RNA–Protein interactions for RNA: ENST00000421263.1

VARS2-202, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 460 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-202ENST00000421263 ZFYVE19Q96K21 471 aa20.33■□□□□ 0.85
VARS2-202ENST00000421263 FAM84AQ96KN4 292 aa20.33■□□□□ 0.85
VARS2-202ENST00000421263 PI4K2AQ9BTU6 479 aa20.33■□□□□ 0.85
VARS2-202ENST00000421263 TRIM9Q9C026 710 aa20.33■□□□□ 0.85
VARS2-202ENST00000421263 INTS13Q9NVM9 706 aa20.33■□□□□ 0.85
VARS2-202ENST00000421263 DDX43Q9NXZ2 648 aaKnown RBP20.33■□□□□ 0.85
VARS2-202ENST00000421263 GTSE1Q9NYZ3 720 aa20.33■□□□□ 0.85
VARS2-202ENST00000421263 DENND4CQ5VZ89 1909 aa20.33■□□□□ 0.84
VARS2-202ENST00000421263 SPECC1L-ADORA2AF8WAN1 911 aa20.32■□□□□ 0.84
VARS2-202ENST00000421263 YEATS4O95619 227 aa20.32■□□□□ 0.84
VARS2-202ENST00000421263 CTHP32929 405 aa20.32■□□□□ 0.84
VARS2-202ENST00000421263 CCR3P51677 355 aa20.32■□□□□ 0.84
VARS2-202ENST00000421263 KPNA1P52294 538 aaPredicted RBP20.32■□□□□ 0.84
VARS2-202ENST00000421263 NRLP54845 237 aa20.32■□□□□ 0.84
VARS2-202ENST00000421263 NLRP12P59046 1061 aa20.32■□□□□ 0.84
VARS2-202ENST00000421263 PLCB2Q00722 1185 aa20.32■□□□□ 0.84
VARS2-202ENST00000421263 INTS6LQ5JSJ4 861 aaKnown RBP20.32■□□□□ 0.84
VARS2-202ENST00000421263 EPM2AIP1Q7L775 607 aaPredicted RBP20.32■□□□□ 0.84
VARS2-202ENST00000421263 DPH6Q7L8W6 267 aa20.32■□□□□ 0.84
VARS2-202ENST00000421263 SPEM1Q8N4L4 309 aa20.32■□□□□ 0.84
VARS2-202ENST00000421263 TOP6BLQ8N6T0 577 aa20.32■□□□□ 0.84
VARS2-202ENST00000421263 CELF5Q8N6W0 485 aaKnown RBP20.32■□□□□ 0.84
VARS2-202ENST00000421263 ZNF507Q8TCN5 953 aa20.32■□□□□ 0.84
VARS2-202ENST00000421263 SNX21Q969T3 373 aa20.32■□□□□ 0.84
VARS2-202ENST00000421263 RMDN1Q96DB5 314 aa20.32■□□□□ 0.84
VARS2-202ENST00000421263 ZNF396Q96N95 335 aaPredicted RBP20.32■□□□□ 0.84
VARS2-202ENST00000421263 GCNAQ96QF7 691 aa20.32■□□□□ 0.84
VARS2-202ENST00000421263 ABCB6Q9NP58 842 aa20.32■□□□□ 0.84
VARS2-202ENST00000421263 ZNF233A6NK53 670 aa20.31■□□□□ 0.84
VARS2-202ENST00000421263 CUTAO60888 179 aa20.31■□□□□ 0.84
VARS2-202ENST00000421263 PRPF40AO75400 957 aaKnown RBP20.31■□□□□ 0.84
VARS2-202ENST00000421263 CSH1P0DML2 217 aa20.31■□□□□ 0.84
VARS2-202ENST00000421263 CSH2P0DML3 217 aa20.31■□□□□ 0.84
VARS2-202ENST00000421263 DDX6P26196 483 aaKnown RBP eCLIP20.31■□□□□ 0.84
VARS2-202ENST00000421263 CXCL12P48061 93 aa20.31■□□□□ 0.84
VARS2-202ENST00000421263 GPR15P49685 360 aa20.31■□□□□ 0.84
VARS2-202ENST00000421263 MYL7Q01449 175 aa20.31■□□□□ 0.84
VARS2-202ENST00000421263 PPP2R5DQ14738 602 aa20.31■□□□□ 0.84
VARS2-202ENST00000421263 SURF1Q15526 300 aa20.31■□□□□ 0.84
VARS2-202ENST00000421263 SOWAHAQ2M3V2 549 aa20.31■□□□□ 0.84
VARS2-202ENST00000421263 DGKKQ5KSL6 1271 aa20.31■□□□□ 0.84
VARS2-202ENST00000421263 SHC4Q6S5L8 630 aa20.31■□□□□ 0.84
VARS2-202ENST00000421263 STXBP4Q6ZWJ1 553 aa20.31■□□□□ 0.84
VARS2-202ENST00000421263 OSTM1Q86WC4 334 aa20.31■□□□□ 0.84
VARS2-202ENST00000421263 HPS3Q969F9 1004 aa20.31■□□□□ 0.84
VARS2-202ENST00000421263 FAM83CQ9BQN1 747 aa20.31■□□□□ 0.84
VARS2-202ENST00000421263 MTMR12Q9C0I1 747 aa20.31■□□□□ 0.84
VARS2-202ENST00000421263 GTF3C4Q9UKN8 822 aa20.31■□□□□ 0.84
VARS2-202ENST00000421263 SNX9Q9Y5X1 595 aa20.31■□□□□ 0.84
VARS2-202ENST00000421263 PTPRJQ12913 1337 aa20.3■□□□□ 0.84
VARS2-202ENST00000421263 EIF3DO15371 548 aaKnown RBP eCLIP20.3■□□□□ 0.84
VARS2-202ENST00000421263 PAPSS2O95340 614 aaPredicted RBP20.3■□□□□ 0.84
VARS2-202ENST00000421263 KRT19P08727 400 aa20.3■□□□□ 0.84
VARS2-202ENST00000421263 TMEM191BP0C7N4 346 aa20.3■□□□□ 0.84
VARS2-202ENST00000421263 ACAT1P24752 427 aaKnown RBP20.3■□□□□ 0.84
VARS2-202ENST00000421263 CYP2F1P24903 491 aa20.3■□□□□ 0.84
VARS2-202ENST00000421263 LHX1P48742 406 aa20.3■□□□□ 0.84
VARS2-202ENST00000421263 AMPD3Q01432 767 aa20.3■□□□□ 0.84
VARS2-202ENST00000421263 SATB1Q01826 763 aa20.3■□□□□ 0.84
VARS2-202ENST00000421263 BFSP1Q12934 665 aa20.3■□□□□ 0.84
VARS2-202ENST00000421263 LRRC32Q14392 662 aa20.3■□□□□ 0.84
VARS2-202ENST00000421263 CFAP221Q4G0U5 840 aa20.3■□□□□ 0.84
VARS2-202ENST00000421263 FAM171BQ6P995 826 aa20.3■□□□□ 0.84
VARS2-202ENST00000421263 MON1AQ86VX9 555 aa20.3■□□□□ 0.84
VARS2-202ENST00000421263 IQUBQ8NA54 791 aa20.3■□□□□ 0.84
VARS2-202ENST00000421263 OR5B17Q8NGF7 314 aa20.3■□□□□ 0.84
VARS2-202ENST00000421263 ANKRD36BP1Q96IX9 119 aa20.3■□□□□ 0.84
VARS2-202ENST00000421263 MYRFLQ96LU7 910 aa20.3■□□□□ 0.84
VARS2-202ENST00000421263 C7orf25Q9BPX7 421 aa20.3■□□□□ 0.84
VARS2-202ENST00000421263 HINFPQ9BQA5 517 aa20.3■□□□□ 0.84
VARS2-202ENST00000421263 SMG9Q9H0W8 520 aaKnown RBP20.3■□□□□ 0.84
VARS2-202ENST00000421263 KIAA1586Q9HCI6 787 aa20.3■□□□□ 0.84
VARS2-202ENST00000421263 RBM12Q9NTZ6 932 aaKnown RBP20.3■□□□□ 0.84
VARS2-202ENST00000421263 THG1LQ9NWX6 298 aaKnown RBP20.3■□□□□ 0.84
VARS2-202ENST00000421263 HSPBP1Q9NZL4 362 aa20.3■□□□□ 0.84
VARS2-202ENST00000421263 DNAH14Q0VDD8 3507 aa20.29■□□□□ 0.84
VARS2-202ENST00000421263 KIF26AQ9ULI4 1882 aaPredicted RBP20.29■□□□□ 0.84
VARS2-202ENST00000421263 NOL4O94818 638 aa20.29■□□□□ 0.84
VARS2-202ENST00000421263 PDIA4P13667 645 aaKnown RBP20.29■□□□□ 0.84
VARS2-202ENST00000421263 RPL10AP62906 217 aaKnown RBP20.29■□□□□ 0.84
VARS2-202ENST00000421263 TNK2Q07912 1038 aa20.29■□□□□ 0.84
VARS2-202ENST00000421263 EHHADHQ08426 723 aa20.29■□□□□ 0.84
VARS2-202ENST00000421263 CCINQ13939 588 aa20.29■□□□□ 0.84
VARS2-202ENST00000421263 DDR2Q16832 855 aa20.29■□□□□ 0.84
VARS2-202ENST00000421263 DUOXA2Q1HG44 320 aa20.29■□□□□ 0.84
VARS2-202ENST00000421263 ITPRIPL2Q3MIP1 535 aa20.29■□□□□ 0.84
VARS2-202ENST00000421263 LMBRD2Q68DH5 695 aaPredicted RBP20.29■□□□□ 0.84
VARS2-202ENST00000421263 TXNDC8Q6A555 127 aa20.29■□□□□ 0.84
VARS2-202ENST00000421263 CBWD2Q8IUF1 395 aa20.29■□□□□ 0.84
VARS2-202ENST00000421263 SYNPOQ8N3V7 929 aa20.29■□□□□ 0.84
VARS2-202ENST00000421263 GPR161Q8N6U8 529 aaKnown RBP20.29■□□□□ 0.84
VARS2-202ENST00000421263 MAB21L3Q8N8X9 362 aa20.29■□□□□ 0.84
VARS2-202ENST00000421263 TTC8Q8TAM2 541 aa20.29■□□□□ 0.84
VARS2-202ENST00000421263 USP13Q92995 863 aaPredicted RBP20.29■□□□□ 0.84
VARS2-202ENST00000421263 TRMT2BQ96GJ1 504 aaKnown RBP20.29■□□□□ 0.84
VARS2-202ENST00000421263 FUBP3Q96I24 572 aaKnown RBP eCLIP20.29■□□□□ 0.84
VARS2-202ENST00000421263 GKN1Q9NS71 199 aa20.29■□□□□ 0.84
VARS2-202ENST00000421263 SMG5Q9UPR3 1016 aaKnown RBP20.29■□□□□ 0.84
VARS2-202ENST00000421263 CCL26Q9Y258 94 aa20.29■□□□□ 0.84
VARS2-202ENST00000421263 CACNA1AO00555 2505 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms