RNA–Protein interactions for RNA: ENST00000413473.6

TTC39A-208, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TTC39A, Length 2,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-208ENST00000413473 AP3M2P53677 418 aa15.76■□□□□ 0.11
TTC39A-208ENST00000413473 SLC18A1P54219 525 aa15.76■□□□□ 0.11
TTC39A-208ENST00000413473 GPX6P59796 221 aa15.76■□□□□ 0.11
TTC39A-208ENST00000413473 SMTNL2Q2TAL5 461 aa15.76■□□□□ 0.11
TTC39A-208ENST00000413473 KCNT1Q5JUK3 1230 aa15.76■□□□□ 0.11
TTC39A-208ENST00000413473 TLDC1Q6P9B6 456 aa15.76■□□□□ 0.11
TTC39A-208ENST00000413473 DHX37Q8IY37 1157 aaKnown RBP15.76■□□□□ 0.11
TTC39A-208ENST00000413473 FBF1Q8TES7 1133 aa15.76■□□□□ 0.11
TTC39A-208ENST00000413473 MAK16Q9BXY0 300 aaKnown RBP15.76■□□□□ 0.11
TTC39A-208ENST00000413473 ZNF518BQ9C0D4 1074 aa15.76■□□□□ 0.11
TTC39A-208ENST00000413473 ZWILCHQ9H900 591 aa15.76■□□□□ 0.11
TTC39A-208ENST00000413473 NRBP2Q9NSY0 501 aa15.76■□□□□ 0.11
TTC39A-208ENST00000413473 SENP1Q9P0U3 644 aa15.76■□□□□ 0.11
TTC39A-208ENST00000413473 PHIPQ8WWQ0 1821 aa15.76■□□□□ 0.11
TTC39A-208ENST00000413473 IGKV6D-21A0A0A0MT36 114 aa15.75■□□□□ 0.11
TTC39A-208ENST00000413473 PIAS1O75925 651 aa15.75■□□□□ 0.11
TTC39A-208ENST00000413473 EIF4BP23588 611 aaKnown RBP15.75■□□□□ 0.11
TTC39A-208ENST00000413473 SKIV2L2P42285 1042 aaKnown RBP15.75■□□□□ 0.11
TTC39A-208ENST00000413473 TAP1Q03518 808 aa15.75■□□□□ 0.11
TTC39A-208ENST00000413473 TARBP2Q15633 366 aaKnown RBP15.75■□□□□ 0.11
TTC39A-208ENST00000413473 PDK4Q16654 411 aa15.75■□□□□ 0.11
TTC39A-208ENST00000413473 HIF1AQ16665 826 aa15.75■□□□□ 0.11
TTC39A-208ENST00000413473 DUOXA2Q1HG44 320 aa15.75■□□□□ 0.11
TTC39A-208ENST00000413473 SGSM1Q2NKQ1 1148 aa15.75■□□□□ 0.11
TTC39A-208ENST00000413473 ZPBP2Q6X784 338 aa15.75■□□□□ 0.11
TTC39A-208ENST00000413473 TAB3Q8N5C8 712 aaPredicted RBP15.75■□□□□ 0.11
TTC39A-208ENST00000413473 ACTL9Q8TC94 416 aa15.75■□□□□ 0.11
TTC39A-208ENST00000413473 LRRC8CQ8TDW0 803 aa15.75■□□□□ 0.11
TTC39A-208ENST00000413473 ERP27Q96DN0 273 aa15.75■□□□□ 0.11
TTC39A-208ENST00000413473 L3MBTL3Q96JM7 780 aaPredicted RBP15.75■□□□□ 0.11
TTC39A-208ENST00000413473 C12orf42Q96LP6 360 aa15.75■□□□□ 0.11
TTC39A-208ENST00000413473 SLC24A2Q9UI40 661 aa15.75■□□□□ 0.11
TTC39A-208ENST00000413473 AGTPBP1Q9UPW5 1226 aa15.75■□□□□ 0.11
TTC39A-208ENST00000413473 CHKBQ9Y259 395 aa15.75■□□□□ 0.11
TTC39A-208ENST00000413473 C3orf70A6NLC5 250 aaPredicted RBP15.75■□□□□ 0.11
TTC39A-208ENST00000413473 TYROBPO43914 113 aa15.75■□□□□ 0.11
TTC39A-208ENST00000413473 MSCO60682 206 aa15.75■□□□□ 0.11
TTC39A-208ENST00000413473 TOM1L1O75674 476 aa15.75■□□□□ 0.11
TTC39A-208ENST00000413473 SRGAP2CP0DJJ0 459 aa15.75■□□□□ 0.11
TTC39A-208ENST00000413473 PSMA2P25787 234 aa15.75■□□□□ 0.11
TTC39A-208ENST00000413473 SSTR1P30872 391 aa15.75■□□□□ 0.11
TTC39A-208ENST00000413473 RFC5P40937 340 aa15.75■□□□□ 0.11
TTC39A-208ENST00000413473 GDF10P55107 478 aa15.75■□□□□ 0.11
TTC39A-208ENST00000413473 TFAMQ00059 246 aaKnown RBP15.75■□□□□ 0.11
TTC39A-208ENST00000413473 OTUD4Q01804 1114 aaKnown RBP15.75■□□□□ 0.11
TTC39A-208ENST00000413473 TRPC3Q13507 836 aa15.75■□□□□ 0.11
TTC39A-208ENST00000413473 MOGSQ13724 837 aa15.75■□□□□ 0.11
TTC39A-208ENST00000413473 SETDB1Q15047 1291 aa15.75■□□□□ 0.11
TTC39A-208ENST00000413473 ANKRD22Q5VYY1 191 aa15.75■□□□□ 0.11
TTC39A-208ENST00000413473 VSIG1Q86XK7 387 aa15.75■□□□□ 0.11
TTC39A-208ENST00000413473 NIPA2Q8N8Q9 360 aa15.75■□□□□ 0.11
TTC39A-208ENST00000413473 PSMC3IPQ9P2W1 217 aaPredicted RBP15.75■□□□□ 0.11
TTC39A-208ENST00000413473 TJP2Q9UDY2 1190 aa15.75■□□□□ 0.11
TTC39A-208ENST00000413473 ZNF112Q9UJU3 913 aa15.75■□□□□ 0.11
TTC39A-208ENST00000413473 USH1CQ9Y6N9 552 aa15.75■□□□□ 0.11
TTC39A-208ENST00000413473 CLUHO75153 1309 aa15.74■□□□□ 0.11
TTC39A-208ENST00000413473 C19orf81C9J6K1 198 aa15.74■□□□□ 0.11
TTC39A-208ENST00000413473 CST8O60676 142 aa15.74■□□□□ 0.11
TTC39A-208ENST00000413473 PEX10O60683 326 aa15.74■□□□□ 0.11
TTC39A-208ENST00000413473 KRT4P19013 534 aa15.74■□□□□ 0.11
TTC39A-208ENST00000413473 GBP2P32456 591 aaPredicted RBP15.74■□□□□ 0.11
TTC39A-208ENST00000413473 CTCFP49711 727 aaPredicted RBP15.74■□□□□ 0.11
TTC39A-208ENST00000413473 STAT5BP51692 787 aa15.74■□□□□ 0.11
TTC39A-208ENST00000413473 MSS51Q4VC12 460 aa15.74■□□□□ 0.11
TTC39A-208ENST00000413473 HHATQ5VTY9 493 aa15.74■□□□□ 0.11
TTC39A-208ENST00000413473 RGS9BPQ6ZS82 235 aa15.74■□□□□ 0.11
TTC39A-208ENST00000413473 ARFGAP1Q8N6T3 406 aa15.74■□□□□ 0.11
TTC39A-208ENST00000413473 NSMCE1Q8WV22 266 aa15.74■□□□□ 0.11
TTC39A-208ENST00000413473 LRRC37BQ96QE4 947 aa15.74■□□□□ 0.11
TTC39A-208ENST00000413473 MRPL4Q9BYD3 311 aaKnown RBP15.74■□□□□ 0.11
TTC39A-208ENST00000413473 FARP1Q9Y4F1 1045 aaPredicted RBP15.74■□□□□ 0.11
TTC39A-208ENST00000413473 CEP83Q9Y592 693 aa15.74■□□□□ 0.11
TTC39A-208ENST00000413473 SPDYE16A6NNV3 312 aaPredicted RBP15.74■□□□□ 0.11
TTC39A-208ENST00000413473 EDF1O60869 148 aaKnown RBP15.74■□□□□ 0.11
TTC39A-208ENST00000413473 UBA1P22314 1058 aaKnown RBP15.74■□□□□ 0.11
TTC39A-208ENST00000413473 CCND1P24385 295 aa15.74■□□□□ 0.11
TTC39A-208ENST00000413473 IL1R2P27930 398 aa15.74■□□□□ 0.11
TTC39A-208ENST00000413473 CDH5P33151 784 aaPredicted RBP15.74■□□□□ 0.11
TTC39A-208ENST00000413473 GMPSP49915 693 aaPredicted RBP15.74■□□□□ 0.11
TTC39A-208ENST00000413473 YARSP54577 528 aaKnown RBP15.74■□□□□ 0.11
TTC39A-208ENST00000413473 GEMIN4P57678 1058 aaKnown RBP15.74■□□□□ 0.11
TTC39A-208ENST00000413473 MTM1Q13496 603 aa15.74■□□□□ 0.11
TTC39A-208ENST00000413473 TFDP1Q14186 410 aa15.74■□□□□ 0.11
TTC39A-208ENST00000413473 FNBP1LQ5T0N5 605 aa15.74■□□□□ 0.11
TTC39A-208ENST00000413473 DENND1BQ6P3S1 775 aa15.74■□□□□ 0.11
TTC39A-208ENST00000413473 KIAA0319LQ8IZA0 1049 aa15.74■□□□□ 0.11
TTC39A-208ENST00000413473 JOSD2Q8TAC2 188 aa15.74■□□□□ 0.11
TTC39A-208ENST00000413473 PYROXD1Q8WU10 500 aa15.74■□□□□ 0.11
TTC39A-208ENST00000413473 CPT1BQ92523 772 aa15.74■□□□□ 0.11
TTC39A-208ENST00000413473 CAMKK2Q96RR4 588 aa15.74■□□□□ 0.11
TTC39A-208ENST00000413473 TXLNGQ9NUQ3 528 aa15.74■□□□□ 0.11
TTC39A-208ENST00000413473 HOXC10Q9NYD6 342 aa15.74■□□□□ 0.11
TTC39A-208ENST00000413473 RABGEF1Q9UJ41 708 aa15.74■□□□□ 0.11
TTC39A-208ENST00000413473 PCDHGC3Q9UN70 934 aa15.74■□□□□ 0.11
TTC39A-208ENST00000413473 FGFR1P11362 822 aa15.74■□□□□ 0.11
TTC39A-208ENST00000413473 KRT3P12035 628 aa15.74■□□□□ 0.11
TTC39A-208ENST00000413473 CD19P15391 556 aa15.74■□□□□ 0.11
TTC39A-208ENST00000413473 LACTBP83111 547 aaPredicted RBP15.74■□□□□ 0.11
TTC39A-208ENST00000413473 EFTUD2Q15029 972 aaKnown RBP eCLIP15.74■□□□□ 0.11
TTC39A-208ENST00000413473 PTPN20Q4JDL3 420 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms