RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 ARHGAP15Q53QZ3 475 aa17.65■□□□□ 0.42
LINC00404-201ENST00000418660 CCDC105Q8IYK2 499 aa17.65■□□□□ 0.42
LINC00404-201ENST00000418660 PLEKHO2Q8TD55 490 aa17.65■□□□□ 0.42
LINC00404-201ENST00000418660 KBTBD7Q8WVZ9 684 aa17.65■□□□□ 0.42
LINC00404-201ENST00000418660 E2F7Q96AV8 911 aa17.65■□□□□ 0.42
LINC00404-201ENST00000418660 MMS19Q96T76 1030 aa17.65■□□□□ 0.42
LINC00404-201ENST00000418660 TRMT61BQ9BVS5 477 aaKnown RBP17.65■□□□□ 0.42
LINC00404-201ENST00000418660 SLITRK6Q9H5Y7 841 aa17.65■□□□□ 0.42
LINC00404-201ENST00000418660 CDH9Q9ULB4 789 aa17.65■□□□□ 0.42
LINC00404-201ENST00000418660 TRAF3IP3Q9Y228 551 aa17.65■□□□□ 0.42
LINC00404-201ENST00000418660 MYBPHLA2RUH7 354 aa17.64■□□□□ 0.41
LINC00404-201ENST00000418660 HCRTO43612 131 aa17.64■□□□□ 0.41
LINC00404-201ENST00000418660 CALUO43852 315 aaPredicted RBP17.64■□□□□ 0.41
LINC00404-201ENST00000418660 PHACTR2O75167 634 aa17.64■□□□□ 0.41
LINC00404-201ENST00000418660 PSMC3P17980 439 aa17.64■□□□□ 0.41
LINC00404-201ENST00000418660 LMO2P25791 158 aa17.64■□□□□ 0.41
LINC00404-201ENST00000418660 CDC25CP30307 473 aa17.64■□□□□ 0.41
LINC00404-201ENST00000418660 VIPR2P41587 438 aa17.64■□□□□ 0.41
LINC00404-201ENST00000418660 RPL10AP62906 217 aaKnown RBP17.64■□□□□ 0.41
LINC00404-201ENST00000418660 CFAP221Q4G0U5 840 aa17.64■□□□□ 0.41
LINC00404-201ENST00000418660 FAM171BQ6P995 826 aa17.64■□□□□ 0.41
LINC00404-201ENST00000418660 VITQ6UXI7 678 aa17.64■□□□□ 0.41
LINC00404-201ENST00000418660 SPATA2LQ8IUW3 424 aaPredicted RBP17.64■□□□□ 0.41
LINC00404-201ENST00000418660 FMR1NBQ8N0W7 255 aaPredicted RBP17.64■□□□□ 0.41
LINC00404-201ENST00000418660 DTWD2Q8NBA8 298 aa17.64■□□□□ 0.41
LINC00404-201ENST00000418660 DEPDC1BQ8WUY9 529 aa17.64■□□□□ 0.41
LINC00404-201ENST00000418660 DNASE1L2Q92874 299 aa17.64■□□□□ 0.41
LINC00404-201ENST00000418660 FUBP3Q96I24 572 aaKnown RBP eCLIP17.64■□□□□ 0.41
LINC00404-201ENST00000418660 MKNK1Q9BUB5 465 aa17.64■□□□□ 0.41
LINC00404-201ENST00000418660 DDX23Q9BUQ8 820 aaKnown RBP17.64■□□□□ 0.41
LINC00404-201ENST00000418660 IL21Q9HBE4 155 aa17.64■□□□□ 0.41
LINC00404-201ENST00000418660 SIT1Q9Y3P8 196 aa17.64■□□□□ 0.41
LINC00404-201ENST00000418660 KANSL1LA0AUZ9 987 aa17.63■□□□□ 0.41
LINC00404-201ENST00000418660 LRRIQ3A6PVS8 624 aaPredicted RBP17.63■□□□□ 0.41
LINC00404-201ENST00000418660 H0Y858 1186 aa17.63■□□□□ 0.41
LINC00404-201ENST00000418660 TACC1O75410 805 aa17.63■□□□□ 0.41
LINC00404-201ENST00000418660 HMGA1P17096 107 aaKnown RBP17.63■□□□□ 0.41
LINC00404-201ENST00000418660 CYP2F1P24903 491 aa17.63■□□□□ 0.41
LINC00404-201ENST00000418660 MYL6P60660 151 aa17.63■□□□□ 0.41
LINC00404-201ENST00000418660 TNNC1P63316 161 aa17.63■□□□□ 0.41
LINC00404-201ENST00000418660 GRM2Q14416 872 aa17.63■□□□□ 0.41
LINC00404-201ENST00000418660 NFIL3Q16649 462 aa17.63■□□□□ 0.41
LINC00404-201ENST00000418660 WDR72Q3MJ13 1102 aa17.63■□□□□ 0.41
LINC00404-201ENST00000418660 STXBP5Q5T5C0 1151 aa17.63■□□□□ 0.41
LINC00404-201ENST00000418660 GPR158Q5T848 1215 aa17.63■□□□□ 0.41
LINC00404-201ENST00000418660 MFSD6LQ8IWD5 586 aa17.63■□□□□ 0.41
LINC00404-201ENST00000418660 GUF1Q8N442 669 aaKnown RBP17.63■□□□□ 0.41
LINC00404-201ENST00000418660 TMC2Q8TDI7 906 aa17.63■□□□□ 0.41
LINC00404-201ENST00000418660 SYAP1Q96A49 352 aaPredicted RBP17.63■□□□□ 0.41
LINC00404-201ENST00000418660 GCNAQ96QF7 691 aa17.63■□□□□ 0.41
LINC00404-201ENST00000418660 SYT15Q9BQS2 421 aa17.63■□□□□ 0.41
LINC00404-201ENST00000418660 XYLT2Q9H1B5 865 aa17.63■□□□□ 0.41
LINC00404-201ENST00000418660 TASP1Q9H6P5 420 aa17.63■□□□□ 0.41
LINC00404-201ENST00000418660 BRD9Q9H8M2 597 aa17.63■□□□□ 0.41
LINC00404-201ENST00000418660 FRMD4BQ9Y2L6 1034 aa17.63■□□□□ 0.41
LINC00404-201ENST00000418660 HEPACAM2A8MVW5 462 aa17.62■□□□□ 0.41
LINC00404-201ENST00000418660 ATP2C2O75185 946 aa17.62■□□□□ 0.41
LINC00404-201ENST00000418660 C4BPAP04003 597 aaKnown RBP17.62■□□□□ 0.41
LINC00404-201ENST00000418660 PDGFRBP09619 1106 aa17.62■□□□□ 0.41
LINC00404-201ENST00000418660 CSH1P0DML2 217 aa17.62■□□□□ 0.41
LINC00404-201ENST00000418660 CSH2P0DML3 217 aa17.62■□□□□ 0.41
LINC00404-201ENST00000418660 WEE1P30291 646 aa17.62■□□□□ 0.41
LINC00404-201ENST00000418660 GDI1P31150 447 aa17.62■□□□□ 0.41
LINC00404-201ENST00000418660 GNL1P36915 607 aaPredicted RBP17.62■□□□□ 0.41
LINC00404-201ENST00000418660 GPR15P49685 360 aa17.62■□□□□ 0.41
LINC00404-201ENST00000418660 BIRC3Q13489 604 aa17.62■□□□□ 0.41
LINC00404-201ENST00000418660 MAPRE1Q15691 268 aaKnown RBP17.62■□□□□ 0.41
LINC00404-201ENST00000418660 DDR2Q16832 855 aa17.62■□□□□ 0.41
LINC00404-201ENST00000418660 CCDC142Q17RM4 750 aa17.62■□□□□ 0.41
LINC00404-201ENST00000418660 TDRD10Q5VZ19 366 aaKnown RBP17.62■□□□□ 0.41
LINC00404-201ENST00000418660 CEP135Q66GS9 1140 aa17.62■□□□□ 0.41
LINC00404-201ENST00000418660 C4orf50Q6ZRC1 276 aa17.62■□□□□ 0.41
LINC00404-201ENST00000418660 ARID3BQ8IVW6 561 aaPredicted RBP17.62■□□□□ 0.41
LINC00404-201ENST00000418660 PJA1Q8NG27 643 aa17.62■□□□□ 0.41
LINC00404-201ENST00000418660 ATOH1Q92858 354 aaPredicted RBP17.62■□□□□ 0.41
LINC00404-201ENST00000418660 IRF7Q92985 503 aa17.62■□□□□ 0.41
LINC00404-201ENST00000418660 MRPL45Q9BRJ2 306 aaKnown RBP17.62■□□□□ 0.41
LINC00404-201ENST00000418660 FOXQ1Q9C009 403 aa17.62■□□□□ 0.41
LINC00404-201ENST00000418660 SNX25Q9H3E2 840 aa17.62■□□□□ 0.41
LINC00404-201ENST00000418660 VRTNQ9H8Y1 702 aa17.62■□□□□ 0.41
LINC00404-201ENST00000418660 TRPV5Q9NQA5 729 aa17.62■□□□□ 0.41
LINC00404-201ENST00000418660 MAGEC2Q9UBF1 373 aaPredicted RBP17.62■□□□□ 0.41
LINC00404-201ENST00000418660 ZMYM5Q9UJ78 669 aa17.62■□□□□ 0.41
LINC00404-201ENST00000418660 MAPK8IP1Q9UQF2 711 aa17.62■□□□□ 0.41
LINC00404-201ENST00000418660 ZNF263O14978 683 aa17.61■□□□□ 0.41
LINC00404-201ENST00000418660 MAPK13O15264 365 aa17.61■□□□□ 0.41
LINC00404-201ENST00000418660 F11P03951 625 aa17.61■□□□□ 0.41
LINC00404-201ENST00000418660 DCNP07585 359 aaKnown RBP17.61■□□□□ 0.41
LINC00404-201ENST00000418660 MAGEA11P43364 429 aa17.61■□□□□ 0.41
LINC00404-201ENST00000418660 NLRP12P59046 1061 aa17.61■□□□□ 0.41
LINC00404-201ENST00000418660 PSMC1P62191 440 aaKnown RBP17.61■□□□□ 0.41
LINC00404-201ENST00000418660 DLG4P78352 724 aa17.61■□□□□ 0.41
LINC00404-201ENST00000418660 CYP4F8P98187 520 aa17.61■□□□□ 0.41
LINC00404-201ENST00000418660 SDHAF4Q5VUM1 108 aa17.61■□□□□ 0.41
LINC00404-201ENST00000418660 ALYREFQ86V81 257 aaKnown RBP17.61■□□□□ 0.41
LINC00404-201ENST00000418660 ENGASEQ8NFI3 743 aa17.61■□□□□ 0.41
LINC00404-201ENST00000418660 RSPRY1Q96DX4 576 aa17.61■□□□□ 0.41
LINC00404-201ENST00000418660 NELL2Q99435 816 aa17.61■□□□□ 0.41
LINC00404-201ENST00000418660 OSBPL6Q9BZF3 934 aa17.61■□□□□ 0.41
LINC00404-201ENST00000418660 CRTAC1Q9NQ79 661 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms