RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 PSMG3-AS1Q96PY0 264 aa5.4□□□□□ -1.54
VPS41-205ENST00000414632 HSD17B14Q9BPX1 270 aa5.4□□□□□ -1.54
VPS41-205ENST00000414632 FDXACB1Q9BRP7 624 aaPredicted RBP5.4□□□□□ -1.54
VPS41-205ENST00000414632 ASPNQ9BXN1 380 aa5.4□□□□□ -1.54
VPS41-205ENST00000414632 PRDM14Q9GZV8 571 aa5.4□□□□□ -1.54
VPS41-205ENST00000414632 ADAMTS10Q9H324 1103 aa5.4□□□□□ -1.54
VPS41-205ENST00000414632 SEMA6BQ9H3T3 888 aa5.4□□□□□ -1.54
VPS41-205ENST00000414632 PRDM12Q9H4Q4 367 aa5.4□□□□□ -1.54
VPS41-205ENST00000414632 NOL6Q9H6R4 1146 aaKnown RBP5.4□□□□□ -1.54
VPS41-205ENST00000414632 GPRC5CQ9NQ84 441 aa5.4□□□□□ -1.54
VPS41-205ENST00000414632 XPNPEP1Q9NQW7 623 aa5.4□□□□□ -1.54
VPS41-205ENST00000414632 DDX19AQ9NUU7 478 aaKnown RBP5.4□□□□□ -1.54
VPS41-205ENST00000414632 MSRAQ9UJ68 235 aa5.4□□□□□ -1.54
VPS41-205ENST00000414632 ST3GAL5Q9UNP4 418 aa5.4□□□□□ -1.54
VPS41-205ENST00000414632 TNPO3Q9Y5L0 923 aaKnown RBP5.4□□□□□ -1.54
VPS41-205ENST00000414632 FHOD1Q9Y613 1164 aa5.4□□□□□ -1.54
VPS41-205ENST00000414632 TRIP11Q15643 1979 aa5.4□□□□□ -1.55
VPS41-205ENST00000414632 UNC80Q8N2C7 3258 aa5.39□□□□□ -1.55
VPS41-205ENST00000414632 IGKV6-21A0A0C4DH24 114 aa5.39□□□□□ -1.55
VPS41-205ENST00000414632 DENND3A2RUS2 1198 aa5.39□□□□□ -1.55
VPS41-205ENST00000414632 EPOPA6NHQ4 379 aa5.39□□□□□ -1.55
VPS41-205ENST00000414632 GNB5O14775 395 aa5.39□□□□□ -1.55
VPS41-205ENST00000414632 WIPF1O43516 503 aa5.39□□□□□ -1.55
VPS41-205ENST00000414632 GAS2O43903 313 aaKnown RBP5.39□□□□□ -1.55
VPS41-205ENST00000414632 EFCAB14O75071 495 aa5.39□□□□□ -1.55
VPS41-205ENST00000414632 LRRN2O75325 713 aa5.39□□□□□ -1.55
VPS41-205ENST00000414632 GJB5O95377 273 aa5.39□□□□□ -1.55
VPS41-205ENST00000414632 PDCP20941 246 aa5.39□□□□□ -1.55
VPS41-205ENST00000414632 PMLP29590 882 aa5.39□□□□□ -1.55
VPS41-205ENST00000414632 MARCKSP29966 332 aaPredicted RBP5.39□□□□□ -1.55
VPS41-205ENST00000414632 HOXC12P31275 282 aa5.39□□□□□ -1.55
VPS41-205ENST00000414632 RARRES1P49788 294 aa5.39□□□□□ -1.55
VPS41-205ENST00000414632 DNM2P50570 870 aa5.39□□□□□ -1.55
VPS41-205ENST00000414632 CRYBB1P53674 252 aaPredicted RBP5.39□□□□□ -1.55
VPS41-205ENST00000414632 TAP1Q03518 808 aa5.39□□□□□ -1.55
VPS41-205ENST00000414632 ORC2Q13416 577 aaPredicted RBP5.39□□□□□ -1.55
VPS41-205ENST00000414632 RAB30Q15771 203 aa5.39□□□□□ -1.55
VPS41-205ENST00000414632 LONRF3Q496Y0 759 aa5.39□□□□□ -1.55
VPS41-205ENST00000414632 PRRT3Q5FWE3 981 aa5.39□□□□□ -1.55
VPS41-205ENST00000414632 SPECC1Q5M775 1068 aa5.39□□□□□ -1.55
VPS41-205ENST00000414632 FAM102BQ5T8I3 360 aa5.39□□□□□ -1.55
VPS41-205ENST00000414632 KCNK18Q7Z418 384 aa5.39□□□□□ -1.55
VPS41-205ENST00000414632 BRAPQ7Z569 592 aa5.39□□□□□ -1.55
VPS41-205ENST00000414632 FGD2Q7Z6J4 655 aa5.39□□□□□ -1.55
VPS41-205ENST00000414632 FMNL3Q8IVF7 1028 aa5.39□□□□□ -1.55
VPS41-205ENST00000414632 AHI1Q8N157 1196 aa5.39□□□□□ -1.55
VPS41-205ENST00000414632 FIBCD1Q8N539 461 aa5.39□□□□□ -1.55
VPS41-205ENST00000414632 IGSF22Q8N9C0 903 aa5.39□□□□□ -1.55
VPS41-205ENST00000414632 RNF169Q8NCN4 708 aa5.39□□□□□ -1.55
VPS41-205ENST00000414632 GSTCDQ8NEC7 633 aa5.39□□□□□ -1.55
VPS41-205ENST00000414632 ERMNQ8TAM6 284 aa5.39□□□□□ -1.55
VPS41-205ENST00000414632 NEK9Q8TD19 979 aa5.39□□□□□ -1.55
VPS41-205ENST00000414632 FBLIM1Q8WUP2 373 aa5.39□□□□□ -1.55
VPS41-205ENST00000414632 RNF141Q8WVD5 230 aa5.39□□□□□ -1.55
VPS41-205ENST00000414632 PPM1EQ8WY54 764 aa5.39□□□□□ -1.55
VPS41-205ENST00000414632 ARNTL2Q8WYA1 636 aa5.39□□□□□ -1.55
VPS41-205ENST00000414632 KCTD13Q8WZ19 329 aa5.39□□□□□ -1.55
VPS41-205ENST00000414632 APBB2Q92870 758 aa5.39□□□□□ -1.55
VPS41-205ENST00000414632 CHAMP1Q96JM3 812 aa5.39□□□□□ -1.55
VPS41-205ENST00000414632 USP28Q96RU2 1077 aa5.39□□□□□ -1.55
VPS41-205ENST00000414632 CDX2Q99626 313 aaPredicted RBP5.39□□□□□ -1.55
VPS41-205ENST00000414632 ADAM2Q99965 735 aa5.39□□□□□ -1.55
VPS41-205ENST00000414632 C17orf80Q9BSJ5 609 aa5.39□□□□□ -1.55
VPS41-205ENST00000414632 MMTAG2Q9BU76 263 aaKnown RBP5.39□□□□□ -1.55
VPS41-205ENST00000414632 POLR3CQ9BUI4 534 aaPredicted RBP5.39□□□□□ -1.55
VPS41-205ENST00000414632 POLR3FQ9H1D9 316 aaPredicted RBP5.39□□□□□ -1.55
VPS41-205ENST00000414632 BHMT2Q9H2M3 363 aa5.39□□□□□ -1.55
VPS41-205ENST00000414632 SEMA6CQ9H3T2 930 aa5.39□□□□□ -1.55
VPS41-205ENST00000414632 DHX33Q9H6R0 707 aaKnown RBP5.39□□□□□ -1.55
VPS41-205ENST00000414632 MINDY3Q9H8M7 445 aa5.39□□□□□ -1.55
VPS41-205ENST00000414632 AKTIPQ9H8T0 292 aa5.39□□□□□ -1.55
VPS41-205ENST00000414632 SLC28A3Q9HAS3 691 aa5.39□□□□□ -1.55
VPS41-205ENST00000414632 ATP6V0A4Q9HBG4 840 aa5.39□□□□□ -1.55
VPS41-205ENST00000414632 ERVK-5Q9HDB9 667 aa5.39□□□□□ -1.55
VPS41-205ENST00000414632 TUFT1Q9NNX1 390 aa5.39□□□□□ -1.55
VPS41-205ENST00000414632 ANKEF1Q9NU02 776 aa5.39□□□□□ -1.55
VPS41-205ENST00000414632 MTMR10Q9NXD2 777 aa5.39□□□□□ -1.55
VPS41-205ENST00000414632 FAN1Q9Y2M0 1017 aa5.39□□□□□ -1.55
VPS41-205ENST00000414632 PCDHA11Q9Y5I1 949 aa5.39□□□□□ -1.55
VPS41-205ENST00000414632 KDM3AQ9Y4C1 1321 aa5.39□□□□□ -1.55
VPS41-205ENST00000414632 NPHP3-ACAD11A0A0J9YXS1 232 aa5.38□□□□□ -1.55
VPS41-205ENST00000414632 LINC01553A4QN01 128 aa5.38□□□□□ -1.55
VPS41-205ENST00000414632 ARHGEF35A5YM69 484 aa5.38□□□□□ -1.55
VPS41-205ENST00000414632 LRRIQ4A6NIV6 560 aa5.38□□□□□ -1.55
VPS41-205ENST00000414632 LAD1O00515 517 aa5.38□□□□□ -1.55
VPS41-205ENST00000414632 LYPLA2O95372 231 aa5.38□□□□□ -1.55
VPS41-205ENST00000414632 EYA4O95677 639 aa5.38□□□□□ -1.55
VPS41-205ENST00000414632 ASLP04424 464 aa5.38□□□□□ -1.55
VPS41-205ENST00000414632 RPLP2P05387 115 aaKnown RBP5.38□□□□□ -1.55
VPS41-205ENST00000414632 SNRPB2P08579 225 aaKnown RBP5.38□□□□□ -1.55
VPS41-205ENST00000414632 DARSP14868 501 aaKnown RBP5.38□□□□□ -1.55
VPS41-205ENST00000414632 FOSL2P15408 326 aa5.38□□□□□ -1.55
VPS41-205ENST00000414632 GLB1P16278 677 aa5.38□□□□□ -1.55
VPS41-205ENST00000414632 CPEP16870 476 aa5.38□□□□□ -1.55
VPS41-205ENST00000414632 POU3F2P20265 443 aaPredicted RBP5.38□□□□□ -1.55
VPS41-205ENST00000414632 GLRA2P23416 452 aa5.38□□□□□ -1.55
VPS41-205ENST00000414632 RPA1P27694 616 aa5.38□□□□□ -1.55
VPS41-205ENST00000414632 PRPHP41219 470 aa5.38□□□□□ -1.55
VPS41-205ENST00000414632 GFRA1P56159 465 aa5.38□□□□□ -1.55
VPS41-205ENST00000414632 LAMTOR4Q0VGL1 99 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms