RNA–Protein interactions for RNA: ENST00000420166.5

HMGXB4-203, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 1,257 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-203ENST00000420166 DUSP4Q13115 394 aa22.03■■□□□ 1.12
HMGXB4-203ENST00000420166 CBX2Q14781 532 aaPredicted RBP22.03■■□□□ 1.12
HMGXB4-203ENST00000420166 NCAPHQ15003 741 aa22.03■■□□□ 1.12
HMGXB4-203ENST00000420166 SMAD2Q15796 467 aaKnown RBP22.03■■□□□ 1.12
HMGXB4-203ENST00000420166 FAM171BQ6P995 826 aa22.03■■□□□ 1.12
HMGXB4-203ENST00000420166 RIPOR3Q96MK2 946 aa22.03■■□□□ 1.12
HMGXB4-203ENST00000420166 DPEP3Q9H4B8 488 aa22.03■■□□□ 1.12
HMGXB4-203ENST00000420166 CRTAC1Q9NQ79 661 aa22.03■■□□□ 1.12
HMGXB4-203ENST00000420166 ABI2Q9NYB9 513 aaPredicted RBP22.03■■□□□ 1.12
HMGXB4-203ENST00000420166 PCDHB5Q9Y5E4 795 aa22.03■■□□□ 1.12
HMGXB4-203ENST00000420166 XIRP2A4UGR9 3374 aa22.02■■□□□ 1.12
HMGXB4-203ENST00000420166 MYBPHLA2RUH7 354 aa22.02■■□□□ 1.12
HMGXB4-203ENST00000420166 CCL16O15467 120 aa22.02■■□□□ 1.12
HMGXB4-203ENST00000420166 XYLBO75191 536 aa22.02■■□□□ 1.12
HMGXB4-203ENST00000420166 PRKCSHP14314 528 aaPredicted RBP22.02■■□□□ 1.12
HMGXB4-203ENST00000420166 ZNF165P49910 485 aa22.02■■□□□ 1.12
HMGXB4-203ENST00000420166 NDST1P52848 882 aa22.02■■□□□ 1.12
HMGXB4-203ENST00000420166 MAPRE1Q15691 268 aaKnown RBP22.02■■□□□ 1.12
HMGXB4-203ENST00000420166 MIIPQ5JXC2 388 aa22.02■■□□□ 1.12
HMGXB4-203ENST00000420166 ATAT1Q5SQI0 421 aa22.02■■□□□ 1.12
HMGXB4-203ENST00000420166 UNC93AQ86WB7 457 aa22.02■■□□□ 1.12
HMGXB4-203ENST00000420166 NECTIN4Q96NY8 510 aa22.02■■□□□ 1.12
HMGXB4-203ENST00000420166 NT5C1BQ96P26 610 aa22.02■■□□□ 1.12
HMGXB4-203ENST00000420166 ARID3AQ99856 593 aa22.02■■□□□ 1.12
HMGXB4-203ENST00000420166 INTS2Q9H0H0 1204 aaKnown RBP22.02■■□□□ 1.12
HMGXB4-203ENST00000420166 ABCB6Q9NP58 842 aa22.02■■□□□ 1.12
HMGXB4-203ENST00000420166 GCNT4Q9P109 453 aa22.02■■□□□ 1.12
HMGXB4-203ENST00000420166 HMGXB4Q9UGU5 601 aa22.02■■□□□ 1.12
HMGXB4-203ENST00000420166 SLC27A5Q9Y2P5 690 aa22.02■■□□□ 1.12
HMGXB4-203ENST00000420166 LRG1P02750 347 aa22.01■■□□□ 1.11
HMGXB4-203ENST00000420166 PTPN1P18031 435 aaKnown RBP22.01■■□□□ 1.11
HMGXB4-203ENST00000420166 TWF1Q12792 350 aa22.01■■□□□ 1.11
HMGXB4-203ENST00000420166 LRMPQ12912 555 aa22.01■■□□□ 1.11
HMGXB4-203ENST00000420166 VWA3BQ502W6 1294 aa22.01■■□□□ 1.11
HMGXB4-203ENST00000420166 TJAP1Q5JTD0 557 aa22.01■■□□□ 1.11
HMGXB4-203ENST00000420166 B3GALNT2Q8NCR0 500 aa22.01■■□□□ 1.11
HMGXB4-203ENST00000420166 EHBP1Q8NDI1 1231 aa22.01■■□□□ 1.11
HMGXB4-203ENST00000420166 NDST4Q9H3R1 872 aa22.01■■□□□ 1.11
HMGXB4-203ENST00000420166 PIDD1Q9HB75 910 aa22.01■■□□□ 1.11
HMGXB4-203ENST00000420166 NOTCH4Q99466 2003 aa22.01■■□□□ 1.11
HMGXB4-203ENST00000420166 UNC80Q8N2C7 3258 aa22■■□□□ 1.11
HMGXB4-203ENST00000420166 GTPBP10A4D1E9 387 aaKnown RBP22■■□□□ 1.11
HMGXB4-203ENST00000420166 HAPLN1P10915 354 aaPredicted RBP22■■□□□ 1.11
HMGXB4-203ENST00000420166 ZNF18P17022 549 aa22■■□□□ 1.11
HMGXB4-203ENST00000420166 CD58P19256 250 aa22■■□□□ 1.11
HMGXB4-203ENST00000420166 TBXAS1P24557 533 aaPredicted RBP22■■□□□ 1.11
HMGXB4-203ENST00000420166 CUL2Q13617 745 aa22■■□□□ 1.11
HMGXB4-203ENST00000420166 KRT31Q15323 416 aa22■■□□□ 1.11
HMGXB4-203ENST00000420166 MGAT5BQ3V5L5 792 aa22■■□□□ 1.11
HMGXB4-203ENST00000420166 MDH1BQ5I0G3 518 aa22■■□□□ 1.11
HMGXB4-203ENST00000420166 GBP6Q6ZN66 633 aa22■■□□□ 1.11
HMGXB4-203ENST00000420166 C4orf50Q6ZRC1 276 aa22■■□□□ 1.11
HMGXB4-203ENST00000420166 SPATA2LQ8IUW3 424 aaPredicted RBP22■■□□□ 1.11
HMGXB4-203ENST00000420166 DHX40Q8IX18 779 aaKnown RBP22■■□□□ 1.11
HMGXB4-203ENST00000420166 TTC39CQ8N584 583 aa22■■□□□ 1.11
HMGXB4-203ENST00000420166 MYCBPAPQ8TBZ2 947 aa22■■□□□ 1.11
HMGXB4-203ENST00000420166 MYLPFQ96A32 169 aa22■■□□□ 1.11
HMGXB4-203ENST00000420166 FUBP3Q96I24 572 aaKnown RBP eCLIP22■■□□□ 1.11
HMGXB4-203ENST00000420166 TNIP3Q96KP6 325 aa22■■□□□ 1.11
HMGXB4-203ENST00000420166 SEPT5Q99719 369 aaPredicted RBP22■■□□□ 1.11
HMGXB4-203ENST00000420166 LPIN3Q9BQK8 851 aa22■■□□□ 1.11
HMGXB4-203ENST00000420166 CRACR2AQ9BSW2 395 aa22■■□□□ 1.11
HMGXB4-203ENST00000420166 HSD3B7Q9H2F3 369 aa22■■□□□ 1.11
HMGXB4-203ENST00000420166 POMKQ9H5K3 350 aa22■■□□□ 1.11
HMGXB4-203ENST00000420166 FAM124BQ9H5Z6 455 aaPredicted RBP22■■□□□ 1.11
HMGXB4-203ENST00000420166 TAB2Q9NYJ8 693 aa22■■□□□ 1.11
HMGXB4-203ENST00000420166 SMTNL1A8MU46 457 aa21.99■■□□□ 1.11
HMGXB4-203ENST00000420166 CILPO75339 1184 aa21.99■■□□□ 1.11
HMGXB4-203ENST00000420166 SOAT2O75908 522 aa21.99■■□□□ 1.11
HMGXB4-203ENST00000420166 TUFMP49411 452 aaKnown RBP21.99■■□□□ 1.11
HMGXB4-203ENST00000420166 PLD1Q13393 1074 aa21.99■■□□□ 1.11
HMGXB4-203ENST00000420166 CFAP221Q4G0U5 840 aa21.99■■□□□ 1.11
HMGXB4-203ENST00000420166 ACOT1Q86TX2 421 aa21.99■■□□□ 1.11
HMGXB4-203ENST00000420166 CRYBG2Q8N1P7 616 aa21.99■■□□□ 1.11
HMGXB4-203ENST00000420166 WHAMMQ8TF30 809 aa21.99■■□□□ 1.11
HMGXB4-203ENST00000420166 PCED1BQ96HM7 432 aa21.99■■□□□ 1.11
HMGXB4-203ENST00000420166 CISHQ9NSE2 258 aa21.99■■□□□ 1.11
HMGXB4-203ENST00000420166 MYH10P35580 1976 aa21.98■■□□□ 1.11
HMGXB4-203ENST00000420166 CYP2F1P24903 491 aa21.98■■□□□ 1.11
HMGXB4-203ENST00000420166 ALDH1A3P47895 512 aa21.98■■□□□ 1.11
HMGXB4-203ENST00000420166 EPHB3P54753 998 aa21.98■■□□□ 1.11
HMGXB4-203ENST00000420166 YWHAEP62258 255 aaKnown RBP21.98■■□□□ 1.11
HMGXB4-203ENST00000420166 CYP27A1Q02318 531 aa21.98■■□□□ 1.11
HMGXB4-203ENST00000420166 ORC1Q13415 861 aa21.98■■□□□ 1.11
HMGXB4-203ENST00000420166 EXOC3L4Q17RC7 722 aa21.98■■□□□ 1.11
HMGXB4-203ENST00000420166 TRIM65Q6PJ69 517 aa21.98■■□□□ 1.11
HMGXB4-203ENST00000420166 ARHGEF19Q8IW93 802 aa21.98■■□□□ 1.11
HMGXB4-203ENST00000420166 PPM1KQ8N3J5 372 aa21.98■■□□□ 1.11
HMGXB4-203ENST00000420166 TWNKQ96RR1 684 aa21.98■■□□□ 1.11
HMGXB4-203ENST00000420166 PHF7Q9BWX1 381 aaPredicted RBP21.98■■□□□ 1.11
HMGXB4-203ENST00000420166 NT5C1AQ9BXI3 368 aa21.98■■□□□ 1.11
HMGXB4-203ENST00000420166 WDR6Q9NNW5 1121 aaKnown RBP21.98■■□□□ 1.11
HMGXB4-203ENST00000420166 CEP72Q9P209 647 aa21.98■■□□□ 1.11
HMGXB4-203ENST00000420166 DOCK8Q8NF50 2099 aa21.98■■□□□ 1.11
HMGXB4-203ENST00000420166 CLUHO75153 1309 aa21.98■■□□□ 1.11
HMGXB4-203ENST00000420166 NCOR1O75376 2440 aa21.98■■□□□ 1.11
HMGXB4-203ENST00000420166 C5orf42Q9H799 3197 aa21.97■■□□□ 1.11
HMGXB4-203ENST00000420166 PES1O00541 588 aaKnown RBP21.97■■□□□ 1.11
HMGXB4-203ENST00000420166 CAVIN2O95810 425 aa21.97■■□□□ 1.11
HMGXB4-203ENST00000420166 MAGEA11P43364 429 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms