCK2O43639 380 aa8.78□□□□□ -1
CHD7-201ENST00000423902 CD52P31358 61 aa8.78□□□□□ -1
CHD7-201ENST00000423902 FNDC3BQ53EP0 1204 aaKnown RBP8.78□□□□□ -1
CHD7-201ENST00000423902 RGL4Q8IZJ4 473 aa8.78□□□□□ -1
CHD7-201ENST00000423902 DCLK2Q8N568 766 aa8.78□□□□□ -1
CHD7-201ENST00000423902 C12orf42Q96LP6 360 aa8.78□□□□□ -1
CHD7-201ENST00000423902 UVRAGQ9P2Y5 699 aa8.78□□□□□ -1
CHD7-201ENST00000423902 RENBPP51606 427 aa8.78□□□□□ -1
CHD7-201ENST00000423902 MMEL1Q495T6 779 aa8.78□□□□□ -1
CHD7-201ENST00000423902 MIB1Q86YT6 1006 aa8.78□□□□□ -1
CHD7-201ENST00000423902 FBXL16Q8N461 479 aa8.78□□□□□ -1
CHD7-201ENST00000423902 MCUQ8NE86 351 aa8.78□□□□□ -1
CHD7-201ENST00000423902 SUSD6Q92537 303 aa8.78□□□□□ -1
CHD7-201ENST00000423902 TMEM60Q9H2L4 133 aa8.78□□□□□ -1
CHD7-201ENST00000423902 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.78□□□□□ -1
CHD7-201ENST00000423902 WEE1P30291 646 aa8.78□□□□□ -1
CHD7-201ENST00000423902 CAPN12Q6ZSI9 719 aa8.78□□□□□ -1
CHD7-201ENST00000423902 GPT2Q8TD30 523 aa8.78□□□□□ -1
CHD7-201ENST00000423902 RPRD1AQ96P16 312 aaPredicted RBP8.78□□□□□ -1
CHD7-201ENST00000423902 PDE11AQ9HCR9 933 aa8.78□□□□□ -1
CHD7-201ENST00000423902 PCDHB9Q9Y5E1 797 aa8.78□□□□□ -1
CHD7-201ENST00000423902 SCN9AQ15858 1988 aa8.78□□□□□ -1
CHD7-201ENST00000423902 SLC12A8A0AV02 714 aa8.78□□□□□ -1
CHD7-201ENST00000423902 ARHGAP10A1A4S6 786 aa8.78□□□□□ -1
CHD7-201ENST00000423902 GPC4O75487 556 aa8.78□□□□□ -1
CHD7-201ENST00000423902 RARRES1P49788 294 aa8.78□□□□□ -1
CHD7-201ENST00000423902 TSHZ1Q6ZSZ6 1077 aa8.78□□□□□ -1
CHD7-201ENST00000423902 CCDC121Q6ZUS5 278 aa8.78□□□□□ -1
CHD7-201ENST00000423902 ACOT1Q86TX2 421 aa8.78□□□□□ -1
CHD7-201ENST00000423902 RNF10Q8N5U6 811 aaKnown RBP8.78□□□□□ -1
CHD7-201ENST00000423902 TMEM176AQ96HP8 235 aa8.78□□□□□ -1
CHD7-201ENST00000423902 HPS5Q9UPZ3 1129 aa8.78□□□□□ -1
CHD7-201ENST00000423902 SBF2Q86WG5 1849 aa8.78□□□□□ -1
CHD7-201ENST00000423902 KNL1Q8NG31 2342 aa8.78□□□□□ -1
CHD7-201ENST00000423902 SLC10A3P09131 477 aa8.78□□□□□ -1
CHD7-201ENST00000423902 PTGER2P43116 358 aa8.78□□□□□ -1
CHD7-201ENST00000423902 BST2Q10589 180 aaKnown RBP8.78□□□□□ -1
CHD7-201ENST00000423902 GRIK5Q16478 980 aa8.78□□□□□ -1
CHD7-201ENST00000423902 VSTM4Q8IW00 320 aa8.78□□□□□ -1
CHD7-201ENST00000423902 RAPGEF5Q92565 580 aa8.78□□□□□ -1
CHD7-201ENST00000423902 OLFML3Q9NRN5 406 aa8.78□□□□□ -1
CHD7-201ENST00000423902 VPS28Q9UK41 221 aa8.78□□□□□ -1
CHD7-201ENST00000423902 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.78□□□□□ -1
CHD7-201ENST00000423902 ABHD14A-ACY1A0A1B0GW23 586 aa8.78□□□□□ -1
CHD7-201ENST00000423902 NDUFS3O75489 264 aa8.78□□□□□ -1
CHD7-201ENST00000423902 PCDH8O95206 1070 aa8.78□□□□□ -1
CHD7-201ENST00000423902 CXCL8P10145 99 aa8.78□□□□□ -1
CHD7-201ENST00000423902 RGS4P49798 205 aa8.78□□□□□ -1
CHD7-201ENST00000423902 ACLYP53396 1101 aa8.78□□□□□ -1
CHD7-201ENST00000423902 MDM2Q00987 491 aaPredicted RBP8.78□□□□□ -1
CHD7-201ENST00000423902 PTK2BQ14289 1009 aa8.78□□□□□ -1
CHD7-201ENST00000423902 SLMAPQ14BN4 828 aa8.78□□□□□ -1
CHD7-201ENST00000423902 TAF11Q15544 211 aa8.78□□□□□ -1
CHD7-201ENST00000423902 PID1Q7Z2X4 250 aa8.78□□□□□ -1
CHD7-201ENST00000423902 CPA6Q8N4T0 437 aa8.78□□□□□ -1
CHD7-201ENST00000423902 SHDQ96IW2 340 aa8.78□□□□□ -1
CHD7-201ENST00000423902 MCEEQ96PE7 176 aa8.78□□□□□ -1
CHD7-201ENST00000423902 GPR20Q99678 358 aa8.78□□□□□ -1
CHD7-201ENST00000423902 POC1B-GALNT4F8VUJ3 575 aa8.78□□□□□ -1
CHD7-201ENST00000423902 ZDHHC17Q8IUH5 632 aa8.78□□□□□ -1
CHD7-201ENST00000423902 STMN2Q93045 179 aa8.78□□□□□ -1
CHD7-201ENST00000423902 CORO1BQ9BR76 489 aa8.78□□□□□ -1
CHD7-201ENST00000423902 RSPH14Q9UHP6 348 aa8.78□□□□□ -1
CHD7-201ENST00000423902 Q9Y3F1 56 aa8.78□□□□□ -1
CHD7-201ENST00000423902 DOCK2Q92608 1830 aa8.78□□□□□ -1
CHD7-201ENST00000423902 MLH1P40692 756 aa8.77□□□□□ -1
CHD7-201ENST00000423902 RBM10P98175 930 aaKnown RBP8.77□□□□□ -1
CHD7-201ENST00000423902 SLC39A12Q504Y0 691 aa8.77□□□□□ -1
CHD7-201ENST00000423902 AHCYL2Q96HN2 611 aaKnown RBP8.77□□□□□ -1
CHD7-201ENST00000423902 HAUS8Q9BT25 410 aa8.77□□□□□ -1
CHD7-201ENST00000423902 ABCA3Q99758 1704 aa8.77□□□□□ -1
CHD7-201ENST00000423902 PSMC6P62333 389 aa8.77□□□□□ -1
CHD7-201ENST00000423902 POLR2LP62875 67 aaKnown RBP8.77□□□□□ -1
CHD7-201ENST00000423902 C4orf22Q6V702 233 aa8.77□□□□□ -1
CHD7-201ENST00000423902 ADGRE3Q9BY15 652 aa8.77□□□□□ -1
CHD7-201ENST00000423902 SLC30A1Q9Y6M5 507 aa8.77□□□□□ -1
CHD7-201ENST00000423902 NRAPQ86VF7 1730 aa8.77□□□□□ -1
CHD7-201ENST00000423902 MAP3K7CLP57077 242 aa8.77□□□□□ -1.01
CHD7-201ENST00000423902 LINC00523Q86TU6 105 aa8.77□□□□□ -1.01
CHD7-201ENST00000423902 KLRG2A4D1S0 409 aaPredicted RBP8.77□□□□□ -1.01
CHD7-201ENST00000423902 SPTLC1O15269 473 aa8.77□□□□□ -1.01
CHD7-201ENST00000423902 MED24O75448 989 aa8.77□□□□□ -1.01
CHD7-201ENST00000423902 HSPA1AP0DMV8 641 aaKnown RBP8.77□□□□□ -1.01
CHD7-201ENST00000423902 HSPA1BP0DMV9 641 aaKnown RBP8.77□□□□□ -1.01
CHD7-201ENST00000423902 STX2P32856 288 aa8.77□□□□□ -1.01
CHD7-201ENST00000423902 NSUN2Q08J23 767 aaKnown RBP eCLIP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms