RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 ARHGAP10A1A4S6 786 aa8.41□□□□□ -1.06
HMGXB4-202ENST00000418170 E2F6O75461 281 aa8.41□□□□□ -1.06
HMGXB4-202ENST00000418170 CSDE1O75534 798 aaKnown RBP8.41□□□□□ -1.06
HMGXB4-202ENST00000418170 POLD1P28340 1107 aa8.41□□□□□ -1.06
HMGXB4-202ENST00000418170 PCSK6P29122 969 aa8.41□□□□□ -1.06
HMGXB4-202ENST00000418170 CLCN2P51788 898 aa8.41□□□□□ -1.06
HMGXB4-202ENST00000418170 OXCT1P55809 520 aa8.41□□□□□ -1.06
HMGXB4-202ENST00000418170 FOLH1Q04609 750 aa8.41□□□□□ -1.06
HMGXB4-202ENST00000418170 TBCCQ15814 346 aa8.41□□□□□ -1.06
HMGXB4-202ENST00000418170 BORAQ6PGQ7 559 aa8.41□□□□□ -1.06
HMGXB4-202ENST00000418170 CENPUQ71F23 418 aa8.41□□□□□ -1.06
HMGXB4-202ENST00000418170 HOMEZQ8IX15 550 aa8.41□□□□□ -1.06
HMGXB4-202ENST00000418170 SIKE1Q9BRV8 207 aa8.41□□□□□ -1.06
HMGXB4-202ENST00000418170 COL11A2P13942 1736 aaPredicted RBP8.41□□□□□ -1.06
HMGXB4-202ENST00000418170 SPDYE16A6NNV3 312 aaPredicted RBP8.41□□□□□ -1.06
HMGXB4-202ENST00000418170 SFI1A8K8P3 1242 aa8.41□□□□□ -1.06
HMGXB4-202ENST00000418170 GOLGA8RI6L899 631 aa8.41□□□□□ -1.06
HMGXB4-202ENST00000418170 TXNDC9O14530 226 aa8.41□□□□□ -1.06
HMGXB4-202ENST00000418170 KLF11O14901 512 aa8.41□□□□□ -1.06
HMGXB4-202ENST00000418170 CASQ2O14958 399 aaPredicted RBP8.41□□□□□ -1.06
HMGXB4-202ENST00000418170 RGL2O15211 777 aa8.41□□□□□ -1.06
HMGXB4-202ENST00000418170 ZNF24P17028 368 aa8.41□□□□□ -1.06
HMGXB4-202ENST00000418170 BGNP21810 368 aa8.41□□□□□ -1.06
HMGXB4-202ENST00000418170 HIBADHP31937 336 aaKnown RBP8.41□□□□□ -1.06
HMGXB4-202ENST00000418170 GPX6P59796 221 aa8.41□□□□□ -1.06
HMGXB4-202ENST00000418170 PDE1BQ01064 536 aa8.41□□□□□ -1.06
HMGXB4-202ENST00000418170 HIC1Q14526 733 aa8.41□□□□□ -1.06
HMGXB4-202ENST00000418170 MORF4L2Q15014 288 aa8.41□□□□□ -1.06
HMGXB4-202ENST00000418170 HSF5Q4G112 596 aaPredicted RBP8.41□□□□□ -1.06
HMGXB4-202ENST00000418170 TMC7Q7Z402 723 aa8.41□□□□□ -1.06
HMGXB4-202ENST00000418170 SLC47A2Q86VL8 602 aa8.41□□□□□ -1.06
HMGXB4-202ENST00000418170 TGFBRAP1Q8WUH2 860 aa8.41□□□□□ -1.06
HMGXB4-202ENST00000418170 MKL1Q969V6 931 aa8.41□□□□□ -1.06
HMGXB4-202ENST00000418170 MRPS26Q9BYN8 205 aaKnown RBP8.41□□□□□ -1.06
HMGXB4-202ENST00000418170 SENP6Q9GZR1 1112 aaPredicted RBP8.41□□□□□ -1.06
HMGXB4-202ENST00000418170 JMJD4Q9H9V9 463 aa8.41□□□□□ -1.06
HMGXB4-202ENST00000418170 INIPQ9NRY2 104 aa8.41□□□□□ -1.06
HMGXB4-202ENST00000418170 PPARGC1AQ9UBK2 798 aaKnown RBP8.41□□□□□ -1.06
HMGXB4-202ENST00000418170 UBE4BO95155 1302 aa8.41□□□□□ -1.06
HMGXB4-202ENST00000418170 E5RJQ4 531 aa8.41□□□□□ -1.06
HMGXB4-202ENST00000418170 E9PBE3 544 aa8.41□□□□□ -1.06
HMGXB4-202ENST00000418170 KCNQ2O43526 872 aa8.41□□□□□ -1.06
HMGXB4-202ENST00000418170 DENRO43583 198 aaKnown RBP8.41□□□□□ -1.06
HMGXB4-202ENST00000418170 PORP16435 677 aaPredicted RBP8.41□□□□□ -1.06
HMGXB4-202ENST00000418170 FUT4P22083 530 aa8.41□□□□□ -1.06
HMGXB4-202ENST00000418170 SLC5A2P31639 672 aa8.41□□□□□ -1.06
HMGXB4-202ENST00000418170 CPOXP36551 454 aa8.41□□□□□ -1.06
HMGXB4-202ENST00000418170 CETN1Q12798 172 aa8.41□□□□□ -1.06
HMGXB4-202ENST00000418170 EFTUD2Q15029 972 aaKnown RBP eCLIP8.41□□□□□ -1.067e-13■■■■■ 47.1
HMGXB4-202ENST00000418170 MYLK3Q32MK0 819 aa8.41□□□□□ -1.06
HMGXB4-202ENST00000418170 EPC2Q52LR7 807 aa8.41□□□□□ -1.06
HMGXB4-202ENST00000418170 MDH1BQ5I0G3 518 aa8.41□□□□□ -1.06
HMGXB4-202ENST00000418170 LRRC8BQ6P9F7 803 aa8.41□□□□□ -1.06
HMGXB4-202ENST00000418170 PRPF39Q86UA1 669 aaKnown RBP8.41□□□□□ -1.06
HMGXB4-202ENST00000418170 BBS5Q8N3I7 341 aa8.41□□□□□ -1.06
HMGXB4-202ENST00000418170 GLIS1Q8NBF1 620 aa8.41□□□□□ -1.06
HMGXB4-202ENST00000418170 ICA1LQ8NDH6 482 aa8.41□□□□□ -1.06
HMGXB4-202ENST00000418170 KAT5Q92993 513 aa8.41□□□□□ -1.06
HMGXB4-202ENST00000418170 HSPBAP1Q96EW2 488 aa8.41□□□□□ -1.06
HMGXB4-202ENST00000418170 PSTPIP2Q9H939 334 aa8.41□□□□□ -1.06
HMGXB4-202ENST00000418170 CNTN3Q9P232 1028 aa8.41□□□□□ -1.06
HMGXB4-202ENST00000418170 SAP30BPQ9UHR5 308 aaKnown RBP8.41□□□□□ -1.06
HMGXB4-202ENST00000418170 SOX13Q9UN79 622 aa8.41□□□□□ -1.06
HMGXB4-202ENST00000418170 LZTS1Q9Y250 596 aa8.41□□□□□ -1.06
HMGXB4-202ENST00000418170 ATP2A1O14983 1001 aa8.4□□□□□ -1.06
HMGXB4-202ENST00000418170 CYP26A1O43174 497 aa8.4□□□□□ -1.06
HMGXB4-202ENST00000418170 LPXNO60711 386 aa8.4□□□□□ -1.06
HMGXB4-202ENST00000418170 TRMUO75648 421 aaKnown RBP8.4□□□□□ -1.06
HMGXB4-202ENST00000418170 HIRAP54198 1017 aaPredicted RBP8.4□□□□□ -1.06
HMGXB4-202ENST00000418170 IRX4P78413 519 aa8.4□□□□□ -1.06
HMGXB4-202ENST00000418170 TLR1Q15399 786 aa8.4□□□□□ -1.06
HMGXB4-202ENST00000418170 EAPPQ56P03 285 aaPredicted RBP8.4□□□□□ -1.06
HMGXB4-202ENST00000418170 MYCT1Q8N699 235 aa8.4□□□□□ -1.06
HMGXB4-202ENST00000418170 JADE3Q92613 823 aa8.4□□□□□ -1.06
HMGXB4-202ENST00000418170 PAFAH2Q99487 392 aa8.4□□□□□ -1.06
HMGXB4-202ENST00000418170 CCDC106Q9BWC9 280 aa8.4□□□□□ -1.06
HMGXB4-202ENST00000418170 ANO3Q9BYT9 981 aa8.4□□□□□ -1.06
HMGXB4-202ENST00000418170 FHDC1Q9C0D6 1143 aaPredicted RBP8.4□□□□□ -1.06
HMGXB4-202ENST00000418170 STRIP2Q9ULQ0 834 aa8.4□□□□□ -1.06
HMGXB4-202ENST00000418170 CLUHO75153 1309 aa8.4□□□□□ -1.06
HMGXB4-202ENST00000418170 EMSYQ7Z589 1322 aa8.4□□□□□ -1.06
HMGXB4-202ENST00000418170 BOLA2-SMG1P6H3BVE0 249 aa8.4□□□□□ -1.06
HMGXB4-202ENST00000418170 P4HA2O15460 535 aa8.4□□□□□ -1.06
HMGXB4-202ENST00000418170 STK10O94804 968 aaKnown RBP8.4□□□□□ -1.06
HMGXB4-202ENST00000418170 FAM13AO94988 1023 aa8.4□□□□□ -1.06
HMGXB4-202ENST00000418170 SNHG28P0DPA3 235 aa8.4□□□□□ -1.06
HMGXB4-202ENST00000418170 FDFT1P37268 417 aa8.4□□□□□ -1.06
HMGXB4-202ENST00000418170 MLH1P40692 756 aa8.4□□□□□ -1.06
HMGXB4-202ENST00000418170 NOP14P78316 857 aaKnown RBP8.4□□□□□ -1.06
HMGXB4-202ENST00000418170 GSTM4Q03013 218 aa8.4□□□□□ -1.06
HMGXB4-202ENST00000418170 SNAPC2Q13487 334 aa8.4□□□□□ -1.06
HMGXB4-202ENST00000418170 CCNIQ14094 377 aa8.4□□□□□ -1.06
HMGXB4-202ENST00000418170 LPIN1Q14693 890 aa8.4□□□□□ -1.06
HMGXB4-202ENST00000418170 TRIP10Q15642 601 aa8.4□□□□□ -1.06
HMGXB4-202ENST00000418170 RINT1Q6NUQ1 792 aa8.4□□□□□ -1.06
HMGXB4-202ENST00000418170 SLC9A9Q8IVB4 645 aa8.4□□□□□ -1.06
HMGXB4-202ENST00000418170 SHKBP1Q8TBC3 707 aa8.4□□□□□ -1.06
HMGXB4-202ENST00000418170 SLC26A7Q8TE54 656 aa8.4□□□□□ -1.06
HMGXB4-202ENST00000418170 KLF6Q99612 283 aaPredicted RBP8.4□□□□□ -1.06
HMGXB4-202ENST00000418170 CORO1BQ9BR76 489 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms