RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 KIF22Q14807 665 aa4.11□□□□□ -1.75
SDCBPP3-201ENST00000419629 FCRLBQ6BAA4 426 aa4.11□□□□□ -1.75
SDCBPP3-201ENST00000419629 FAM90A1Q86YD7 464 aa4.11□□□□□ -1.75
SDCBPP3-201ENST00000419629 TCEAL8Q8IYN2 117 aa4.11□□□□□ -1.75
SDCBPP3-201ENST00000419629 KLHDC4Q8TBB5 520 aa4.11□□□□□ -1.75
SDCBPP3-201ENST00000419629 SLC35G2Q8TBE7 412 aa4.11□□□□□ -1.75
SDCBPP3-201ENST00000419629 IPO4Q8TEX9 1081 aaKnown RBP4.11□□□□□ -1.75
SDCBPP3-201ENST00000419629 KLHL32Q96NJ5 620 aa4.11□□□□□ -1.75
SDCBPP3-201ENST00000419629 NAP1L5Q96NT1 182 aaPredicted RBP4.11□□□□□ -1.75
SDCBPP3-201ENST00000419629 CGRRF1Q99675 332 aa4.11□□□□□ -1.75
SDCBPP3-201ENST00000419629 PDCL3Q9H2J4 239 aa4.11□□□□□ -1.75
SDCBPP3-201ENST00000419629 MRPL46Q9H2W6 279 aaKnown RBP4.11□□□□□ -1.75
SDCBPP3-201ENST00000419629 NRIP3Q9NQ35 241 aa4.11□□□□□ -1.75
SDCBPP3-201ENST00000419629 C1orf112Q9NSG2 853 aa4.11□□□□□ -1.75
SDCBPP3-201ENST00000419629 ADAM21Q9UKJ8 722 aa4.11□□□□□ -1.75
SDCBPP3-201ENST00000419629 NOB1Q9ULX3 412 aaKnown RBP4.11□□□□□ -1.75
SDCBPP3-201ENST00000419629 DHX57Q6P158 1386 aaKnown RBP4.11□□□□□ -1.75
SDCBPP3-201ENST00000419629 RB1CC1Q8TDY2 1594 aa4.1□□□□□ -1.75
SDCBPP3-201ENST00000419629 PRAMEF33A0A0G2JMD5 474 aa4.1□□□□□ -1.75
SDCBPP3-201ENST00000419629 E7ENX8 843 aa4.1□□□□□ -1.75
SDCBPP3-201ENST00000419629 POLRMTO00411 1230 aaKnown RBP4.1□□□□□ -1.75
SDCBPP3-201ENST00000419629 TOR1BO14657 336 aa4.1□□□□□ -1.75
SDCBPP3-201ENST00000419629 CTNND1O60716 968 aaKnown RBP4.1□□□□□ -1.75
SDCBPP3-201ENST00000419629 PRAMEF10O60809 474 aa4.1□□□□□ -1.75
SDCBPP3-201ENST00000419629 CHRM2P08172 466 aa4.1□□□□□ -1.75
SDCBPP3-201ENST00000419629 HOXB6P17509 224 aaKnown RBP4.1□□□□□ -1.75
SDCBPP3-201ENST00000419629 GATA3P23771 443 aa4.1□□□□□ -1.75
SDCBPP3-201ENST00000419629 HTR1BP28222 390 aa4.1□□□□□ -1.75
SDCBPP3-201ENST00000419629 KCNJ5P48544 419 aa4.1□□□□□ -1.75
SDCBPP3-201ENST00000419629 ANXA11P50995 505 aaKnown RBP4.1□□□□□ -1.75
SDCBPP3-201ENST00000419629 ZNF135P52742 658 aaPredicted RBP4.1□□□□□ -1.75
SDCBPP3-201ENST00000419629 SATB1Q01826 763 aa4.1□□□□□ -1.75
SDCBPP3-201ENST00000419629 TAP2Q03519 686 aa4.1□□□□□ -1.75
SDCBPP3-201ENST00000419629 FGL2Q14314 439 aa4.1□□□□□ -1.75
SDCBPP3-201ENST00000419629 HABP2Q14520 560 aaPredicted RBP4.1□□□□□ -1.75
SDCBPP3-201ENST00000419629 PLS1Q14651 629 aa4.1□□□□□ -1.75
SDCBPP3-201ENST00000419629 KHDC1LQ5JSQ8 128 aa4.1□□□□□ -1.75
SDCBPP3-201ENST00000419629 SUMO4Q6EEV6 95 aa4.1□□□□□ -1.75
SDCBPP3-201ENST00000419629 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.1□□□□□ -1.75
SDCBPP3-201ENST00000419629 C11orf87Q6NUJ2 197 aa4.1□□□□□ -1.75
SDCBPP3-201ENST00000419629 TAPT1Q6NXT6 567 aa4.1□□□□□ -1.75
SDCBPP3-201ENST00000419629 EPM2AIP1Q7L775 607 aaPredicted RBP4.1□□□□□ -1.75
SDCBPP3-201ENST00000419629 CFAP52Q8N1V2 620 aa4.1□□□□□ -1.75
SDCBPP3-201ENST00000419629 TMIEQ8NEW7 156 aa4.1□□□□□ -1.75
SDCBPP3-201ENST00000419629 LPIN2Q92539 896 aa4.1□□□□□ -1.75
SDCBPP3-201ENST00000419629 TAAR9Q96RI9 348 aa4.1□□□□□ -1.75
SDCBPP3-201ENST00000419629 HAPLN3Q96S86 360 aa4.1□□□□□ -1.75
SDCBPP3-201ENST00000419629 C1orf43Q9BWL3 253 aa4.1□□□□□ -1.75
SDCBPP3-201ENST00000419629 TLR10Q9BXR5 811 aa4.1□□□□□ -1.75
SDCBPP3-201ENST00000419629 FAM204AQ9H8W3 233 aa4.1□□□□□ -1.75
SDCBPP3-201ENST00000419629 GPR35Q9HC97 309 aa4.1□□□□□ -1.75
SDCBPP3-201ENST00000419629 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.1□□□□□ -1.75
SDCBPP3-201ENST00000419629 VSX1Q9NZR4 365 aaPredicted RBP4.1□□□□□ -1.75
SDCBPP3-201ENST00000419629 FLRT1Q9NZU1 646 aa4.1□□□□□ -1.75
SDCBPP3-201ENST00000419629 SLC45A2Q9UMX9 530 aa4.1□□□□□ -1.75
SDCBPP3-201ENST00000419629 PCDHA1Q9Y5I3 950 aa4.1□□□□□ -1.75
SDCBPP3-201ENST00000419629 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.1□□□□□ -1.75
SDCBPP3-201ENST00000419629 ADM5C9JUS6 153 aa4.09□□□□□ -1.75
SDCBPP3-201ENST00000419629 TSPAN6O43657 245 aa4.09□□□□□ -1.75
SDCBPP3-201ENST00000419629 UBXN7O94888 489 aa4.09□□□□□ -1.75
SDCBPP3-201ENST00000419629 ALDH2P05091 517 aa4.09□□□□□ -1.75
SDCBPP3-201ENST00000419629 PTGER1P34995 402 aa4.09□□□□□ -1.75
SDCBPP3-201ENST00000419629 KRTAP10-7P60409 375 aaPredicted RBP4.09□□□□□ -1.75
SDCBPP3-201ENST00000419629 NKX6-1P78426 367 aaPredicted RBP4.09□□□□□ -1.75
SDCBPP3-201ENST00000419629 GPSM2P81274 684 aa4.09□□□□□ -1.75
SDCBPP3-201ENST00000419629 EIF2B5Q13144 721 aaKnown RBP4.09□□□□□ -1.75
SDCBPP3-201ENST00000419629 MLC1Q15049 377 aa4.09□□□□□ -1.75
SDCBPP3-201ENST00000419629 PTPRRQ15256 657 aa4.09□□□□□ -1.75
SDCBPP3-201ENST00000419629 LLGL1Q15334 1064 aa4.09□□□□□ -1.75
SDCBPP3-201ENST00000419629 GFOD2Q3B7J2 385 aa4.09□□□□□ -1.75
SDCBPP3-201ENST00000419629 AMOTQ4VCS5 1084 aa4.09□□□□□ -1.75
SDCBPP3-201ENST00000419629 ARHGAP29Q52LW3 1261 aa4.09□□□□□ -1.75
SDCBPP3-201ENST00000419629 MTX3Q5HYI7 312 aa4.09□□□□□ -1.75
SDCBPP3-201ENST00000419629 EMC10Q5UCC4 262 aa4.09□□□□□ -1.75
SDCBPP3-201ENST00000419629 PPP4R4Q6NUP7 873 aa4.09□□□□□ -1.75
SDCBPP3-201ENST00000419629 TSHZ1Q6ZSZ6 1077 aa4.09□□□□□ -1.75
SDCBPP3-201ENST00000419629 MTERF4Q7Z6M4 381 aaKnown RBP4.09□□□□□ -1.75
SDCBPP3-201ENST00000419629 MYO1HQ8N1T3 1032 aa4.09□□□□□ -1.75
SDCBPP3-201ENST00000419629 MAGEB6Q8N7X4 407 aa4.09□□□□□ -1.75
SDCBPP3-201ENST00000419629 VGLL2Q8N8G2 317 aa4.09□□□□□ -1.75
SDCBPP3-201ENST00000419629 B3GALNT2Q8NCR0 500 aa4.09□□□□□ -1.75
SDCBPP3-201ENST00000419629 SLC30A5Q8TAD4 765 aa4.09□□□□□ -1.75
SDCBPP3-201ENST00000419629 SNX19Q92543 992 aa4.09□□□□□ -1.75
SDCBPP3-201ENST00000419629 ZBTB9Q96C00 473 aa4.09□□□□□ -1.75
SDCBPP3-201ENST00000419629 PGBD1Q96JS3 809 aa4.09□□□□□ -1.75
SDCBPP3-201ENST00000419629 MOGAT1Q96PD6 335 aa4.09□□□□□ -1.75
SDCBPP3-201ENST00000419629 TRIB1Q96RU8 372 aa4.09□□□□□ -1.75
SDCBPP3-201ENST00000419629 PIH1D1Q9NWS0 290 aaKnown RBP4.09□□□□□ -1.75
SDCBPP3-201ENST00000419629 NAP1L2Q9ULW6 460 aaPredicted RBP4.09□□□□□ -1.75
SDCBPP3-201ENST00000419629 ZNF804BA4D1E1 1349 aa4.09□□□□□ -1.75
SDCBPP3-201ENST00000419629 ARID4BQ4LE39 1312 aaPredicted RBP4.09□□□□□ -1.75
SDCBPP3-201ENST00000419629 A0A088AWK7 358 aa4.08□□□□□ -1.76
SDCBPP3-201ENST00000419629 A0A1W2PPL8 197 aa4.08□□□□□ -1.76
SDCBPP3-201ENST00000419629 FAM227AF5H4B4 570 aa4.08□□□□□ -1.76
SDCBPP3-201ENST00000419629 GCOM1H8Y6P7 765 aaPredicted RBP4.08□□□□□ -1.76
SDCBPP3-201ENST00000419629 TCERG1O14776 1098 aaKnown RBP4.08□□□□□ -1.76
SDCBPP3-201ENST00000419629 NACADO15069 1562 aa4.08□□□□□ -1.76
SDCBPP3-201ENST00000419629 TP73O15350 636 aa4.08□□□□□ -1.76
SDCBPP3-201ENST00000419629 TTLL1O95922 423 aa4.08□□□□□ -1.76
SDCBPP3-201ENST00000419629 ITGALP20701 1170 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms