RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 RSPRY1Q96DX4 576 aa28.2■■■□□ 2.1
VEGFA-207ENST00000413642 MKNK1Q9BUB5 465 aa28.2■■■□□ 2.1
VEGFA-207ENST00000413642 MUC6Q6W4X9 2439 aa28.2■■■□□ 2.1
VEGFA-207ENST00000413642 TCHHQ07283 1943 aa28.2■■■□□ 2.1
VEGFA-207ENST00000413642 COL4A3Q01955 1670 aa28.19■■■□□ 2.1
VEGFA-207ENST00000413642 GOLGA6L4A6NEF3 574 aa28.19■■■□□ 2.1
VEGFA-207ENST00000413642 PHACTR2O75167 634 aa28.19■■■□□ 2.1
VEGFA-207ENST00000413642 WARSP23381 471 aaKnown RBP28.19■■■□□ 2.1
VEGFA-207ENST00000413642 CYP4F8P98187 520 aa28.19■■■□□ 2.1
VEGFA-207ENST00000413642 TRPC3Q13507 836 aa28.19■■■□□ 2.1
VEGFA-207ENST00000413642 DDR2Q16832 855 aa28.19■■■□□ 2.1
VEGFA-207ENST00000413642 WDR72Q3MJ13 1102 aa28.19■■■□□ 2.1
VEGFA-207ENST00000413642 SLC44A4Q53GD3 710 aa28.19■■■□□ 2.1
VEGFA-207ENST00000413642 VITQ6UXI7 678 aa28.19■■■□□ 2.1
VEGFA-207ENST00000413642 SPATA18Q8TC71 538 aa28.19■■■□□ 2.1
VEGFA-207ENST00000413642 ERCC4Q92889 916 aaPredicted RBP28.19■■■□□ 2.1
VEGFA-207ENST00000413642 PHOX2BQ99453 314 aa28.19■■■□□ 2.1
VEGFA-207ENST00000413642 SYT15Q9BQS2 421 aa28.19■■■□□ 2.1
VEGFA-207ENST00000413642 XYLT2Q9H1B5 865 aa28.19■■■□□ 2.1
VEGFA-207ENST00000413642 CRTAC1Q9NQ79 661 aa28.19■■■□□ 2.1
VEGFA-207ENST00000413642 TRAF3IP3Q9Y228 551 aa28.19■■■□□ 2.1
VEGFA-207ENST00000413642 GALR2O43603 387 aaPredicted RBP28.18■■■□□ 2.1
VEGFA-207ENST00000413642 CALUO43852 315 aaPredicted RBP28.18■■■□□ 2.1
VEGFA-207ENST00000413642 RFX1P22670 979 aa28.18■■■□□ 2.1
VEGFA-207ENST00000413642 PCSK1P29120 753 aa28.18■■■□□ 2.1
VEGFA-207ENST00000413642 BIRC3Q13489 604 aa28.18■■■□□ 2.1
VEGFA-207ENST00000413642 TMEM174Q8WUU8 243 aa28.18■■■□□ 2.1
VEGFA-207ENST00000413642 PRRX2Q99811 253 aa28.18■■■□□ 2.1
VEGFA-207ENST00000413642 FOXQ1Q9C009 403 aa28.18■■■□□ 2.1
VEGFA-207ENST00000413642 NXF1Q9UBU9 619 aaKnown RBP28.18■■■□□ 2.1
VEGFA-207ENST00000413642 H0Y858 1186 aa28.17■■■□□ 2.1
VEGFA-207ENST00000413642 C4BPAP04003 597 aaKnown RBP28.17■■■□□ 2.1
VEGFA-207ENST00000413642 HMGA1P17096 107 aaKnown RBP28.17■■■□□ 2.1
VEGFA-207ENST00000413642 PTPN5P54829 565 aa28.17■■■□□ 2.1
VEGFA-207ENST00000413642 CLDN10P78369 228 aa28.17■■■□□ 2.1
VEGFA-207ENST00000413642 TAF12Q16514 161 aa28.17■■■□□ 2.1
VEGFA-207ENST00000413642 GPR158Q5T848 1215 aa28.17■■■□□ 2.1
VEGFA-207ENST00000413642 FAM171BQ6P995 826 aa28.17■■■□□ 2.1
VEGFA-207ENST00000413642 SPATA2LQ8IUW3 424 aaPredicted RBP28.17■■■□□ 2.1
VEGFA-207ENST00000413642 GUF1Q8N442 669 aaKnown RBP28.17■■■□□ 2.1
VEGFA-207ENST00000413642 FAM86C1Q9NVL1 165 aa28.17■■■□□ 2.1
VEGFA-207ENST00000413642 LRRN2O75325 713 aa28.16■■■□□ 2.1
VEGFA-207ENST00000413642 VNN1O95497 513 aa28.16■■■□□ 2.1
VEGFA-207ENST00000413642 MLF2Q15773 248 aaPredicted RBP28.16■■■□□ 2.1
VEGFA-207ENST00000413642 C1orf220Q5T0J3 134 aa28.16■■■□□ 2.1
VEGFA-207ENST00000413642 PHLDB3Q6NSJ2 640 aa28.16■■■□□ 2.1
VEGFA-207ENST00000413642 TMEM150AQ86TG1 271 aa28.16■■■□□ 2.1
VEGFA-207ENST00000413642 MYLPFQ96A32 169 aa28.16■■■□□ 2.1
VEGFA-207ENST00000413642 GPR88Q9GZN0 384 aa28.16■■■□□ 2.1
VEGFA-207ENST00000413642 TRPV4Q9HBA0 871 aa28.16■■■□□ 2.1
VEGFA-207ENST00000413642 CDH9Q9ULB4 789 aa28.16■■■□□ 2.1
VEGFA-207ENST00000413642 MAGED2Q9UNF1 606 aaPredicted RBP28.16■■■□□ 2.1
VEGFA-207ENST00000413642 HEPACAM2A8MVW5 462 aa28.15■■■□□ 2.1
VEGFA-207ENST00000413642 KIF20AO95235 890 aa28.15■■■□□ 2.1
VEGFA-207ENST00000413642 DCNP07585 359 aaKnown RBP28.15■■■□□ 2.1
VEGFA-207ENST00000413642 CD72P21854 359 aa28.15■■■□□ 2.1
VEGFA-207ENST00000413642 GNL1P36915 607 aaPredicted RBP28.15■■■□□ 2.1
VEGFA-207ENST00000413642 STARD6P59095 220 aa28.15■■■□□ 2.1
VEGFA-207ENST00000413642 TNNC1P63316 161 aa28.15■■■□□ 2.1
VEGFA-207ENST00000413642 ARID3BQ8IVW6 561 aaPredicted RBP28.15■■■□□ 2.1
VEGFA-207ENST00000413642 SCN4BQ8IWT1 228 aa28.15■■■□□ 2.1
VEGFA-207ENST00000413642 OR6B3Q8NGW1 331 aa28.15■■■□□ 2.1
VEGFA-207ENST00000413642 LRRC3BQ96PB8 259 aa28.15■■■□□ 2.1
VEGFA-207ENST00000413642 TRMT61BQ9BVS5 477 aaKnown RBP28.15■■■□□ 2.1
VEGFA-207ENST00000413642 SNX25Q9H3E2 840 aa28.15■■■□□ 2.1
VEGFA-207ENST00000413642 DPEP3Q9H4B8 488 aa28.15■■■□□ 2.1
VEGFA-207ENST00000413642 ABCB6Q9NP58 842 aa28.15■■■□□ 2.1
VEGFA-207ENST00000413642 MTF2Q9Y483 593 aaPredicted RBP28.15■■■□□ 2.1
VEGFA-207ENST00000413642 TACC1O75410 805 aa28.14■■■□□ 2.1
VEGFA-207ENST00000413642 AKAP3O75969 853 aa28.14■■■□□ 2.1
VEGFA-207ENST00000413642 FGF19O95750 216 aa28.14■■■□□ 2.1
VEGFA-207ENST00000413642 STAU1O95793 577 aaKnown RBP28.14■■■□□ 2.1
VEGFA-207ENST00000413642 NR2F2P24468 414 aa28.14■■■□□ 2.1
VEGFA-207ENST00000413642 GDI1P31150 447 aa28.14■■■□□ 2.1
VEGFA-207ENST00000413642 PFKPQ01813 784 aa28.14■■■□□ 2.1
VEGFA-207ENST00000413642 FAM160A1Q05DH4 1040 aa28.14■■■□□ 2.1
VEGFA-207ENST00000413642 NCOA4Q13772 614 aa28.14■■■□□ 2.1
VEGFA-207ENST00000413642 TMC2Q8TDI7 906 aa28.14■■■□□ 2.1
VEGFA-207ENST00000413642 SYAP1Q96A49 352 aaPredicted RBP28.14■■■□□ 2.1
VEGFA-207ENST00000413642 SMG9Q9H0W8 520 aaKnown RBP28.14■■■□□ 2.1
VEGFA-207ENST00000413642 SMYD3Q9H7B4 428 aa28.14■■■□□ 2.1
VEGFA-207ENST00000413642 BRD9Q9H8M2 597 aa28.14■■■□□ 2.1
VEGFA-207ENST00000413642 HEBP1Q9NRV9 189 aa28.14■■■□□ 2.1
VEGFA-207ENST00000413642 FRMD4BQ9Y2L6 1034 aa28.14■■■□□ 2.1
VEGFA-207ENST00000413642 F11P03951 625 aa28.13■■■□□ 2.09
VEGFA-207ENST00000413642 PSMC3P17980 439 aa28.13■■■□□ 2.09
VEGFA-207ENST00000413642 ATICP31939 592 aa28.13■■■□□ 2.09
VEGFA-207ENST00000413642 RAP1GAPP47736 663 aa28.13■■■□□ 2.09
VEGFA-207ENST00000413642 NUBP1P53384 320 aa28.13■■■□□ 2.09
VEGFA-207ENST00000413642 AP3M2P53677 418 aa28.13■■■□□ 2.09
VEGFA-207ENST00000413642 CDH8P55286 799 aa28.13■■■□□ 2.09
VEGFA-207ENST00000413642 RPL10AP62906 217 aaKnown RBP28.13■■■□□ 2.09
VEGFA-207ENST00000413642 CFAP221Q4G0U5 840 aa28.13■■■□□ 2.09
VEGFA-207ENST00000413642 ZCWPW2Q504Y3 356 aa28.13■■■□□ 2.09
VEGFA-207ENST00000413642 ARHGAP15Q53QZ3 475 aa28.13■■■□□ 2.09
VEGFA-207ENST00000413642 CCDC105Q8IYK2 499 aa28.13■■■□□ 2.09
VEGFA-207ENST00000413642 DTWD2Q8NBA8 298 aa28.13■■■□□ 2.09
VEGFA-207ENST00000413642 SLC46A2Q9BY10 475 aa28.13■■■□□ 2.09
VEGFA-207ENST00000413642 TASP1Q9H6P5 420 aa28.13■■■□□ 2.09
VEGFA-207ENST00000413642 SIT1Q9Y3P8 196 aa28.13■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms