RNA–Protein interactions for RNA: ENST00000421862.1

AC004540.1-203, humanhuman

TSL 5 BASIC

Gene AC004540.1, Length 907 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-203ENST00000421862 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.07■□□□□ 0.8
AC004540.1-203ENST00000421862 MORC2Q9Y6X9 1032 aaPredicted RBP20.07■□□□□ 0.8
AC004540.1-203ENST00000421862 MYMKA6NI61 221 aa20.06■□□□□ 0.8
AC004540.1-203ENST00000421862 TADA3O75528 432 aa20.06■□□□□ 0.8
AC004540.1-203ENST00000421862 CDR1P51861 262 aa20.06■□□□□ 0.8
AC004540.1-203ENST00000421862 CASP5P51878 434 aa20.06■□□□□ 0.8
AC004540.1-203ENST00000421862 SRSF5Q13243 272 aaKnown RBP20.06■□□□□ 0.8
AC004540.1-203ENST00000421862 TMEM196Q5HYL7 178 aa20.06■□□□□ 0.8
AC004540.1-203ENST00000421862 PDCL2Q8N4E4 241 aa20.06■□□□□ 0.8
AC004540.1-203ENST00000421862 LRRC52Q8N7C0 313 aa20.06■□□□□ 0.8
AC004540.1-203ENST00000421862 ZSWIM2Q8NEG5 633 aa20.06■□□□□ 0.8
AC004540.1-203ENST00000421862 SPATA18Q8TC71 538 aa20.06■□□□□ 0.8
AC004540.1-203ENST00000421862 NETO1Q8TDF5 533 aa20.06■□□□□ 0.8
AC004540.1-203ENST00000421862 USP13Q92995 863 aaPredicted RBP20.06■□□□□ 0.8
AC004540.1-203ENST00000421862 MRPL44Q9H9J2 332 aaKnown RBP20.06■□□□□ 0.8
AC004540.1-203ENST00000421862 UPF2Q9HAU5 1272 aaKnown RBP20.06■□□□□ 0.8
AC004540.1-203ENST00000421862 ABCB6Q9NP58 842 aa20.06■□□□□ 0.8
AC004540.1-203ENST00000421862 SEMA4GQ9NTN9 838 aa20.06■□□□□ 0.8
AC004540.1-203ENST00000421862 THG1LQ9NWX6 298 aaKnown RBP20.06■□□□□ 0.8
AC004540.1-203ENST00000421862 CCDC39Q9UFE4 941 aa20.06■□□□□ 0.8
AC004540.1-203ENST00000421862 L1RE1Q9UN81 338 aa20.06■□□□□ 0.8
AC004540.1-203ENST00000421862 EXOC7Q9UPT5 735 aa20.06■□□□□ 0.8
AC004540.1-203ENST00000421862 CCL26Q9Y258 94 aa20.06■□□□□ 0.8
AC004540.1-203ENST00000421862 CACNA1BQ00975 2339 aa20.05■□□□□ 0.8
AC004540.1-203ENST00000421862 ITGB3P05106 788 aa20.05■□□□□ 0.8
AC004540.1-203ENST00000421862 CSH1P0DML2 217 aa20.05■□□□□ 0.8
AC004540.1-203ENST00000421862 CSH2P0DML3 217 aa20.05■□□□□ 0.8
AC004540.1-203ENST00000421862 GARTP22102 1010 aa20.05■□□□□ 0.8
AC004540.1-203ENST00000421862 POLR2BP30876 1174 aaKnown RBP20.05■□□□□ 0.8
AC004540.1-203ENST00000421862 TSPY1Q01534 308 aa20.05■□□□□ 0.8
AC004540.1-203ENST00000421862 ZNF268Q14587 947 aaPredicted RBP20.05■□□□□ 0.8
AC004540.1-203ENST00000421862 CSRP2Q16527 193 aa20.05■□□□□ 0.8
AC004540.1-203ENST00000421862 NFE2Q16621 373 aaPredicted RBP20.05■□□□□ 0.8
AC004540.1-203ENST00000421862 PKN3Q6P5Z2 889 aa20.05■□□□□ 0.8
AC004540.1-203ENST00000421862 PRR23CQ6ZRP0 262 aa20.05■□□□□ 0.8
AC004540.1-203ENST00000421862 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.05■□□□□ 0.8
AC004540.1-203ENST00000421862 TRMT2BQ96GJ1 504 aaKnown RBP20.05■□□□□ 0.8
AC004540.1-203ENST00000421862 ACCSQ96QU6 501 aa20.05■□□□□ 0.8
AC004540.1-203ENST00000421862 ACBD6Q9BR61 282 aa20.05■□□□□ 0.8
AC004540.1-203ENST00000421862 FAM213AQ9BRX8 229 aa20.05■□□□□ 0.8
AC004540.1-203ENST00000421862 CCDC163A0A0D9SF12 145 aa20.04■□□□□ 0.8
AC004540.1-203ENST00000421862 VPS37CA5D8V6 355 aaPredicted RBP20.04■□□□□ 0.8
AC004540.1-203ENST00000421862 OTOL1A6NHN0 477 aaPredicted RBP20.04■□□□□ 0.8
AC004540.1-203ENST00000421862 SLC30A4O14863 429 aa20.04■□□□□ 0.8
AC004540.1-203ENST00000421862 NOL4O94818 638 aa20.04■□□□□ 0.8
AC004540.1-203ENST00000421862 HOXC13P31276 330 aa20.04■□□□□ 0.8
AC004540.1-203ENST00000421862 AVPR1AP37288 418 aa20.04■□□□□ 0.8
AC004540.1-203ENST00000421862 GPR15P49685 360 aa20.04■□□□□ 0.8
AC004540.1-203ENST00000421862 RESTQ13127 1097 aa20.04■□□□□ 0.8
AC004540.1-203ENST00000421862 ALCAMQ13740 583 aa20.04■□□□□ 0.8
AC004540.1-203ENST00000421862 RUNX3Q13761 415 aa20.04■□□□□ 0.8
AC004540.1-203ENST00000421862 TAF12Q16514 161 aa20.04■□□□□ 0.8
AC004540.1-203ENST00000421862 INTS6LQ5JSJ4 861 aaKnown RBP20.04■□□□□ 0.8
AC004540.1-203ENST00000421862 FSTL4Q6MZW2 842 aa20.04■□□□□ 0.8
AC004540.1-203ENST00000421862 TMEM86AQ8N2M4 240 aa20.04■□□□□ 0.8
AC004540.1-203ENST00000421862 MAB21L3Q8N8X9 362 aa20.04■□□□□ 0.8
AC004540.1-203ENST00000421862 STKLD1Q8NE28 680 aa20.04■□□□□ 0.8
AC004540.1-203ENST00000421862 SAAL1Q96ER3 474 aa20.04■□□□□ 0.8
AC004540.1-203ENST00000421862 MYRFLQ96LU7 910 aa20.04■□□□□ 0.8
AC004540.1-203ENST00000421862 FGFBP2Q9BYJ0 223 aa20.04■□□□□ 0.8
AC004540.1-203ENST00000421862 GKN1Q9NS71 199 aa20.04■□□□□ 0.8
AC004540.1-203ENST00000421862 TDP1Q9NUW8 608 aa20.04■□□□□ 0.8
AC004540.1-203ENST00000421862 GDAP2Q9NXN4 497 aa20.04■□□□□ 0.8
AC004540.1-203ENST00000421862 RBAKQ9NYW8 714 aaPredicted RBP20.04■□□□□ 0.8
AC004540.1-203ENST00000421862 ITGA11Q9UKX5 1188 aa20.04■□□□□ 0.8
AC004540.1-203ENST00000421862 TRDMT1O14717 391 aaKnown RBP20.03■□□□□ 0.8
AC004540.1-203ENST00000421862 GCNT3O95395 438 aa20.03■□□□□ 0.8
AC004540.1-203ENST00000421862 LDHAP00338 332 aaKnown RBP20.03■□□□□ 0.8
AC004540.1-203ENST00000421862 TFAMQ00059 246 aaKnown RBP20.03■□□□□ 0.8
AC004540.1-203ENST00000421862 CFAP221Q4G0U5 840 aa20.03■□□□□ 0.8
AC004540.1-203ENST00000421862 RRAGBQ5VZM2 374 aa20.03■□□□□ 0.8
AC004540.1-203ENST00000421862 HEATR6Q6AI08 1181 aaKnown RBP20.03■□□□□ 0.8
AC004540.1-203ENST00000421862 SV2BQ7L1I2 683 aa20.03■□□□□ 0.8
AC004540.1-203ENST00000421862 MON1AQ86VX9 555 aa20.03■□□□□ 0.8
AC004540.1-203ENST00000421862 FAM160A2Q8N612 972 aaPredicted RBP20.03■□□□□ 0.8
AC004540.1-203ENST00000421862 PI4K2AQ9BTU6 479 aa20.03■□□□□ 0.8
AC004540.1-203ENST00000421862 DDX43Q9NXZ2 648 aaKnown RBP20.03■□□□□ 0.8
AC004540.1-203ENST00000421862 AGAP1Q9UPQ3 857 aa20.03■□□□□ 0.8
AC004540.1-203ENST00000421862 DCDC2BA2VCK2 349 aa20.02■□□□□ 0.8
AC004540.1-203ENST00000421862 GABRDO14764 452 aa20.02■□□□□ 0.8
AC004540.1-203ENST00000421862 EXTL3O43909 919 aa20.02■□□□□ 0.8
AC004540.1-203ENST00000421862 FOXD2O60548 495 aaPredicted RBP20.02■□□□□ 0.8
AC004540.1-203ENST00000421862 PRPF40AO75400 957 aaKnown RBP20.02■□□□□ 0.8
AC004540.1-203ENST00000421862 PDCP20941 246 aa20.02■□□□□ 0.8
AC004540.1-203ENST00000421862 TXLNAP40222 546 aa20.02■□□□□ 0.8
AC004540.1-203ENST00000421862 BFSP1Q12934 665 aa20.02■□□□□ 0.8
AC004540.1-203ENST00000421862 USP4Q13107 963 aa20.02■□□□□ 0.8
AC004540.1-203ENST00000421862 TXNDC8Q6A555 127 aa20.02■□□□□ 0.8
AC004540.1-203ENST00000421862 SCARA3Q6AZY7 606 aa20.02■□□□□ 0.8
AC004540.1-203ENST00000421862 TRIM68Q6AZZ1 485 aa20.02■□□□□ 0.8
AC004540.1-203ENST00000421862 OSTM1Q86WC4 334 aa20.02■□□□□ 0.8
AC004540.1-203ENST00000421862 MRPS31Q92665 395 aaKnown RBP20.02■□□□□ 0.8
AC004540.1-203ENST00000421862 CLIC6Q96NY7 704 aa20.02■□□□□ 0.8
AC004540.1-203ENST00000421862 CBWD1Q9BRT8 395 aa20.02■□□□□ 0.8
AC004540.1-203ENST00000421862 EBF3Q9H4W6 596 aa20.02■□□□□ 0.8
AC004540.1-203ENST00000421862 TBC1D7Q9P0N9 293 aa20.02■□□□□ 0.8
AC004540.1-203ENST00000421862 UXTQ9UBK9 157 aaPredicted RBP20.02■□□□□ 0.8
AC004540.1-203ENST00000421862 SIX4Q9UIU6 781 aa20.02■□□□□ 0.8
AC004540.1-203ENST00000421862 PCDHB13Q9Y5F0 798 aa20.02■□□□□ 0.8
AC004540.1-203ENST00000421862 NUP205Q92621 2012 aa20.02■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms