RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 TRIM68Q6AZZ1 485 aa16.62■□□□□ 0.25
DDX56-202ENST00000415758 SLFN12LQ6IEE8 588 aa16.62■□□□□ 0.25
DDX56-202ENST00000415758 GPBP1Q86WP2 473 aa16.62■□□□□ 0.25
DDX56-202ENST00000415758 DCP1BQ8IZD4 617 aaKnown RBP16.62■□□□□ 0.25
DDX56-202ENST00000415758 KIF2CQ99661 725 aa16.62■□□□□ 0.25
DDX56-202ENST00000415758 BLOC1S4Q9NUP1 217 aa16.62■□□□□ 0.25
DDX56-202ENST00000415758 DPP3Q9NY33 737 aa16.62■□□□□ 0.25
DDX56-202ENST00000415758 LAMA1P25391 3075 aa16.61■□□□□ 0.25
DDX56-202ENST00000415758 KPNA7A9QM74 516 aa16.61■□□□□ 0.25
DDX56-202ENST00000415758 ANKRD63C9JTQ0 380 aa16.61■□□□□ 0.25
DDX56-202ENST00000415758 RNF40O75150 1001 aa16.61■□□□□ 0.25
DDX56-202ENST00000415758 FAM13AO94988 1023 aa16.61■□□□□ 0.25
DDX56-202ENST00000415758 KCNK5O95279 499 aa16.61■□□□□ 0.25
DDX56-202ENST00000415758 NMT1P30419 496 aaKnown RBP16.61■□□□□ 0.25
DDX56-202ENST00000415758 MPLP40238 635 aa16.61■□□□□ 0.25
DDX56-202ENST00000415758 PDGFRLQ15198 375 aa16.61■□□□□ 0.25
DDX56-202ENST00000415758 TXNDC8Q6A555 127 aa16.61■□□□□ 0.25
DDX56-202ENST00000415758 SYT13Q7L8C5 426 aa16.61■□□□□ 0.25
DDX56-202ENST00000415758 RIN3Q8TB24 985 aa16.61■□□□□ 0.25
DDX56-202ENST00000415758 LRRC15Q8TF66 581 aa16.61■□□□□ 0.25
DDX56-202ENST00000415758 EXOC4Q96A65 974 aa16.61■□□□□ 0.25
DDX56-202ENST00000415758 DUSP15Q9H1R2 295 aaPredicted RBP16.61■□□□□ 0.25
DDX56-202ENST00000415758 ST6GALNAC4Q9H4F1 302 aa16.61■□□□□ 0.25
DDX56-202ENST00000415758 ABI2Q9NYB9 513 aaPredicted RBP16.61■□□□□ 0.25
DDX56-202ENST00000415758 EBF1Q9UH73 591 aa16.61■□□□□ 0.25
DDX56-202ENST00000415758 KIF3AQ9Y496 699 aa16.61■□□□□ 0.25
DDX56-202ENST00000415758 PCDHB5Q9Y5E4 795 aa16.61■□□□□ 0.25
DDX56-202ENST00000415758 CSH1P0DML2 217 aa16.6■□□□□ 0.25
DDX56-202ENST00000415758 CSH2P0DML3 217 aa16.6■□□□□ 0.25
DDX56-202ENST00000415758 KCNA4P22459 653 aa16.6■□□□□ 0.25
DDX56-202ENST00000415758 GJA4P35212 333 aa16.6■□□□□ 0.25
DDX56-202ENST00000415758 CDR1P51861 262 aa16.6■□□□□ 0.25
DDX56-202ENST00000415758 ADALQ6DHV7 355 aa16.6■□□□□ 0.25
DDX56-202ENST00000415758 MCTP1Q6DN14 999 aa16.6■□□□□ 0.25
DDX56-202ENST00000415758 CC2D1AQ6P1N0 951 aaPredicted RBP16.6■□□□□ 0.25
DDX56-202ENST00000415758 CRELD2Q6UXH1 353 aaPredicted RBP16.6■□□□□ 0.25
DDX56-202ENST00000415758 NT5DC4Q86YG4 428 aa16.6■□□□□ 0.25
DDX56-202ENST00000415758 LEO1Q8WVC0 666 aaPredicted RBP16.6■□□□□ 0.25
DDX56-202ENST00000415758 MRPS31Q92665 395 aaKnown RBP16.6■□□□□ 0.25
DDX56-202ENST00000415758 CALML4Q96GE6 196 aa16.6■□□□□ 0.25
DDX56-202ENST00000415758 MYRFLQ96LU7 910 aa16.6■□□□□ 0.25
DDX56-202ENST00000415758 P2RY13Q9BPV8 354 aa16.6■□□□□ 0.25
DDX56-202ENST00000415758 AGO2Q9UKV8 859 aaKnown RBP16.6■□□□□ 0.25
DDX56-202ENST00000415758 CEP295Q9C0D2 2601 aa16.59■□□□□ 0.25
DDX56-202ENST00000415758 ARSAP15289 507 aa16.59■□□□□ 0.25
DDX56-202ENST00000415758 UBA7P41226 1012 aa16.59■□□□□ 0.25
DDX56-202ENST00000415758 NFE2Q16621 373 aaPredicted RBP16.59■□□□□ 0.25
DDX56-202ENST00000415758 SV2CQ496J9 727 aa16.59■□□□□ 0.25
DDX56-202ENST00000415758 TRMT2BQ96GJ1 504 aaKnown RBP16.59■□□□□ 0.25
DDX56-202ENST00000415758 ACBD6Q9BR61 282 aa16.59■□□□□ 0.25
DDX56-202ENST00000415758 ECT2Q9H8V3 914 aa16.59■□□□□ 0.25
DDX56-202ENST00000415758 ABCB6Q9NP58 842 aa16.59■□□□□ 0.25
DDX56-202ENST00000415758 TMLHEQ9NVH6 421 aa16.59■□□□□ 0.25
DDX56-202ENST00000415758 POLR3BQ9NW08 1133 aaPredicted RBP16.59■□□□□ 0.25
DDX56-202ENST00000415758 UXTQ9UBK9 157 aaPredicted RBP16.59■□□□□ 0.25
DDX56-202ENST00000415758 TISP43B9A030 160 aa16.58■□□□□ 0.24
DDX56-202ENST00000415758 PRPF40AO75400 957 aaKnown RBP16.58■□□□□ 0.24
DDX56-202ENST00000415758 NOL4O94818 638 aa16.58■□□□□ 0.24
DDX56-202ENST00000415758 RHOBTB1O94844 696 aa16.58■□□□□ 0.24
DDX56-202ENST00000415758 PNPLA4P41247 253 aa16.58■□□□□ 0.24
DDX56-202ENST00000415758 FAM160A1Q05DH4 1040 aa16.58■□□□□ 0.24
DDX56-202ENST00000415758 DHX8Q14562 1220 aaKnown RBP16.58■□□□□ 0.24
DDX56-202ENST00000415758 MCM6Q14566 821 aa16.58■□□□□ 0.24
DDX56-202ENST00000415758 KARSQ15046 597 aaKnown RBP16.58■□□□□ 0.24
DDX56-202ENST00000415758 ELF2Q15723 593 aa16.58■□□□□ 0.24
DDX56-202ENST00000415758 ZC2HC1CQ53FD0 456 aaPredicted RBP16.58■□□□□ 0.24
DDX56-202ENST00000415758 RNF43Q68DV7 783 aa16.58■□□□□ 0.24
DDX56-202ENST00000415758 EFCAB13Q8IY85 973 aa16.58■□□□□ 0.24
DDX56-202ENST00000415758 OSCP1Q8WVF1 389 aa16.58■□□□□ 0.24
DDX56-202ENST00000415758 RAD54LQ92698 747 aa16.58■□□□□ 0.24
DDX56-202ENST00000415758 EZH1Q92800 747 aaPredicted RBP16.58■□□□□ 0.24
DDX56-202ENST00000415758 ZNF560Q96MR9 790 aa16.58■□□□□ 0.24
DDX56-202ENST00000415758 HHIPQ96QV1 700 aa16.58■□□□□ 0.24
DDX56-202ENST00000415758 SMOC1Q9H4F8 434 aa16.58■□□□□ 0.24
DDX56-202ENST00000415758 TMEM206Q9H813 350 aa16.58■□□□□ 0.24
DDX56-202ENST00000415758 MYO16Q9Y6X6 1858 aa16.57■□□□□ 0.24
DDX56-202ENST00000415758 KIAA1549LQ6ZVL6 1849 aa16.57■□□□□ 0.24
DDX56-202ENST00000415758 BCLAF3A2AJT9 711 aaKnown RBP16.57■□□□□ 0.24
DDX56-202ENST00000415758 TADA3O75528 432 aa16.57■□□□□ 0.24
DDX56-202ENST00000415758 IL18RAPO95256 599 aa16.57■□□□□ 0.24
DDX56-202ENST00000415758 APBB3O95704 486 aa16.57■□□□□ 0.24
DDX56-202ENST00000415758 ADSSP30520 456 aa16.57■□□□□ 0.24
DDX56-202ENST00000415758 GPR15P49685 360 aa16.57■□□□□ 0.24
DDX56-202ENST00000415758 RPL10AP62906 217 aaKnown RBP16.57■□□□□ 0.24
DDX56-202ENST00000415758 TSPY1Q01534 308 aa16.57■□□□□ 0.24
DDX56-202ENST00000415758 MTF1Q14872 753 aa16.57■□□□□ 0.24
DDX56-202ENST00000415758 POSTNQ15063 836 aa16.57■□□□□ 0.24
DDX56-202ENST00000415758 ZNF77Q15935 545 aa16.57■□□□□ 0.24
DDX56-202ENST00000415758 ZNF720Q7Z2F6 126 aa16.57■□□□□ 0.24
DDX56-202ENST00000415758 CPA6Q8N4T0 437 aa16.57■□□□□ 0.24
DDX56-202ENST00000415758 RPLP0P6Q8NHW5 317 aa16.57■□□□□ 0.24
DDX56-202ENST00000415758 ACDQ96AP0 544 aa16.57■□□□□ 0.24
DDX56-202ENST00000415758 PKMYT1Q99640 499 aa16.57■□□□□ 0.24
DDX56-202ENST00000415758 PI4K2AQ9BTU6 479 aa16.57■□□□□ 0.24
DDX56-202ENST00000415758 DUS2Q9NX74 493 aaKnown RBP16.57■□□□□ 0.24
DDX56-202ENST00000415758 PPP4R2Q9NY27 417 aa16.57■□□□□ 0.24
DDX56-202ENST00000415758 MAGED2Q9UNF1 606 aaPredicted RBP16.57■□□□□ 0.24
DDX56-202ENST00000415758 NUP205Q92621 2012 aa16.57■□□□□ 0.24
DDX56-202ENST00000415758 ANAPC1Q9H1A4 1944 aa16.57■□□□□ 0.24
DDX56-202ENST00000415758 FRYQ5TBA9 3013 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms