RNA–Protein interactions for RNA: ENST00000414407.1

LINC00398-201, long intergenic non-protein coding RNA 398, humanhuman

TSL 2 BASIC

Gene LINC00398, Length 906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00398-201ENST00000414407 MTHFRP42898 656 aa17.58■□□□□ 0.4
LINC00398-201ENST00000414407 RAP1GAPP47736 663 aa17.58■□□□□ 0.4
LINC00398-201ENST00000414407 TUFMP49411 452 aaKnown RBP17.58■□□□□ 0.4
LINC00398-201ENST00000414407 YWHAEP62258 255 aaKnown RBP17.58■□□□□ 0.4
LINC00398-201ENST00000414407 CUL2Q13617 745 aa17.58■□□□□ 0.4
LINC00398-201ENST00000414407 IQCB1Q15051 598 aa17.58■□□□□ 0.4
LINC00398-201ENST00000414407 CLUL1Q15846 466 aa17.58■□□□□ 0.4
LINC00398-201ENST00000414407 CFAP221Q4G0U5 840 aa17.58■□□□□ 0.4
LINC00398-201ENST00000414407 ATAT1Q5SQI0 421 aa17.58■□□□□ 0.4
LINC00398-201ENST00000414407 SMYD5Q6GMV2 418 aa17.58■□□□□ 0.4
LINC00398-201ENST00000414407 PTCRAQ6ISU1 281 aaPredicted RBP17.58■□□□□ 0.4
LINC00398-201ENST00000414407 TMC5Q6UXY8 1006 aa17.58■□□□□ 0.4
LINC00398-201ENST00000414407 GBP6Q6ZN66 633 aa17.58■□□□□ 0.4
LINC00398-201ENST00000414407 C4orf50Q6ZRC1 276 aa17.58■□□□□ 0.4
LINC00398-201ENST00000414407 DHX40Q8IX18 779 aaKnown RBP17.58■□□□□ 0.4
LINC00398-201ENST00000414407 CRYBG2Q8N1P7 616 aa17.58■□□□□ 0.4
LINC00398-201ENST00000414407 ATAD1Q8NBU5 361 aa17.58■□□□□ 0.4
LINC00398-201ENST00000414407 MYCBPAPQ8TBZ2 947 aa17.58■□□□□ 0.4
LINC00398-201ENST00000414407 ZNF707Q96C28 371 aaPredicted RBP17.58■□□□□ 0.4
LINC00398-201ENST00000414407 RIPOR3Q96MK2 946 aa17.58■□□□□ 0.4
LINC00398-201ENST00000414407 INTS2Q9H0H0 1204 aaKnown RBP17.58■□□□□ 0.4
LINC00398-201ENST00000414407 HSD3B7Q9H2F3 369 aa17.58■□□□□ 0.4
LINC00398-201ENST00000414407 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.58■□□□□ 0.4
LINC00398-201ENST00000414407 TMLHEQ9NVH6 421 aa17.58■□□□□ 0.4
LINC00398-201ENST00000414407 LIMA1Q9UHB6 759 aaKnown RBP17.58■□□□□ 0.4
LINC00398-201ENST00000414407 GTF3C4Q9UKN8 822 aa17.58■□□□□ 0.4
LINC00398-201ENST00000414407 NME7Q9Y5B8 376 aa17.58■□□□□ 0.4
LINC00398-201ENST00000414407 INSL5Q9Y5Q6 135 aa17.58■□□□□ 0.4
LINC00398-201ENST00000414407 MYBPHLA2RUH7 354 aa17.57■□□□□ 0.4
LINC00398-201ENST00000414407 HCRTO43612 131 aa17.57■□□□□ 0.4
LINC00398-201ENST00000414407 CILPO75339 1184 aa17.57■□□□□ 0.4
LINC00398-201ENST00000414407 NDST1P52848 882 aa17.57■□□□□ 0.4
LINC00398-201ENST00000414407 GCNT1Q02742 428 aa17.57■□□□□ 0.4
LINC00398-201ENST00000414407 DUSP4Q13115 394 aa17.57■□□□□ 0.4
LINC00398-201ENST00000414407 PLD1Q13393 1074 aa17.57■□□□□ 0.4
LINC00398-201ENST00000414407 KRT31Q15323 416 aa17.57■□□□□ 0.4
LINC00398-201ENST00000414407 SMAD2Q15796 467 aaKnown RBP17.57■□□□□ 0.4
LINC00398-201ENST00000414407 EXOC3L4Q17RC7 722 aa17.57■□□□□ 0.4
LINC00398-201ENST00000414407 B3GALNT2Q8NCR0 500 aa17.57■□□□□ 0.4
LINC00398-201ENST00000414407 JAKMIP2Q96AA8 810 aa17.57■□□□□ 0.4
LINC00398-201ENST00000414407 FAM81BQ96LP2 452 aa17.57■□□□□ 0.4
LINC00398-201ENST00000414407 CRTAC1Q9NQ79 661 aa17.57■□□□□ 0.4
LINC00398-201ENST00000414407 GCNT4Q9P109 453 aa17.57■□□□□ 0.4
LINC00398-201ENST00000414407 USP15Q9Y4E8 981 aaPredicted RBP17.57■□□□□ 0.4
LINC00398-201ENST00000414407 BECN2A8MW95 431 aa17.56■□□□□ 0.4
LINC00398-201ENST00000414407 ATP2C2O75185 946 aa17.56■□□□□ 0.4
LINC00398-201ENST00000414407 LRG1P02750 347 aa17.56■□□□□ 0.4
LINC00398-201ENST00000414407 HAPLN1P10915 354 aaPredicted RBP17.56■□□□□ 0.4
LINC00398-201ENST00000414407 CDK11BP21127 795 aaKnown RBP17.56■□□□□ 0.4
LINC00398-201ENST00000414407 MAGEA11P43364 429 aa17.56■□□□□ 0.4
LINC00398-201ENST00000414407 PSMC1P62191 440 aaKnown RBP17.56■□□□□ 0.4
LINC00398-201ENST00000414407 CBX2Q14781 532 aaPredicted RBP17.56■□□□□ 0.4
LINC00398-201ENST00000414407 TRIM65Q6PJ69 517 aa17.56■□□□□ 0.4
LINC00398-201ENST00000414407 SPATA2LQ8IUW3 424 aaPredicted RBP17.56■□□□□ 0.4
LINC00398-201ENST00000414407 SMG7Q92540 1137 aaKnown RBP17.56■□□□□ 0.4
LINC00398-201ENST00000414407 APOL5Q9BWW9 433 aa17.56■□□□□ 0.4
LINC00398-201ENST00000414407 NT5C1AQ9BXI3 368 aa17.56■□□□□ 0.4
LINC00398-201ENST00000414407 CRISPLD1Q9H336 500 aa17.56■□□□□ 0.4
LINC00398-201ENST00000414407 DPEP3Q9H4B8 488 aa17.56■□□□□ 0.4
LINC00398-201ENST00000414407 CISHQ9NSE2 258 aa17.56■□□□□ 0.4
LINC00398-201ENST00000414407 ABI2Q9NYB9 513 aaPredicted RBP17.56■□□□□ 0.4
LINC00398-201ENST00000414407 YIPF1Q9Y548 306 aa17.56■□□□□ 0.4
LINC00398-201ENST00000414407 ASB3Q9Y575 518 aa17.56■□□□□ 0.4
LINC00398-201ENST00000414407 BMP1P13497 986 aa17.55■□□□□ 0.4
LINC00398-201ENST00000414407 CD58P19256 250 aa17.55■□□□□ 0.4
LINC00398-201ENST00000414407 ALDH1A3P47895 512 aa17.55■□□□□ 0.4
LINC00398-201ENST00000414407 KCNQ1P51787 676 aa17.55■□□□□ 0.4
LINC00398-201ENST00000414407 TWF1Q12792 350 aa17.55■□□□□ 0.4
LINC00398-201ENST00000414407 LRMPQ12912 555 aa17.55■□□□□ 0.4
LINC00398-201ENST00000414407 LRSAM1Q6UWE0 723 aa17.55■□□□□ 0.4
LINC00398-201ENST00000414407 VSTM1Q6UX27 236 aa17.55■□□□□ 0.4
LINC00398-201ENST00000414407 ENOSF1Q7L5Y1 443 aa17.55■□□□□ 0.4
LINC00398-201ENST00000414407 PPM1KQ8N3J5 372 aa17.55■□□□□ 0.4
LINC00398-201ENST00000414407 UBR7Q8N806 425 aa17.55■□□□□ 0.4
LINC00398-201ENST00000414407 WHAMMQ8TF30 809 aa17.55■□□□□ 0.4
LINC00398-201ENST00000414407 PCED1BQ96HM7 432 aa17.55■□□□□ 0.4
LINC00398-201ENST00000414407 CEP295NLQ96MC4 621 aa17.55■□□□□ 0.4
LINC00398-201ENST00000414407 ARID3AQ99856 593 aa17.55■□□□□ 0.4
LINC00398-201ENST00000414407 CRACR2AQ9BSW2 395 aa17.55■□□□□ 0.4
LINC00398-201ENST00000414407 PIDD1Q9HB75 910 aa17.55■□□□□ 0.4
LINC00398-201ENST00000414407 CBX8Q9HC52 389 aa17.55■□□□□ 0.4
LINC00398-201ENST00000414407 TAB2Q9NYJ8 693 aa17.55■□□□□ 0.4
LINC00398-201ENST00000414407 SLC27A5Q9Y2P5 690 aa17.55■□□□□ 0.4
LINC00398-201ENST00000414407 CCL16O15467 120 aa17.54■□□□□ 0.4
LINC00398-201ENST00000414407 SLC9A1P19634 815 aa17.54■□□□□ 0.4
LINC00398-201ENST00000414407 PON1P27169 355 aa17.54■□□□□ 0.4
LINC00398-201ENST00000414407 EPHB3P54753 998 aa17.54■□□□□ 0.4
LINC00398-201ENST00000414407 RPL10AP62906 217 aaKnown RBP17.54■□□□□ 0.4
LINC00398-201ENST00000414407 MGAT5BQ3V5L5 792 aa17.54■□□□□ 0.4
LINC00398-201ENST00000414407 MDH1BQ5I0G3 518 aa17.54■□□□□ 0.4
LINC00398-201ENST00000414407 TJAP1Q5JTD0 557 aa17.54■□□□□ 0.4
LINC00398-201ENST00000414407 PHLDB3Q6NSJ2 640 aa17.54■□□□□ 0.4
LINC00398-201ENST00000414407 ACOT1Q86TX2 421 aa17.54■□□□□ 0.4
LINC00398-201ENST00000414407 ELMOD1Q8N336 334 aa17.54■□□□□ 0.4
LINC00398-201ENST00000414407 FAM200AQ8TCP9 573 aa17.54■□□□□ 0.4
LINC00398-201ENST00000414407 MYLPFQ96A32 169 aa17.54■□□□□ 0.4
LINC00398-201ENST00000414407 VPS16Q9H269 839 aa17.54■□□□□ 0.4
LINC00398-201ENST00000414407 WDR6Q9NNW5 1121 aaKnown RBP17.54■□□□□ 0.4
LINC00398-201ENST00000414407 AVENQ9NQS1 362 aaPredicted RBP17.54■□□□□ 0.4
LINC00398-201ENST00000414407 PRKAG3Q9UGI9 489 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms