RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 RPL17P18621 184 aaKnown RBP3.24□□□□□ -1.89
VPS41-206ENST00000418457 CHRM3P20309 590 aa3.24□□□□□ -1.89
VPS41-206ENST00000418457 ITGALP20701 1170 aa3.24□□□□□ -1.89
VPS41-206ENST00000418457 FDXRP22570 491 aa3.24□□□□□ -1.89
VPS41-206ENST00000418457 MCM7P33993 719 aa3.24□□□□□ -1.89
VPS41-206ENST00000418457 UCP3P55916 312 aa3.24□□□□□ -1.89
VPS41-206ENST00000418457 MC2RQ01718 297 aa3.24□□□□□ -1.89
VPS41-206ENST00000418457 FMO1Q01740 532 aa3.24□□□□□ -1.89
VPS41-206ENST00000418457 CTBP1Q13363 440 aa3.24□□□□□ -1.89
VPS41-206ENST00000418457 TP53BP2Q13625 1128 aa3.24□□□□□ -1.89
VPS41-206ENST00000418457 DYRK1AQ13627 763 aa3.24□□□□□ -1.89
VPS41-206ENST00000418457 HLXQ14774 488 aaPredicted RBP3.24□□□□□ -1.89
VPS41-206ENST00000418457 PTPAQ15257 358 aa3.24□□□□□ -1.89
VPS41-206ENST00000418457 CD300EQ496F6 205 aaPredicted RBP3.24□□□□□ -1.89
VPS41-206ENST00000418457 LONRF3Q496Y0 759 aa3.24□□□□□ -1.89
VPS41-206ENST00000418457 TAF2Q6P1X5 1199 aa3.24□□□□□ -1.89
VPS41-206ENST00000418457 CRIP3Q6Q6R5 217 aa3.24□□□□□ -1.89
VPS41-206ENST00000418457 DBX2Q6ZNG2 339 aa3.24□□□□□ -1.89
VPS41-206ENST00000418457 ADGRG5Q8IZF4 528 aa3.24□□□□□ -1.89
VPS41-206ENST00000418457 KRT78Q8N1N4 520 aa3.24□□□□□ -1.89
VPS41-206ENST00000418457 SLC15A4Q8N697 577 aa3.24□□□□□ -1.89
VPS41-206ENST00000418457 DNAJC5GQ8N7S2 189 aa3.24□□□□□ -1.89
VPS41-206ENST00000418457 SLC46A1Q96NT5 459 aa3.24□□□□□ -1.89
VPS41-206ENST00000418457 MOGAT1Q96PD6 335 aa3.24□□□□□ -1.89
VPS41-206ENST00000418457 HEPHQ9BQS7 1158 aa3.24□□□□□ -1.89
VPS41-206ENST00000418457 MLST8Q9BVC4 326 aa3.24□□□□□ -1.89
VPS41-206ENST00000418457 SPATA5L1Q9BVQ7 753 aa3.24□□□□□ -1.89
VPS41-206ENST00000418457 BTBD1Q9H0C5 482 aa3.24□□□□□ -1.89
VPS41-206ENST00000418457 UNKLQ9H9P5 680 aaKnown RBP3.24□□□□□ -1.89
VPS41-206ENST00000418457 SMURF2Q9HAU4 748 aa3.24□□□□□ -1.89
VPS41-206ENST00000418457 TBCCD1Q9NVR7 557 aa3.24□□□□□ -1.89
VPS41-206ENST00000418457 ANKFY1Q9P2R3 1169 aa3.24□□□□□ -1.89
VPS41-206ENST00000418457 XPR1Q9UBH6 696 aa3.24□□□□□ -1.89
VPS41-206ENST00000418457 TESQ9UGI8 421 aaKnown RBP3.24□□□□□ -1.89
VPS41-206ENST00000418457 AFF4Q9UHB7 1163 aaKnown RBP3.24□□□□□ -1.89
VPS41-206ENST00000418457 SNX13Q9Y5W8 968 aa3.24□□□□□ -1.89
VPS41-206ENST00000418457 HS3ST4Q9Y661 456 aa3.24□□□□□ -1.89
VPS41-206ENST00000418457 SAMD9Q5K651 1589 aa3.24□□□□□ -1.89
VPS41-206ENST00000418457 SPATA31A3Q5VYP0 1347 aa3.23□□□□□ -1.89
VPS41-206ENST00000418457 TCOF1Q13428 1488 aaKnown RBP3.23□□□□□ -1.89
VPS41-206ENST00000418457 RIMBP3CA6NJZ7 1639 aa3.23□□□□□ -1.89
VPS41-206ENST00000418457 RIMBP3BA6NNM3 1639 aa3.23□□□□□ -1.89
VPS41-206ENST00000418457 RIMBP3Q9UFD9 1639 aa3.23□□□□□ -1.89
VPS41-206ENST00000418457 A0A087WWL8 130 aa3.23□□□□□ -1.89
VPS41-206ENST00000418457 ANO9A1A5B4 782 aa3.23□□□□□ -1.89
VPS41-206ENST00000418457 RHPN2P1A8MT19 583 aa3.23□□□□□ -1.89
VPS41-206ENST00000418457 F5H697 171 aa3.23□□□□□ -1.89
VPS41-206ENST00000418457 NARSO43776 548 aaKnown RBP3.23□□□□□ -1.89
VPS41-206ENST00000418457 ITGAMP11215 1152 aa3.23□□□□□ -1.89
VPS41-206ENST00000418457 CYP2C9P11712 490 aa3.23□□□□□ -1.89
VPS41-206ENST00000418457 XRCC6P12956 609 aaKnown RBP eCLIP3.23□□□□□ -1.89
VPS41-206ENST00000418457 C6P13671 934 aa3.23□□□□□ -1.89
VPS41-206ENST00000418457 TACR2P21452 398 aa3.23□□□□□ -1.89
VPS41-206ENST00000418457 VIPR2P41587 438 aa3.23□□□□□ -1.89
VPS41-206ENST00000418457 NPTX2P47972 431 aa3.23□□□□□ -1.89
VPS41-206ENST00000418457 GCLCP48506 637 aaPredicted RBP3.23□□□□□ -1.89
VPS41-206ENST00000418457 NDUFV1P49821 464 aa3.23□□□□□ -1.89
VPS41-206ENST00000418457 TOB1P50616 345 aaPredicted RBP3.23□□□□□ -1.89
VPS41-206ENST00000418457 LOXL3P58215 753 aa3.23□□□□□ -1.89
VPS41-206ENST00000418457 SATB1Q01826 763 aa3.23□□□□□ -1.89
VPS41-206ENST00000418457 ABHD18Q0P651 414 aa3.23□□□□□ -1.89
VPS41-206ENST00000418457 PICALMQ13492 652 aa3.23□□□□□ -1.89
VPS41-206ENST00000418457 BOP1Q14137 746 aaKnown RBP3.23□□□□□ -1.89
VPS41-206ENST00000418457 IQCB1Q15051 598 aa3.23□□□□□ -1.89
VPS41-206ENST00000418457 MAP9Q49MG5 647 aa3.23□□□□□ -1.89
VPS41-206ENST00000418457 MYOM3Q5VTT5 1437 aa3.23□□□□□ -1.89
VPS41-206ENST00000418457 SP5Q6BEB4 398 aaPredicted RBP3.23□□□□□ -1.89
VPS41-206ENST00000418457 LAYNQ6UX15 382 aa3.23□□□□□ -1.89
VPS41-206ENST00000418457 DNMBPQ6XZF7 1577 aa3.23□□□□□ -1.89
VPS41-206ENST00000418457 MICALCLQ6ZW33 695 aa3.23□□□□□ -1.89
VPS41-206ENST00000418457 TMPRSS9Q7Z410 1059 aa3.23□□□□□ -1.89
VPS41-206ENST00000418457 C11orf96Q7Z7L8 435 aa3.23□□□□□ -1.89
VPS41-206ENST00000418457 GPR149Q86SP6 731 aa3.23□□□□□ -1.89
VPS41-206ENST00000418457 GGNQ86UU5 652 aa3.23□□□□□ -1.89
VPS41-206ENST00000418457 MPP5Q8N3R9 675 aa3.23□□□□□ -1.89
VPS41-206ENST00000418457 FBXO41Q8TF61 875 aa3.23□□□□□ -1.89
VPS41-206ENST00000418457 MAML1Q92585 1016 aa3.23□□□□□ -1.89
VPS41-206ENST00000418457 PHKBQ93100 1093 aa3.23□□□□□ -1.89
VPS41-206ENST00000418457 FUBP1Q96AE4 644 aaKnown RBP3.23□□□□□ -1.89
VPS41-206ENST00000418457 NMD3Q96D46 503 aaKnown RBP3.23□□□□□ -1.89
VPS41-206ENST00000418457 PTCD3Q96EY7 689 aaKnown RBP3.23□□□□□ -1.89
VPS41-206ENST00000418457 WDR11Q9BZH6 1224 aa3.23□□□□□ -1.89
VPS41-206ENST00000418457 ZNF518BQ9C0D4 1074 aa3.23□□□□□ -1.89
VPS41-206ENST00000418457 TTYH3Q9C0H2 523 aa3.23□□□□□ -1.89
VPS41-206ENST00000418457 SMOC2Q9H3U7 446 aa3.23□□□□□ -1.89
VPS41-206ENST00000418457 SERHL2Q9H4I8 314 aa3.23□□□□□ -1.89
VPS41-206ENST00000418457 A1CFQ9NQ94 594 aaKnown RBP3.23□□□□□ -1.89
VPS41-206ENST00000418457 PDS5BQ9NTI5 1447 aa3.23□□□□□ -1.89
VPS41-206ENST00000418457 INTS13Q9NVM9 706 aa3.23□□□□□ -1.89
VPS41-206ENST00000418457 STK32BQ9NY57 414 aa3.23□□□□□ -1.89
VPS41-206ENST00000418457 CORO2BQ9UQ03 480 aa3.23□□□□□ -1.89
VPS41-206ENST00000418457 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.23□□□□□ -1.89
VPS41-206ENST00000418457 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.23□□□□□ -1.89
VPS41-206ENST00000418457 ARHGEF11O15085 1522 aa3.23□□□□□ -1.89
VPS41-206ENST00000418457 ABCA10Q8WWZ4 1543 aa3.23□□□□□ -1.89
VPS41-206ENST00000418457 KDM5BQ9UGL1 1544 aa3.23□□□□□ -1.89
VPS41-206ENST00000418457 SNAPC4Q5SXM2 1469 aa3.22□□□□□ -1.89
VPS41-206ENST00000418457 FANCD2Q9BXW9 1451 aa3.22□□□□□ -1.89
VPS41-206ENST00000418457 ARID4BQ4LE39 1312 aaPredicted RBP3.22□□□□□ -1.89
VPS41-206ENST00000418457 NAIPQ13075 1403 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms