RNA–Protein interactions for RNA: ENST00000423487.6

ABCA1-203, Transcript of ATP binding cassette subfamily A member 1, humanhuman

TSL 2 BASIC

Gene ABCA1, Length 1,540 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1-203ENST00000423487 DCP1BQ8IZD4 617 aaKnown RBP16.95■□□□□ 0.3
ABCA1-203ENST00000423487 VPS52Q8N1B4 723 aa16.95■□□□□ 0.3
ABCA1-203ENST00000423487 C12orf29Q8N999 325 aa16.95■□□□□ 0.3
ABCA1-203ENST00000423487 OR10T2Q8NGX3 314 aa16.95■□□□□ 0.3
ABCA1-203ENST00000423487 RIN2Q8WYP3 895 aaPredicted RBP16.95■□□□□ 0.3
ABCA1-203ENST00000423487 CYFIP2Q96F07 1278 aa16.95■□□□□ 0.3
ABCA1-203ENST00000423487 C11orf84Q9BUA3 381 aaPredicted RBP16.95■□□□□ 0.3
ABCA1-203ENST00000423487 SEPT11Q9NVA2 429 aaKnown RBP16.95■□□□□ 0.3
ABCA1-203ENST00000423487 ADAMTS1Q9UHI8 967 aa16.95■□□□□ 0.3
ABCA1-203ENST00000423487 PCDHGC3Q9UN70 934 aa16.95■□□□□ 0.3
ABCA1-203ENST00000423487 LZTS1Q9Y250 596 aa16.95■□□□□ 0.3
ABCA1-203ENST00000423487 SSX2IPQ9Y2D8 614 aa16.95■□□□□ 0.3
ABCA1-203ENST00000423487 O00370 1275 aa16.94■□□□□ 0.3
ABCA1-203ENST00000423487 ATP2C2O75185 946 aa16.94■□□□□ 0.3
ABCA1-203ENST00000423487 CHRNB2P17787 502 aa16.94■□□□□ 0.3
ABCA1-203ENST00000423487 PBX2P40425 430 aa16.94■□□□□ 0.3
ABCA1-203ENST00000423487 ERVK-21P61565 698 aa16.94■□□□□ 0.3
ABCA1-203ENST00000423487 FMO1Q01740 532 aa16.94■□□□□ 0.3
ABCA1-203ENST00000423487 UBE3AQ05086 875 aa16.94■□□□□ 0.3
ABCA1-203ENST00000423487 PSMD5Q16401 504 aa16.94■□□□□ 0.3
ABCA1-203ENST00000423487 ASTE1Q2TB18 679 aaPredicted RBP16.94■□□□□ 0.3
ABCA1-203ENST00000423487 MDH1BQ5I0G3 518 aa16.94■□□□□ 0.3
ABCA1-203ENST00000423487 KIAA0319Q5VV43 1072 aa16.94■□□□□ 0.3
ABCA1-203ENST00000423487 LCLAT1Q6UWP7 414 aa16.94■□□□□ 0.3
ABCA1-203ENST00000423487 RAD9BQ6WBX8 426 aa16.94■□□□□ 0.3
ABCA1-203ENST00000423487 TRIM72Q6ZMU5 477 aa16.94■□□□□ 0.3
ABCA1-203ENST00000423487 LNX1Q8TBB1 728 aaPredicted RBP16.94■□□□□ 0.3
ABCA1-203ENST00000423487 MYCBPAPQ8TBZ2 947 aa16.94■□□□□ 0.3
ABCA1-203ENST00000423487 ZSWIM1Q9BR11 485 aa16.94■□□□□ 0.3
ABCA1-203ENST00000423487 CRTAC1Q9NQ79 661 aa16.94■□□□□ 0.3
ABCA1-203ENST00000423487 FAM49BQ9NUQ9 324 aa16.94■□□□□ 0.3
ABCA1-203ENST00000423487 HESX1Q9UBX0 185 aa16.94■□□□□ 0.3
ABCA1-203ENST00000423487 CEP83Q9Y592 693 aa16.94■□□□□ 0.3
ABCA1-203ENST00000423487 BACE2Q9Y5Z0 518 aa16.94■□□□□ 0.3
ABCA1-203ENST00000423487 EPN1Q9Y6I3 576 aaPredicted RBP16.94■□□□□ 0.3
ABCA1-203ENST00000423487 MYBPHLA2RUH7 354 aa16.93■□□□□ 0.3
ABCA1-203ENST00000423487 ARHGEF15O94989 841 aa16.93■□□□□ 0.3
ABCA1-203ENST00000423487 NDUFA10O95299 355 aa16.93■□□□□ 0.3
ABCA1-203ENST00000423487 IPO7O95373 1038 aaKnown RBP16.93■□□□□ 0.3
ABCA1-203ENST00000423487 TAP1Q03518 808 aa16.93■□□□□ 0.3
ABCA1-203ENST00000423487 SLC18A3Q16572 532 aa16.93■□□□□ 0.3
ABCA1-203ENST00000423487 PPP1R26Q5T8A7 1209 aaPredicted RBP16.93■□□□□ 0.3
ABCA1-203ENST00000423487 FAM171BQ6P995 826 aa16.93■□□□□ 0.3
ABCA1-203ENST00000423487 PRSS55Q6UWB4 352 aaPredicted RBP16.93■□□□□ 0.3
ABCA1-203ENST00000423487 HNRNPABQ99729 332 aaKnown RBP16.93■□□□□ 0.3
ABCA1-203ENST00000423487 ZCWPW1Q9H0M4 648 aa16.93■□□□□ 0.3
ABCA1-203ENST00000423487 ZBP1Q9H171 429 aa16.93■□□□□ 0.3
ABCA1-203ENST00000423487 PRO3102Q9H379 93 aa16.93■□□□□ 0.3
ABCA1-203ENST00000423487 MRPL17Q9NRX2 175 aaKnown RBP16.93■□□□□ 0.3
ABCA1-203ENST00000423487 MTRRQ9UBK8 725 aa16.93■□□□□ 0.3
ABCA1-203ENST00000423487 GTF3C4Q9UKN8 822 aa16.93■□□□□ 0.3
ABCA1-203ENST00000423487 TSPAN16Q9UKR8 245 aa16.93■□□□□ 0.3
ABCA1-203ENST00000423487 MTUS1Q9ULD2 1270 aa16.93■□□□□ 0.3
ABCA1-203ENST00000423487 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.93■□□□□ 0.3
ABCA1-203ENST00000423487 TSC2P49815 1807 aa16.93■□□□□ 0.3
ABCA1-203ENST00000423487 A0A087X0T9 212 aa16.92■□□□□ 0.3
ABCA1-203ENST00000423487 EIF3CLB5ME19 914 aaKnown RBP16.92■□□□□ 0.3
ABCA1-203ENST00000423487 DDX3XO00571 662 aaKnown RBP eCLIP16.92■□□□□ 0.31e-9■■□□□ 13.1
ABCA1-203ENST00000423487 TBC1D4O60343 1298 aa16.92■□□□□ 0.3
ABCA1-203ENST00000423487 FAM228BP0C875 321 aa16.92■□□□□ 0.3
ABCA1-203ENST00000423487 CTSAP10619 480 aa16.92■□□□□ 0.3
ABCA1-203ENST00000423487 CREMQ03060 361 aa16.92■□□□□ 0.3
ABCA1-203ENST00000423487 MTF1Q14872 753 aa16.92■□□□□ 0.3
ABCA1-203ENST00000423487 SPA17Q15506 151 aa16.92■□□□□ 0.3
ABCA1-203ENST00000423487 NFE2Q16621 373 aaPredicted RBP16.92■□□□□ 0.3
ABCA1-203ENST00000423487 SLC30A5Q8TAD4 765 aa16.92■□□□□ 0.3
ABCA1-203ENST00000423487 SLC2A14Q8TDB8 520 aa16.92■□□□□ 0.3
ABCA1-203ENST00000423487 EIF3CQ99613 913 aaKnown RBP16.92■□□□□ 0.3
ABCA1-203ENST00000423487 PKMYT1Q99640 499 aa16.92■□□□□ 0.3
ABCA1-203ENST00000423487 LPIN3Q9BQK8 851 aa16.92■□□□□ 0.3
ABCA1-203ENST00000423487 LHX5Q9H2C1 402 aa16.92■□□□□ 0.3
ABCA1-203ENST00000423487 NKX2-4Q9H2Z4 354 aa16.92■□□□□ 0.3
ABCA1-203ENST00000423487 SLC28A3Q9HAS3 691 aa16.92■□□□□ 0.3
ABCA1-203ENST00000423487 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.92■□□□□ 0.3
ABCA1-203ENST00000423487 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.92■□□□□ 0.3
ABCA1-203ENST00000423487 KIAA1671Q9BY89 1806 aa16.92■□□□□ 0.3
ABCA1-203ENST00000423487 C2CD2LO14523 706 aa16.91■□□□□ 0.3
ABCA1-203ENST00000423487 MICAL2O94851 1124 aa16.91■□□□□ 0.3
ABCA1-203ENST00000423487 LSM8O95777 96 aaKnown RBP16.91■□□□□ 0.3
ABCA1-203ENST00000423487 GZMAP12544 262 aa16.91■□□□□ 0.3
ABCA1-203ENST00000423487 CCDC130P13994 396 aa16.91■□□□□ 0.3
ABCA1-203ENST00000423487 ADORA2BP29275 332 aa16.91■□□□□ 0.3
ABCA1-203ENST00000423487 SMAD3P84022 425 aaKnown RBP16.91■□□□□ 0.3
ABCA1-203ENST00000423487 GFPT1Q06210 699 aaPredicted RBP16.91■□□□□ 0.3
ABCA1-203ENST00000423487 SMARCB1Q12824 385 aa16.91■□□□□ 0.3
ABCA1-203ENST00000423487 GOLGA7BQ2TAP0 167 aa16.91■□□□□ 0.3
ABCA1-203ENST00000423487 PPP2R2DQ66LE6 453 aa16.91■□□□□ 0.3
ABCA1-203ENST00000423487 SLC8B1Q6J4K2 584 aa16.91■□□□□ 0.3
ABCA1-203ENST00000423487 PPP1R2P3Q6NXS1 205 aa16.91■□□□□ 0.3
ABCA1-203ENST00000423487 C4orf50Q6ZRC1 276 aa16.91■□□□□ 0.3
ABCA1-203ENST00000423487 LRRTM3Q86VH5 581 aa16.91■□□□□ 0.3
ABCA1-203ENST00000423487 FUKQ8N0W3 1084 aa16.91■□□□□ 0.3
ABCA1-203ENST00000423487 TMEM35BQ8NCS4 154 aa16.91■□□□□ 0.3
ABCA1-203ENST00000423487 FBXO22Q8NEZ5 403 aa16.91■□□□□ 0.3
ABCA1-203ENST00000423487 OLIG1Q8TAK6 271 aa16.91■□□□□ 0.3
ABCA1-203ENST00000423487 SPPL3Q8TCT6 385 aa16.91■□□□□ 0.3
ABCA1-203ENST00000423487 MYLPFQ96A32 169 aa16.91■□□□□ 0.3
ABCA1-203ENST00000423487 PCED1BQ96HM7 432 aa16.91■□□□□ 0.3
ABCA1-203ENST00000423487 TMEM209Q96SK2 561 aa16.91■□□□□ 0.3
ABCA1-203ENST00000423487 PCDHB18PQ96TA0 734 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms