RNA–Protein interactions for RNA: ENST00000414861.6

RIF1-202, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-202ENST00000414861 LHX1P48742 406 aa10.28□□□□□ -0.76
RIF1-202ENST00000414861 KRT83P78385 493 aa10.28□□□□□ -0.76
RIF1-202ENST00000414861 C2CD6Q53TS8 623 aa10.28□□□□□ -0.76
RIF1-202ENST00000414861 TAS1R1Q7RTX1 841 aa10.28□□□□□ -0.76
RIF1-202ENST00000414861 KIAA1328Q86T90 577 aa10.28□□□□□ -0.76
RIF1-202ENST00000414861 WDTC1Q8N5D0 677 aa10.28□□□□□ -0.76
RIF1-202ENST00000414861 COLGALT1Q8NBJ5 622 aa10.28□□□□□ -0.76
RIF1-202ENST00000414861 IGSF21Q96ID5 467 aa10.28□□□□□ -0.76
RIF1-202ENST00000414861 SLC9A7Q96T83 725 aa10.28□□□□□ -0.76
RIF1-202ENST00000414861 SYT15Q9BQS2 421 aa10.28□□□□□ -0.76
RIF1-202ENST00000414861 LZTFL1Q9NQ48 299 aa10.28□□□□□ -0.76
RIF1-202ENST00000414861 CYTH4Q9UIA0 394 aa10.28□□□□□ -0.76
RIF1-202ENST00000414861 TSPAN16Q9UKR8 245 aa10.28□□□□□ -0.76
RIF1-202ENST00000414861 PCDHGC3Q9UN70 934 aa10.28□□□□□ -0.76
RIF1-202ENST00000414861 MYO7AQ13402 2215 aa10.28□□□□□ -0.76
RIF1-202ENST00000414861 MYBPHLA2RUH7 354 aa10.28□□□□□ -0.76
RIF1-202ENST00000414861 M0QYV0 167 aa10.28□□□□□ -0.76
RIF1-202ENST00000414861 ATMINO43313 823 aaPredicted RBP10.28□□□□□ -0.76
RIF1-202ENST00000414861 FAM163BP0C2L3 166 aa10.28□□□□□ -0.76
RIF1-202ENST00000414861 ABCB4P21439 1286 aa10.28□□□□□ -0.76
RIF1-202ENST00000414861 PAX3P23760 479 aa10.28□□□□□ -0.76
RIF1-202ENST00000414861 RABGGTBP53611 331 aa10.28□□□□□ -0.76
RIF1-202ENST00000414861 CENPCQ03188 943 aa10.28□□□□□ -0.76
RIF1-202ENST00000414861 YWHAHQ04917 246 aaPredicted RBP10.28□□□□□ -0.76
RIF1-202ENST00000414861 GOLGA7BQ2TAP0 167 aa10.28□□□□□ -0.76
RIF1-202ENST00000414861 MDH1BQ5I0G3 518 aa10.28□□□□□ -0.76
RIF1-202ENST00000414861 RTP2Q5QGT7 225 aa10.28□□□□□ -0.76
RIF1-202ENST00000414861 TTC30AQ86WT1 665 aa10.28□□□□□ -0.76
RIF1-202ENST00000414861 CEP57Q86XR8 500 aa10.28□□□□□ -0.76
RIF1-202ENST00000414861 SLC39A11Q8N1S5 342 aa10.28□□□□□ -0.76
RIF1-202ENST00000414861 ZNF558Q96NG5 402 aa10.28□□□□□ -0.76
RIF1-202ENST00000414861 ZBED2Q9BTP6 218 aa10.28□□□□□ -0.76
RIF1-202ENST00000414861 PDCL3Q9H2J4 239 aa10.28□□□□□ -0.76
RIF1-202ENST00000414861 SALL4Q9UJQ4 1053 aa10.28□□□□□ -0.76
RIF1-202ENST00000414861 DSEQ9UL01 958 aa10.28□□□□□ -0.76
RIF1-202ENST00000414861 NR2E3Q9Y5X4 410 aa10.28□□□□□ -0.76
RIF1-202ENST00000414861 GRXCR1A8MXD5 290 aa10.27□□□□□ -0.77
RIF1-202ENST00000414861 CLDN5O00501 218 aa10.27□□□□□ -0.77
RIF1-202ENST00000414861 SYN3O14994 580 aa10.27□□□□□ -0.77
RIF1-202ENST00000414861 ZSCAN12O43309 604 aa10.27□□□□□ -0.77
RIF1-202ENST00000414861 TRAPPC3O43617 180 aa10.27□□□□□ -0.77
RIF1-202ENST00000414861 ARHGEF15O94989 841 aa10.27□□□□□ -0.77
RIF1-202ENST00000414861 FTLP02792 175 aaPredicted RBP10.27□□□□□ -0.77
RIF1-202ENST00000414861 GZMAP12544 262 aa10.27□□□□□ -0.77
RIF1-202ENST00000414861 PTPN1P18031 435 aaKnown RBP10.27□□□□□ -0.77
RIF1-202ENST00000414861 LAG3P18627 525 aa10.27□□□□□ -0.77
RIF1-202ENST00000414861 FGFR3P22607 806 aa10.27□□□□□ -0.77
RIF1-202ENST00000414861 ADORA2BP29275 332 aa10.27□□□□□ -0.77
RIF1-202ENST00000414861 GALCP54803 685 aa10.27□□□□□ -0.77
RIF1-202ENST00000414861 SHHQ15465 462 aa10.27□□□□□ -0.77
RIF1-202ENST00000414861 VARS2Q5ST30 1063 aaKnown RBP10.27□□□□□ -0.77
RIF1-202ENST00000414861 LLGL2Q6P1M3 1020 aa10.27□□□□□ -0.77
RIF1-202ENST00000414861 LCLAT1Q6UWP7 414 aa10.27□□□□□ -0.77
RIF1-202ENST00000414861 SPRED2Q7Z698 418 aa10.27□□□□□ -0.77
RIF1-202ENST00000414861 LRRTM3Q86VH5 581 aa10.27□□□□□ -0.77
RIF1-202ENST00000414861 METTL23Q86XA0 190 aa10.27□□□□□ -0.77
RIF1-202ENST00000414861 RNF168Q8IYW5 571 aaPredicted RBP10.27□□□□□ -0.77
RIF1-202ENST00000414861 FUKQ8N0W3 1084 aa10.27□□□□□ -0.77
RIF1-202ENST00000414861 UBA3Q8TBC4 463 aa10.27□□□□□ -0.77
RIF1-202ENST00000414861 SPATA18Q8TC71 538 aa10.27□□□□□ -0.77
RIF1-202ENST00000414861 SLC2A14Q8TDB8 520 aa10.27□□□□□ -0.77
RIF1-202ENST00000414861 TNIP3Q96KP6 325 aa10.27□□□□□ -0.77
RIF1-202ENST00000414861 PKMYT1Q99640 499 aa10.27□□□□□ -0.77
RIF1-202ENST00000414861 IRX2Q9BZI1 471 aaPredicted RBP10.27□□□□□ -0.77
RIF1-202ENST00000414861 THAP2Q9H0W7 228 aa10.27□□□□□ -0.77
RIF1-202ENST00000414861 ISCUQ9H1K1 167 aa10.27□□□□□ -0.77
RIF1-202ENST00000414861 TMLHEQ9NVH6 421 aa10.27□□□□□ -0.77
RIF1-202ENST00000414861 TJP2Q9UDY2 1190 aa10.27□□□□□ -0.77
RIF1-202ENST00000414861 CHORDC1Q9UHD1 332 aaPredicted RBP10.27□□□□□ -0.77
RIF1-202ENST00000414861 INSL6Q9Y581 213 aa10.27□□□□□ -0.77
RIF1-202ENST00000414861 TULP2O00295 520 aa10.27□□□□□ -0.77
RIF1-202ENST00000414861 MED7O43513 233 aa10.27□□□□□ -0.77
RIF1-202ENST00000414861 TLL1O43897 1013 aa10.27□□□□□ -0.77
RIF1-202ENST00000414861 RTN2O75298 545 aa10.27□□□□□ -0.77
RIF1-202ENST00000414861 OAZ2O95190 189 aa10.27□□□□□ -0.77
RIF1-202ENST00000414861 OR4Q2P0C623 313 aa10.27□□□□□ -0.77
RIF1-202ENST00000414861 PCSK1P29120 753 aa10.27□□□□□ -0.77
RIF1-202ENST00000414861 CDH5P33151 784 aaPredicted RBP10.27□□□□□ -0.77
RIF1-202ENST00000414861 CNGA2Q16280 664 aa10.27□□□□□ -0.77
RIF1-202ENST00000414861 PKDCCQ504Y2 493 aa10.27□□□□□ -0.77
RIF1-202ENST00000414861 INTS6LQ5JSJ4 861 aaKnown RBP10.27□□□□□ -0.77
RIF1-202ENST00000414861 ARHGAP17Q68EM7 881 aa10.27□□□□□ -0.77
RIF1-202ENST00000414861 TRIM72Q6ZMU5 477 aa10.27□□□□□ -0.77
RIF1-202ENST00000414861 PAQR9Q6ZVX9 377 aa10.27□□□□□ -0.77
RIF1-202ENST00000414861 PHOSPHO2Q8TCD6 241 aa10.27□□□□□ -0.77
RIF1-202ENST00000414861 SP7Q8TDD2 431 aaPredicted RBP10.27□□□□□ -0.77
RIF1-202ENST00000414861 ARHGEF26Q96DR7 871 aa10.27□□□□□ -0.77
RIF1-202ENST00000414861 PCED1BQ96HM7 432 aa10.27□□□□□ -0.77
RIF1-202ENST00000414861 RNPC3Q96LT9 517 aaKnown RBP10.27□□□□□ -0.77
RIF1-202ENST00000414861 RAD9AQ99638 391 aa10.27□□□□□ -0.77
RIF1-202ENST00000414861 RHOBTB2Q9BYZ6 727 aa10.27□□□□□ -0.77
RIF1-202ENST00000414861 GTF3C4Q9UKN8 822 aa10.27□□□□□ -0.77
RIF1-202ENST00000414861 CDH9Q9ULB4 789 aa10.27□□□□□ -0.77
RIF1-202ENST00000414861 KIAA1257Q9ULG3 409 aa10.27□□□□□ -0.77
RIF1-202ENST00000414861 ARHGEF37A1IGU5 675 aa10.26□□□□□ -0.77
RIF1-202ENST00000414861 PJA2O43164 708 aa10.26□□□□□ -0.77
RIF1-202ENST00000414861 LSM8O95777 96 aaKnown RBP10.26□□□□□ -0.77
RIF1-202ENST00000414861 H2AFZP0C0S5 128 aa10.26□□□□□ -0.77
RIF1-202ENST00000414861 MYOGP15173 224 aa10.26□□□□□ -0.77
RIF1-202ENST00000414861 GPD2P43304 727 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms