RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 IL21Q9HBE4 155 aa27.21■■□□□ 1.95
VEGFA-208ENST00000417285 SIX4Q9UIU6 781 aa27.21■■□□□ 1.95
VEGFA-208ENST00000417285 PVALEFA0A1B0GWK0 134 aa27.2■■□□□ 1.94
VEGFA-208ENST00000417285 PRPF40AO75400 957 aaKnown RBP27.2■■□□□ 1.94
VEGFA-208ENST00000417285 DMDP11532 3685 aa27.2■■□□□ 1.94
VEGFA-208ENST00000417285 PCSK1P29120 753 aa27.2■■□□□ 1.94
VEGFA-208ENST00000417285 RPL10AP62906 217 aaKnown RBP27.2■■□□□ 1.94
VEGFA-208ENST00000417285 CBWD2Q8IUF1 395 aa27.2■■□□□ 1.94
VEGFA-208ENST00000417285 CEP57L1Q8IYX8 460 aa27.2■■□□□ 1.94
VEGFA-208ENST00000417285 NDRG2Q9UN36 371 aaKnown RBP27.2■■□□□ 1.94
VEGFA-208ENST00000417285 UBE4BO95155 1302 aa27.19■■□□□ 1.94
VEGFA-208ENST00000417285 CSH1P0DML2 217 aa27.19■■□□□ 1.94
VEGFA-208ENST00000417285 CSH2P0DML3 217 aa27.19■■□□□ 1.94
VEGFA-208ENST00000417285 CDR1P51861 262 aa27.19■■□□□ 1.94
VEGFA-208ENST00000417285 PLCB2Q00722 1185 aa27.19■■□□□ 1.94
VEGFA-208ENST00000417285 INTS6LQ5JSJ4 861 aaKnown RBP27.19■■□□□ 1.94
VEGFA-208ENST00000417285 WDR49Q8IV35 697 aa27.19■■□□□ 1.94
VEGFA-208ENST00000417285 ATRIPQ8WXE1 791 aa27.19■■□□□ 1.94
VEGFA-208ENST00000417285 HPDLQ96IR7 371 aa27.19■■□□□ 1.94
VEGFA-208ENST00000417285 FAM126AQ9BYI3 521 aaPredicted RBP27.19■■□□□ 1.94
VEGFA-208ENST00000417285 TMLHEQ9NVH6 421 aa27.19■■□□□ 1.94
VEGFA-208ENST00000417285 THG1LQ9NWX6 298 aaKnown RBP27.19■■□□□ 1.94
VEGFA-208ENST00000417285 CGNQ9P2M7 1197 aaKnown RBP27.19■■□□□ 1.94
VEGFA-208ENST00000417285 PCDHGA2Q9Y5H1 932 aa27.19■■□□□ 1.94
VEGFA-208ENST00000417285 GABRDO14764 452 aa27.18■■□□□ 1.94
VEGFA-208ENST00000417285 KINO60870 393 aaKnown RBP27.18■■□□□ 1.94
VEGFA-208ENST00000417285 DDX6P26196 483 aaKnown RBP eCLIP27.18■■□□□ 1.945e-8■□□□□ 10.5
VEGFA-208ENST00000417285 KPNA1P52294 538 aaPredicted RBP27.18■■□□□ 1.94
VEGFA-208ENST00000417285 EHHADHQ08426 723 aa27.18■■□□□ 1.94
VEGFA-208ENST00000417285 HS2ST1Q7LGA3 356 aa27.18■■□□□ 1.94
VEGFA-208ENST00000417285 GPIHBP1Q8IV16 184 aa27.18■■□□□ 1.94
VEGFA-208ENST00000417285 CELF5Q8N6W0 485 aaKnown RBP27.18■■□□□ 1.94
VEGFA-208ENST00000417285 PI4K2AQ9BTU6 479 aa27.18■■□□□ 1.94
VEGFA-208ENST00000417285 SLC46A2Q9BY10 475 aa27.18■■□□□ 1.94
VEGFA-208ENST00000417285 BLZF1Q9H2G9 400 aa27.18■■□□□ 1.94
VEGFA-208ENST00000417285 CHRDQ9H2X0 955 aa27.18■■□□□ 1.94
VEGFA-208ENST00000417285 LMAN1LQ9HAT1 526 aa27.18■■□□□ 1.94
VEGFA-208ENST00000417285 AGPAT3Q9NRZ7 376 aa27.18■■□□□ 1.94
VEGFA-208ENST00000417285 TSC2P49815 1807 aa27.18■■□□□ 1.94
VEGFA-208ENST00000417285 TGFB1I1O43294 461 aa27.17■■□□□ 1.94
VEGFA-208ENST00000417285 HMGA1P17096 107 aaKnown RBP27.17■■□□□ 1.94
VEGFA-208ENST00000417285 CCNE1P24864 410 aa27.17■■□□□ 1.94
VEGFA-208ENST00000417285 AFMP43652 599 aa27.17■■□□□ 1.94
VEGFA-208ENST00000417285 KRT85P78386 507 aa27.17■■□□□ 1.94
VEGFA-208ENST00000417285 MTAPQ13126 283 aa27.17■■□□□ 1.94
VEGFA-208ENST00000417285 PPP2R5DQ14738 602 aa27.17■■□□□ 1.94
VEGFA-208ENST00000417285 SNRNP35Q16560 246 aaKnown RBP27.17■■□□□ 1.94
VEGFA-208ENST00000417285 SOWAHAQ2M3V2 549 aa27.17■■□□□ 1.94
VEGFA-208ENST00000417285 LIMS2Q7Z4I7 341 aa27.17■■□□□ 1.94
VEGFA-208ENST00000417285 ADGRF2Q8IZF7 708 aa27.17■■□□□ 1.94
VEGFA-208ENST00000417285 CMTM8Q8IZV2 173 aa27.17■■□□□ 1.94
VEGFA-208ENST00000417285 OR5B17Q8NGF7 314 aa27.17■■□□□ 1.94
VEGFA-208ENST00000417285 BPIFB1Q8TDL5 484 aa27.17■■□□□ 1.94
VEGFA-208ENST00000417285 LRRC3BQ96PB8 259 aa27.17■■□□□ 1.94
VEGFA-208ENST00000417285 ZSCAN32Q9NX65 697 aa27.17■■□□□ 1.94
VEGFA-208ENST00000417285 GTF3C4Q9UKN8 822 aa27.17■■□□□ 1.94
VEGFA-208ENST00000417285 MIA3Q5JRA6 1907 aa27.17■■□□□ 1.94
VEGFA-208ENST00000417285 NCANO14594 1321 aa27.16■■□□□ 1.94
VEGFA-208ENST00000417285 F11P03951 625 aa27.16■■□□□ 1.94
VEGFA-208ENST00000417285 CASP1P29466 404 aa27.16■■□□□ 1.94
VEGFA-208ENST00000417285 NLRP12P59046 1061 aa27.16■■□□□ 1.94
VEGFA-208ENST00000417285 CYP4F8P98187 520 aa27.16■■□□□ 1.94
VEGFA-208ENST00000417285 CFAP221Q4G0U5 840 aa27.16■■□□□ 1.94
VEGFA-208ENST00000417285 SCARA3Q6AZY7 606 aa27.16■■□□□ 1.94
VEGFA-208ENST00000417285 RALGPS2Q86X27 583 aaPredicted RBP27.16■■□□□ 1.94
VEGFA-208ENST00000417285 XXYLT1Q8NBI6 393 aa27.16■■□□□ 1.94
VEGFA-208ENST00000417285 SCFD1Q8WVM8 642 aa27.16■■□□□ 1.94
VEGFA-208ENST00000417285 FUBP3Q96I24 572 aaKnown RBP eCLIP27.16■■□□□ 1.94
VEGFA-208ENST00000417285 SPATA32Q96LK8 384 aa27.16■■□□□ 1.94
VEGFA-208ENST00000417285 FNBP1Q96RU3 617 aa27.16■■□□□ 1.94
VEGFA-208ENST00000417285 PKMYT1Q99640 499 aa27.16■■□□□ 1.94
VEGFA-208ENST00000417285 PRMT8Q9NR22 394 aaPredicted RBP27.16■■□□□ 1.94
VEGFA-208ENST00000417285 UXTQ9UBK9 157 aaPredicted RBP27.16■■□□□ 1.94
VEGFA-208ENST00000417285 COL4A3Q01955 1670 aa27.15■■□□□ 1.94
VEGFA-208ENST00000417285 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP27.15■■□□□ 1.94
VEGFA-208ENST00000417285 FAM163BP0C2L3 166 aa27.15■■□□□ 1.94
VEGFA-208ENST00000417285 SLFN14P0C7P3 912 aa27.15■■□□□ 1.94
VEGFA-208ENST00000417285 ACAT1P24752 427 aaKnown RBP27.15■■□□□ 1.94
VEGFA-208ENST00000417285 CYP2F1P24903 491 aa27.15■■□□□ 1.94
VEGFA-208ENST00000417285 AVPR1AP37288 418 aa27.15■■□□□ 1.94
VEGFA-208ENST00000417285 NRLP54845 237 aa27.15■■□□□ 1.94
VEGFA-208ENST00000417285 CUL4BQ13620 913 aa27.15■■□□□ 1.94
VEGFA-208ENST00000417285 LMBRD2Q68DH5 695 aaPredicted RBP27.15■■□□□ 1.94
VEGFA-208ENST00000417285 SPATA2LQ8IUW3 424 aaPredicted RBP27.15■■□□□ 1.94
VEGFA-208ENST00000417285 RDH13Q8NBN7 331 aa27.15■■□□□ 1.94
VEGFA-208ENST00000417285 ZBTB44Q8NCP5 570 aa27.15■■□□□ 1.94
VEGFA-208ENST00000417285 MRPS31Q92665 395 aaKnown RBP27.15■■□□□ 1.94
VEGFA-208ENST00000417285 NELL1Q92832 810 aa27.15■■□□□ 1.94
VEGFA-208ENST00000417285 FAM84AQ96KN4 292 aa27.15■■□□□ 1.94
VEGFA-208ENST00000417285 SERTAD1Q9UHV2 236 aa27.15■■□□□ 1.94
VEGFA-208ENST00000417285 MYBPHLA2RUH7 354 aa27.14■■□□□ 1.94
VEGFA-208ENST00000417285 TNNI1P19237 187 aa27.14■■□□□ 1.94
VEGFA-208ENST00000417285 LRRC32Q14392 662 aa27.14■■□□□ 1.94
VEGFA-208ENST00000417285 PSMD6Q15008 389 aa27.14■■□□□ 1.94
VEGFA-208ENST00000417285 MAPRE1Q15691 268 aaKnown RBP27.14■■□□□ 1.94
VEGFA-208ENST00000417285 BMT2Q1RMZ1 405 aa27.14■■□□□ 1.94
VEGFA-208ENST00000417285 FAM171BQ6P995 826 aa27.14■■□□□ 1.94
VEGFA-208ENST00000417285 C4orf50Q6ZRC1 276 aa27.14■■□□□ 1.94
VEGFA-208ENST00000417285 TRAPPC11Q7Z392 1133 aa27.14■■□□□ 1.94
VEGFA-208ENST00000417285 TMEM150AQ86TG1 271 aa27.14■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms